Gene detail

Detailed information of ENSDTNP00000032178.1 in Metridium senile

Genomic Location: :...
NR annotation: XP_020892038.1, uncharacterized protein LOC110231362 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSDTNT00000033638

ATGTCCTGTTCCCAACCAAGTGAATCAGAACTTGAAAAGCTCAAAGAAAAGCTCCAAGTTGAAGGAATAGTACAGTGCCCAGTAAATGGCTGTGCAGAGACTTTCAAATCTATCTGGGGTCTTCGGTTCCATTTGAAAAAGAACAATTGCAACGCTCCGAAATTCAAATGTGAAAAGTGCAATGGGACATTCCGTTCTCGTATTATACTGCAACAACATCTAACTTCTTGCACTGGTGAAGATAGTTTTAAAGAGAAAGTAATTAGCAACGAAACGCACGAAAAAGATGTGACAGTGGGGCCAGAACGACCAACAATCAAAGAAGATAAAATACTCCATGATAATGAAATATCAAAAGTTACAGGAAGTTCCCAAAAAGACCAAAATAATGTACCTTTTGCTAAACCTATAACAAAAACTTCTTCAAATGGTTCAAATAGCTcaaaaacgcaagaaaaaagttTAGAAACTTCTAATAACACTCCAAGAGGATTATCTAAAAGTCTGGAAACTGATTCAACTACTGTTTTTATTCCTGGGTCTATAAAAGCAACTGCTTTAGATAGCTCAAAGATCTCTTCTAAAGAAGAAATTACTGAAATTTCACCAACCAAAACCTCTGAGCATTTGAGCTCTTCTACAAAAGAACAAAGCACTGCAAAGCAAGGAGATGAAACTCCTAAGAGAAAAAGAGGAAGACCTAAGAAAGCAATATCCCAAGATTGTAGTCAAGGAGGTGTTGTGACACCCAAGGCAAAACCAGCCAAGAAAAAAACAAAGCTAGAAACACCCAAAAATATAGAAAGTACTCCTTCAAGAAAAAGCTCAAGGTCAACAGGAAAGAAAGTTAACTATGCTCAACTGGAtcaaagtgatgatgatgatgaagatgaagaagatgatgatgaagatgaagatgatggagATATTGAACCATCAAAACCCAAGAGAGGACGACCAAGAAAAACTCATGttactgataatgatgagacGCAAAGTAACACTGATAATAAAACAGATGAGAATGTGGGGACAAATgttattgaaaatattgataacaGCACCAGTGAAAAGGACATTATAGAAACACCTGCCAAAACACCTACAATCAAAGAAACCCCTACTAAAACACCTACAATCAAAGAAACCCCCACCAAAACACTTACAATCAAAGAAAAACCTTCCAAAACACCTACCAAAaggaaacaaaaaaagaaagtttTATCAGAAGTAAGAGTTTtacattattgttgttgttattttaatgaaacaaatGAAGAggttttaaaaaggaaaacaaaacgTGGTCAAATTATTAAGTGTGCCAATGATTGTGGCAAGAGATTCACAACGTTTCTTGGTTACAAATCTCACATGAAATTATGTGGGCAGAAAGAAAGGAAGACATTTAACTGTGAAATATGTGGTAAAGAGTACCAATCAGAACCAGGACTAAAATATCACATGAAGGCTGCACATGAGAAAAAGCCAATACAAGAAACAGTGATTGAAGAAGATAACAGCAATGATATATCAAATATTGATAGTGGAGTAGATGCTCCAAGAAGAATGAGACAGGCTGCAGCTAGGGCAATGAAGAAGGTTCATGATCTAAAGAATGACAAGATAATTGTGGAAAAAGCAGTAATAGCATCTCATAAAAAGAGTGAAATCCTTGATAGCTATATAATAAAACTAAGAGATGGAATGGTAACTAATGCCATGGTAGCCAAATGGAAACAAGATATTAAAACAAATGGCAAATTGGTATGCCCTAATGAGCATTGTGATGAAGAATTCACCTCATCCTTTGTGTTGCAAACTCACTTTCTTCAATGTGGGTTCGACAATGCCCCATATAAATGCAATGAATGTGAAAAAGAATTTTCGACCATTAATGGTGCCAGATATCATATTGAGAATTTTCACCAACAGCaagatgtagatgatgatgacagcgacAATGATGAACTGTACTTTGATGAATATGAAGAGGATtctgaagatgatggtgatggtgatgatatctcAATAAGCGATATGGAAAATGAGTTGGAGGAATCAAAAGAcacaagaagaaaagaaagaagtaaatttccttttttattttcttcttttaatagaaaaaaaaatgagcAGGATGACTTAGTGATTTGCATTGGTCACTTTGTAATGAGTTTTATTTGTTTCTATTATTATAGCAACATTTCAGAATACATTCCCATCTCAACATCATCACCTCGTTTTATCATCCAACGACCAAACAACAAGACCAATGCTGACATGGATGATAGTCAGCTGCCTTTGTTTACTAGTTTGGACAAGAATGACAgTGGTAACTATGGTGATCGTATATTTTACACAGGGGGACCAGTCTGGGGACTTGGGTGGTGCCCTACCCTTGAGAAAGGCATCCTGCAATTATGGAATATAGGACCCTTGGCGAATAATTCATCAAGgTCAGGCGAATCTCCTAAACTGGCTCTCTGCATTGCACACAACTTTGGTCCAATATTTAAGATGGCCTGGTGTCCCTATGGTGTTTGGCATACCCCTGATACACAAACTGATGATAATTCCATACCAAGACTGGGTCTTTTAGCCCTTGCTTGTGGCGATGGCCTTGTACGAATCCTGAGTATACCACACCCTGACAagttgttgtccaagttaccaGCTTACTCAAGCAAAACTGATCAAGATAAAGAATTCAATAAAGTAATGGTACATGGTACATCTCAAATAGATCTGTTCCCTTGTCCCCTTAACATCGACTACGATGGTCAGCGGGGTATGGCTATGTGTGTAGACTGGTCTCAAGTCAAACCATTCCATTGTATCGCATTTTGGCCCCTCTGTGGTCCTAGCGAGGTAGACGGTAgGCTGGCACCATATATACTTATGAATGCTCATTCATCTCTGGTTCGTGGAGTAGCTTTATGTCCATCAAATCAAGACATTATGGTCACTGGTAGTGAAGAAAGGTGTTATAAGATATGGGATCTAAAATCGACGTCTGTACCAATGGTGGTATTGAAAAAAGGATATCCATACGAGCTGGAGTGGCCGTTACACACTCGTGGGTTTTTGTACTGTGAGCAGGAGCTATATAGTAAAGAGCAGCCATCAGTACGATATTGTAATATCACAACTGTCGATCATGTCCGGGCTATGTGTATACATGCAAGTGGTATATGGTCTTTATCATTCAATCAGTGGCTAAAGATTGCAGCAAGTGCTGATATTGCTGGTGATGTTTATATTTCTAAAATCCCACCGAAAAGCTCTACGACAAAATGGCCTCTTTACAAAACTCATTTAGAAGATCGTAACTCTAATACCGAGAATAACGGCAATGATAACAACCAAGATGAAAAACACGAGAAACTAAAACAAAGATCTCCAAGTCTGGAAGAAACTATAGGTTCCTCTCGCCTTGTTTTTGAAGATAGAAATCTTTTACAGTTCCAAAATATGATTCCTTCGAACTACAAAGACTTGTCAGAGAATCCATCGACGTTCAGTTGTAACACCTCCACATTGCAATCTGTTCATAAGGTTCGATGGAATCCCAACAAGCAAGCTATGACGTGGATCGCTTCAGGTGGAGCCTCAGGATTGGTCAGATTACATCACGTGAAAGAAGCCAAGTCGCGTGAACCTATTCCTGTAGACTGA

Transcript

ENSDTNT00000033638

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02178	AT_hook	AT hook motif	Motif	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR017956	Conserved_site	AT hook, DNA-binding motif	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR052416	Family	General transcription factor 3C component	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15052	RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR COMPLEX SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000127	Cellular Component	transcription factor TFIIIC complex	Interproscan
GO:0006383	Biological Process	transcription by RNA polymerase III	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15200	GTF3C2; general transcription factor 3C polypeptide 2	-	Transcription machinery	ko03021	deepkoala