Gene detail

Detailed information of ENSDTNP00000031653.1 in Metridium senile

Genomic Location: not available for this species
NR annotation: KXJ13769.1, ATP-dependent DNA helicase PIF1 [Exaiptasia diaphana]
Species Metridium senile · all data for this species · gene families

Sequence

CDS

ENSDTNT00000033067

ATAAAAATGTCATATGATCATAAACAATATATATGTAAAACCTGTCATTCTAAAGTTCTCAGACAACAAATACCATGCCAAGCTGTGTACAATAATTTACAAGTAGATGAAATCCCCCCAGAACTAGCTGTTTTAGGGAAACTTGAACAGATTCTAATTGCACAAAGAATAGTATTTGAAAAAATAGTCATAATGCCAAAAGGAAGGCAAAGAAAGATTAAGGGAGCAATATGCAATGTACCGGTGGAGTGTGATCAAACCTGTAATGTTTTGCCTCGTCCTTCTGAAAGATCTGGCATTATCATGTTAAAACTTAAAAGAAAACTTCAGTTTAGAGGACATGTTTACTATGAACCTGTTAGGCCTGAATTAATATTTTCTGCTCTCCAATGGCTAAAAATGAATAATCCATTGTATGCTGATATTGAAATTGATATGGAAAACAGCTATGAATatctcacttcaatgcaaaaTATCTCAGATGATCCTTTGAATGAGCACAGAACTCCAATAAATGAAACATGTTTACAGTCTGTTATACCTGACTATCATGTTGCAGTAGAGGAAAATCGTCCAGTAGCACTAGGGAATGAAATTCATGAAATTGCACCAGGTGAAAACAGACACCCTGTCTCATTCATGACAGATAAACTATGCGAAGAAATGGCATTTCCTGTATTGTTTCCTAAAGGTAAATTTGGTTATCATATTGACCGTAGTATTAAATTATCTCCTGTCAAATATTTCAATGCCAGACTACTACATTACAGTGGACGCTTTGCAACAAATtcagaatatttattttttgcacAGTTTGTTATTGAGCAAAAAAAGGTATATGATAGTATTAGCATTGctctgaaaaaaatacacagCCAACCCATTTCTGCTTCTCAATTGAGATGTAATGCACAAAGTTTGCAGAACCTGATTTGCCAAGACCAAGCTTACTTATTTCTCAGACAAATTCCAGGGACACCTCCTTACTGGCAGAAATTTATGTATGAAGTTGTTGCTATGGTAAAACAACTTGGAATCCCAACATGGTTTATGACTTTATCCTGTGCAGATCTCAGATCGCCTGAGTTGTTTCAGATTATAGCCAGAACACAAGGCAAAAACATCTCGAATGAAGAAGTAGATGCCCTCTCTTACAATGAGAAATGTTCAATGTTAAACTTGAATCCTGTAGTTGTTGCTAAGCACTTCCAATACAGAgttgaaacattttttacagaaGTTCTACTCTGTAATGCCAACCCAATTGGTAAAATCATTTACTATGCATTGCGCATTGAATTTCAAATGAGAGGATCACCCCATTTACATGCTTTAATATGGACCTCAGATTGCCCAAGGTTAAGTACAGACAACAAACAGGCATATGTAGACTTTATTGACAAGCATGTACAGGCCTACCTACCAGATGAGAATCAAGATCCTCATTTACATGAATTGGTCAAAACCTATCAAAAGCACAGTCATTCTAAAACATGTAGAAAATACAAGAATATTCGCTGCAGATTCAATTTTGGACAATTCTTTACAAATAGGACTATTGTAGCTGAACCTCTATCTGATGACATAAATGAAGACATAAAAAGCAGTACTCtcgaaaaaagaaaagaaattctCACATTAGTGAAAGAGAAGATAGATGATGTACTTAATCCAAGTAAACCAAACTATGACTCTACACTGACAGAATCTGATATTTTCAACTCTATTGGTATAACAGAAGAACAGTATTACAATGCTTTATCTATTTCACCAGACTCAGACTATGAATTACATTTGAAAAGACCAATAAACAgctgttttattaataattacttTATAGCTGGAATAAAAGGATTTGCTGCTAATGTTGATTTACAGCCAGTTTTTAATCATTACAAGTGTGTAACATATGTATGTTCATACTTTACTAAAGACGAGACAGAATGTTCTCAAGCTATTATGAATGCTGCAAATGAGGCTAAAGCTGCCAATATGAATGTGAGAGACGGATTGAAAAAAATTGGTGCTGCATTTCTGTCTACTAGGGAAGTTAGCTCACAAGAGGCTGTATACCGTTGTATGCCTGAACTTTGGCTGAGGAAAGTATTTCCCGCTGCAATCTTTGTCAGCACTGACTTACCAGACAAAAGGATAAGAATGGCAAAATCACAAAAAGAACTTGAAGAACTTGATGATGAAAGTACAGAAGTGTATAAGTCAAACATAATAGAACGCTATACTAAAAGGCCTTACTCAATCCCTTCTGTAAATAACTTATGTCTGGCACAGTTTGTAGCTTATTATTACAAAGATTATAAGAAGGAATGTCAAGAGACAACTGATGCACAACCAGAGGTCCTTACTGACAACCTGATTGAATCACAACATACTACAGAAAATGAAGACTCTTCACTTCCAGACAAAATAAGATTAATAGATACTAATGAGATGATGAAACGCAGAAAAGTCAAGGCTGTCATAAGATATCACACACCAAACAAGCAAAAAGAACCTGAGaaattttttcatcatttacttATGCTTTACTATCCATGGAGAGATGAAAATAAACTGTTAGCTAGTGATGGTACATATGCAACTACATTTAATGACCCTGATAAACAACCCATAGTAGAGCATAATAGGTCTATTTTTGAACCTGATACAGATGCTGTAACTGAGGCACTTGAAAATCTAAGAAACAATCAAGGTAACATCCATTGTTATGATTCTATGAATGATCAAGAAAATGACGATATTCACTCTCAGTTAGAGGAACAAACAGATGCTGAAGAATCATTTAATGAACAAATACCTTCACATCTGTCTTCATCTCCTGAGTCTAATAATCATCAAGCCTCAGCAATATCTCGATATACCCGACCTACAGATATGACTGATCATGAACTGCGCCATTCTGTGAGATCCTTAAATAAAAGACAGCGATATACATTTAATCATGTTCTGACCTGGTGtagaaataaagtaaaaaatatcaattgtaGTAAACCACAGGATGTTGAACCAATCTATATTTTTCTCACTGGAGGTGGTGGAGCTGGCAAGAGCCACTTGATTAAAACAATATATCATACTGTTACCAAAACATTTAGACATGTAGCTGTTAATCCTGATTTACCATCAGTTCTTTTAATGGCCCCAACTGGTGTTGCTGCTATCAATATTAATGGCACTACTATCAACACAGCTCTAGGTATTCCAAAAGAAGCAGGTTCTACTTTAAAACCTCTTTCAGACCAAAACAGAACACAATTGAGACTCTTCTTATCTGAACTGAGACTCATAATAGTAGATGAGATTTCAATGGTTGGTAATACTACACTACTCCATATCCATCAAagattaaaagaaatatttgacaCACCTGCCTCTAAGCTATTTGCTGGGATAAGCATAATTGCAGGAGGAGATTTTTATCAGTTACCACCAATAAAGAAAAAGCCAGTATTTGAGAATTTTAATATTGATACATATAATCTGTGTCACCCCTGGCATCTTTTTAGAATGGCAGAGCTTATTGATAATATGCGTTCGAAAGATGACCAACcatttgttgaaatattaaACAGATTTCGTACTGCTTCCCAAACAGAAGAAGACATTAAACAGATTCAGTCTCGATCAATACATCCAGATGATGAAAATTATCCATCAGATGCTATACATATACATGCAGAAAATAAACCTGTTGatcaacataataataacaaactaaCTCAGTTACCAGGACCAATCTTTCAGCTTAGAGCAACAGATCAGTATCCTCCAAATGTATCTCAAGCTGATATTGACAGAGTATTATCAAAAGGACGTTCTGATACTGGTGGACTAGATTATGACATAAATGTCAAAGAAAGTGCAAGAGTTATGTTAACAAGCAATATTGATATCGCAGATAGACTTATCAATGGTCAAATAGGTACTATCATTAAAATCCATGTTAGCCAAACCACACAAAAAACAACTGTTATTTACATTAAATTTGATGATGATCAAGCTGGCAGAAATGTGATCATTAAATCGACCAATCAATTTGTTAAAGAAAACAATGTTGTACCCATTGAACCAATTCTAGCTAAAATCAAAATAAGGCCTGGTAAACCATCCTCACCACAAATTCAAAGAGTCCAATTTCCTATTACATTAGCCTATGCAGTCACTATACATAAAATTCAAGGGCTCAGTCTTGACAAGGTTGTAATAAGCTTTGAGTTATTCAGACAGAGGTCATTTAACTATGGACAAGTATATGTTGCCTTAAGTCGCTCACGTTCCTTAAATGGTCTGTACACTTTAGGTCAAATAGAAGCTAAACATGTCAGAGCAGATCCAAGGGTACATAACGAATATCAGAGATTACGAGAAACACTACCACTTGAGCCACCAATAGCTTGTCAAGAAAACATTTCAACAATCACTATTTGTCTTTTAAATGTCAGGTCCTTGCAAAAACACAGTGTTGATATAAGACATGATTCAAACTTATTTGATACTGACATGATATGCCTTACAGAAACACAATTATTACCTAGCACcgatgataatgaaataaaaaccaCTCTACATCCCTTTACACTACTCAGGCAAGATCACACTTCAGATAGGTATTCCAGTTTAGCACTATGTTCAAAATCTCATCTTGAAATCACAGAATATCACTACTTTGCCGAAATAAATGCAATAATATTCTCTGTTATTCATACTATAATACCACAGCTAAACATCAAAATACTTTTACTGTATCGCAAGAATGGTCGCATTATTTCTcaatatatacaaaatttagaaaatatattaaacagATTTAAAATTGATATTGTTTTTGGAGACTTCAATATAAACTACCTTAATCATAATGAAATTCAGACACTCAATACTAGTATGGAACAATTAAGTTATACACAAACAGTTCAAGGTCCAACATTTGTATCAGGAAGTTTACTAGACCATGTTTATATAAGAAATGAAATGTGGAACTTAACTGATATTTGTACATCTATAGTACCAGTATATTACTCTGATCATGAAGCAATTAAAATCTCTTGGTCAACAATCAAGGTATTCAAGTGCAAACTGAGCGCAGAAAAAAGGGCATATATAGGCTATCTGTTGAACGATAAGGGGTTTACCGTAAATGAAATATGTAAAAAGGCAAAAGTTTCAAGGGCCACAGTTTATCGATTGAAAAATGACAAGACATGGATGGAAAAAAAGGCAAAGGCTAAGAACATCAATGGAAGACAAAGAAAAATAACAGACCGCGGTAGTAGACAGCTACTGCACAAGGTCAGTTATCTAAGAACGCAAATGGGGAGATTTCCTTCAAGACGCCTAATGAGAACTGCAGGACTTTCCTTAAGTGACGTTAGTGATAGGACAATACGTCGTTGCTTGAACAGGCATGAATACTATCACCTCCAAGCGCGAAAGAAAGGACTGATGTCCCGTGCGATCAAGACAAAAAGGGTGGCCTTTGCAAAAAGAATGGATGCTAAATACCTGCCAAATTTTTATAGTGTTCTATCAGATGGATCAACCGATGTAGCAATCACAGAGAAAGAAGCTATTTTTGTCCAGTACTTAAACACCAATCCAGCAGGACGAGATACTGTTCAAGTTGCAACTTCATTTCTCAAACTCATAGACTTGAAAGACGGCTCTGCCGTTGGCATTGTGCAATCAATCAAGAACAGCTTCCAGAACATTGGCATCGATGATAATAGTCTACAGAAGAAATTGATTGGTTTTGCGGCTGACGGAGCGAGTGTAAATCGTGGTGCGAGAGAGGGCGTTATCGGGATCCTACAACGAACTCAACCGTGGATAATATACGTGTGGTGTGTGGCACATCGTCTTGAACTATCTCTCAAAGACGCACTACGCAATTCCTGCTTTCAAGATGTAGATGAGATGCTTTTACGCCTATATTACCTCTATGAAAACTCGCCAAAGAAACTGCGGCAACTCCGTGAGCTGCACAGCGTTTATGATGAAACGTTTGAGTTTGAAGTGGGTGGTGTCCGACCGAAACGTGCATCGGGTACGCGTTGGATAACCCACAAAATCAACGCTTTGCAAATGGTGGTGGATAAGTATGGCATATACATCCAGCATATTGAAAACATGACAGAGGATGCGTCATTTAAACCAGCTGACCGCCAGAAGTTCAAGGGCTGGTTGAGGAAATGGAAGCAGGCACGTACTCCACTTCTATCCTGTCTGTTCATCGAAATACTAAGTCCAGCAAATAACCTTTCCTTGGCATTTCAAGAGGAGGCCATCGACATCGTGTCGTCAATCGCACACATCGAGACAGCTAAGAAACAGCTCGCGCGAATTGAAAAGAAGGAAGTCGAGGAGTTCCCAACAATTCAACGCTTTCTTGGGAAAGTAGAAGAGAAAGACGGGACATTCTACTATCAGGACGTTTCGATGCTCTCATTTAAAACGGCCAAAGAATCATTGGCATCTACAAAGACGGAGCTGGTAAGGAAAATAAAAGTGGCTATGGAAGCGAGGCTTGATGTTGCCGAAAACGAGCACGTACAGAGTGCTGCAACGATTCTCAACACAGAAGGTTGGGAGCGAAGAGACGAGGAAGGCGAAGAAGATATATCCTTTGCTGACGATGAACTGACAGAGCTGGCTGAACATTTCAAAGAGCCATTATCAAATGCTGGAATGATTTGCTCCTTGAATGATCTCCTACAGCAATGGCACAGCCTTGTTCAATATACAGTGCGTTATCTAAACCCTTCAAGGACGCCATACCTGCGTGTATGGAGGCGCATCCATGATTCACAACTGAGAAAAGAGTGGAATATGATCCTTATACTTGTTGAACTCCTCTTTGCAATTCCGATCTCTAACGCAAAGGTGGAGAGGCTCTTTTCTTATATGAAGAGAATCAAGACGGATTCACGAGCTTCCCTTGGCGAAGACAGGCTAAACAGCCTTATACGGATAAGTTCCGAGGGACCAAAGGCCGACTTCGACCCATTACCTGCCATCAAGCTATGGGCTTCAGCCTCGCATCGTCGCCCGGtacaaaagaagaggaaaatgTACAAACAACGCACCGGAAAACGTGCTAAACCAAGAGTGCTTATAGATCATCCCGTATCAGAGGCGGAATCTACAACAGACGAAGAAAGCACTGATACTGAGAGGGACATTATTCCCGAGCTCCAGGAACTAGATTAA

Transcript

ENSDTNT00000033067

Protein

ENSDTNP00000031653.1

IKMSYDHKQYICKTCHSKVLRQQIPCQAVYNNLQVDEIPPELAVLGKLEQILIAQRIVFEKIVIMPKGRQRKIKGAICNVPVECDQTCNVLPRPSERSGIIMLKLKRKLQFRGHVYYEPVRPELIFSALQWLKMNNPLYADIEIDMENSYEYLTSMQNISDDPLNEHRTPINETCLQSVIPDYHVAVEENRPVALGNEIHEIAPGENRHPVSFMTDKLCEEMAFPVLFPKGKFGYHIDRSIKLSPVKYFNARLLHYSGRFATNSEYLFFAQFVIEQKKVYDSISIALKKIHSQPISASQLRCNAQSLQNLICQDQAYLFLRQIPGTPPYWQKFMYEVVAMVKQLGIPTWFMTLSCADLRSPELFQIIARTQGKNISNEEVDALSYNEKCSMLNLNPVVVAKHFQYRVETFFTEVLLCNANPIGKIIYYALRIEFQMRGSPHLHALIWTSDCPRLSTDNKQAYVDFIDKHVQAYLPDENQDPHLHELVKTYQKHSHSKTCRKYKNIRCRFNFGQFFTNRTIVAEPLSDDINEDIKSSTLEKRKEILTLVKEKIDDVLNPSKPNYDSTLTESDIFNSIGITEEQYYNALSISPDSDYELHLKRPINSCFINNYFIAGIKGFAANVDLQPVFNHYKCVTYVCSYFTKDETECSQAIMNAANEAKAANMNVRDGLKKIGAAFLSTREVSSQEAVYRCMPELWLRKVFPAAIFVSTDLPDKRIRMAKSQKELEELDDESTEVYKSNIIERYTKRPYSIPSVNNLCLAQFVAYYYKDYKKECQETTDAQPEVLTDNLIESQHTTENEDSSLPDKIRLIDTNEMMKRRKVKAVIRYHTPNKQKEPEKFFHHLLMLYYPWRDENKLLASDGTYATTFNDPDKQPIVEHNRSIFEPDTDAVTEALENLRNNQGNIHCYDSMNDQENDDIHSQLEEQTDAEESFNEQIPSHLSSSPESNNHQASAISRYTRPTDMTDHELRHSVRSLNKRQRYTFNHVLTWCRNKVKNINCSKPQDVEPIYIFLTGGGGAGKSHLIKTIYHTVTKTFRHVAVNPDLPSVLLMAPTGVAAININGTTINTALGIPKEAGSTLKPLSDQNRTQLRLFLSELRLIIVDEISMVGNTTLLHIHQRLKEIFDTPASKLFAGISIIAGGDFYQLPPIKKKPVFENFNIDTYNLCHPWHLFRMAELIDNMRSKDDQPFVEILNRFRTASQTEEDIKQIQSRSIHPDDENYPSDAIHIHAENKPVDQHNNNKLTQLPGPIFQLRATDQYPPNVSQADIDRVLSKGRSDTGGLDYDINVKESARVMLTSNIDIADRLINGQIGTIIKIHVSQTTQKTTVIYIKFDDDQAGRNVIIKSTNQFVKENNVVPIEPILAKIKIRPGKPSSPQIQRVQFPITLAYAVTIHKIQGLSLDKVVISFELFRQRSFNYGQVYVALSRSRSLNGLYTLGQIEAKHVRADPRVHNEYQRLRETLPLEPPIACQENISTITICLLNVRSLQKHSVDIRHDSNLFDTDMICLTETQLLPSTDDNEIKTTLHPFTLLRQDHTSDRYSSLALCSKSHLEITEYHYFAEINAIIFSVIHTIIPQLNIKILLLYRKNGRIISQYIQNLENILNRFKIDIVFGDFNINYLNHNEIQTLNTSMEQLSYTQTVQGPTFVSGSLLDHVYIRNEMWNLTDICTSIVPVYYSDHEAIKISWSTIKVFKCKLSAEKRAYIGYLLNDKGFTVNEICKKAKVSRATVYRLKNDKTWMEKKAKAKNINGRQRKITDRGSRQLLHKVSYLRTQMGRFPSRRLMRTAGLSLSDVSDRTIRRCLNRHEYYHLQARKKGLMSRAIKTKRVAFAKRMDAKYLPNFYSVLSDGSTDVAITEKEAIFVQYLNTNPAGRDTVQVATSFLKLIDLKDGSAVGIVQSIKNSFQNIGIDDNSLQKKLIGFAADGASVNRGAREGVIGILQRTQPWIIYVWCVAHRLELSLKDALRNSCFQDVDEMLLRLYYLYENSPKKLRQLRELHSVYDETFEFEVGGVRPKRASGTRWITHKINALQMVVDKYGIYIQHIENMTEDASFKPADRQKFKGWLRKWKQARTPLLSCLFIEILSPANNLSLAFQEEAIDIVSSIAHIETAKKQLARIEKKEVEEFPTIQRFLGKVEEKDGTFYYQDVSMLSFKTAKESLASTKTELVRKIKVAMEARLDVAENEHVQSAATILNTEGWERRDEEGEEDISFADDELTELAEHFKEPLSNAGMICSLNDLLQQWHSLVQYTVRYLNPSRTPYLRVWRRIHDSQLRKEWNMILILVELLFAIPISNAKVERLFSYMKRIKTDSRASLGEDRLNSLIRISSEGPKADFDPLPAIKLWASASHRRPVQKKRKMYKQRTGKRAKPRVLIDHPVSEAESTTDEESTDTERDIIPELQELD

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P38766	ATP-dependent DNA helicase RRM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RRM3 PE=1 SV=1
Q0R4F1	ATP-dependent DNA helicase PIF1 OS=Xenopus laevis OX=8355 GN=pif1 PE=2 SV=1
Q7ZV90	ATP-dependent DNA helicase PIF1 OS=Danio rerio OX=7955 GN=pif1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000138 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20209 all species →	DUF6570	Domain of unknown function (DUF6570)	Domain	Interproscan
PF14214 all species →	Helitron_like_N	Helitron helicase-like domain at N-terminus	Family	Interproscan
PF03372 all species →	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF05970 all species →	PIF1	PIF1-like helicase	Family	Interproscan
PF02796 all species →	HTH_7	Helix-turn-helix domain of resolvase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR046700 all species →	Domain	Domain of unknown function DUF6570	Interproscan
IPR051055 all species →	Family	PIF1 DNA helicase	Interproscan
IPR025476 all species →	Domain	Helitron helicase-like domain	Interproscan
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR010285 all species →	Family	DNA helicase Pif1-like	Interproscan
IPR006120 all species →	Domain	Resolvase, HTH domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47642 all species →	ATP-DEPENDENT DNA HELICASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0000723 all species →	Biological Process	telomere maintenance	Interproscan
GO:0003678 all species →	Molecular Function	DNA helicase activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0000150 all species →	Molecular Function	DNA strand exchange activity	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006310 all species →	Biological Process	DNA recombination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDTNP00000031653.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.