Gene detail

Detailed information of ENSDTNP00000037424.1 in Metridium senile

Genomic Location: :...
NR annotation: XP_020916989.1, pre-mRNA-splicing factor PRP46 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDTNT00000039241

aatttttttgtcaAGTTCATCATTTGCTGACAGAAGTAGCGGAGTTTTTGGAGTCATATTCTGCAATAACGTTGTGTCTTTTCAACCAATTTTCTACTGTTTCGTACCTGATGGAGTTTGCTTATTAACAATCGAGACACTACACTGAAACTATGGGATGCTGACTCGGGCGATGAAATACGTAGTATGGGAGGTCATACCGGCAGTGTAACGTCAGTCAAGCTAATACCAAATATAGACATTACTTTGGATGAAGAAGAGCCTTCACTATCCAAAGGTTTTCAACACATGGCTATCACCGGTTCTAAAGACTGTTCAATAAGGCTGTGGTCACTAGGAGACGgTCAAATGCGCAAGTCAATCTACACATACTCATCGGTGGAGTGCTTGGATTACAACAAGAGAAACATAGCGTCAGGATCAGAAGGAGGAAAAGTAGAATTATGGGATGTCAACACGGGTGGTAATGTTCGATCAATCAAAGGTCATGAAGATATCGTAACTTGTATCAAGTTTCAAGACGACGGTCGTGTGGTCAGCGGTTCTATGACAGGGGTGGTCAAAGTGTGGGACATCCGGGATCCTTCATTGCGACCACTTTTTGATTCAGGGGAGTCGGACATCGCTTACAAAAAGAGACAAATTAGATCATTGGCTACTAGAGGGGATACCATTTATTGGGGAGATGATGGCGCCAATATTAAGGTCTTGGATTTAACTTCTGGTAAACTTCGTAAAATTCGTAACCATGAGAACGACTTTGGTTCCACTAACGCCATGACGTCATTAGGGTCTTGTTTGATTAGTTCTGgatatgatattgataatggaaCTGGATATATGAATGTTCGAAGTTTACCAGATGAAGGATACATTGCTACTATCAATGATAACAATACCGGTTGTATAACCTGTTTATCCTGTTCTCAAGTCAAGAAAGACGGTCAAACACTAAACAGGCTTTGTACTGGTGGATCTGATTTGAAACTATGGAACCAACTACCACAAAGAGCAAAGAAACGAACACGGTCTGAATCGGAAGACGGTTTTGTATCAAGCAAACATATACGACGATACAGCCAATCCAGCTTGAGTGACACTGAAAGtagtgaagatgaagatgatgatgatgaaccacgtcatgatgatgatgatggcgatgaggATGATGGCCCTAACAACGCCACTGGATCGTGGTGTACAATAAGCTAAACATGTACTGCGGGCTCAGGATGGTTATTGCACTTCACGTCATAAGAATATGATAATTAAATGTGATGATACCGCTGACAACGTGGTCTACAATATTGCAGGCTCAGAGATTTTTAAATGTCAGGAAAGCATTGGTGAAGATGACGCATATGATGATAATTGTCCTGATGTTACCGCTGTACAATGAACTTCAGTTAagtacagccaatcagagataTTCTACTTCTTACAAGAAAAATAGAATcaattttttaaaatttaaacattttcattttcaaaggAAATTTCTAACCTAGTTCAGTTGTGGACCTCTTCTTTGCTATATATAGCTAATGACGTTGGAAAATGACGTACAATCCAGCTATATCTGGTGACATCATTTTCTAAAAATAACTCCGATGTTCGAAAAAATGATGCACTGAATCAATCAAGGTTTTGCTTAGGGTAGGGAGGGTGGGGAGAAAAAATGGCATATTCCAAGAATTACTACAATTTATGCAGCCAATTCTTCCGTCGACGAGTTATTAAGGCCTGTTTACaatagcaattttgtcgcgcgacaagagctgcgatttcaagggcgattttatcgcagatttgctcgaaatttagtgcaatttgccgcgactttctgtctcctaaattcgagcgtatgaaatcgccgctcttgtcgcgcgacaaaattgttggtgtaaacgggcctttagactgcgtcacatccggacgtTTCCAACCGAGGAAATGCCCAGATCTGACTCAGGCTACGACTTGTTTGAATCTATcactttgggattcctgtgtattATTACCGGGGAGGACTGAAACGAATTTTCTGCACGGGTCCGAGCGCCACTCGGTCAAGAGTAAAGTAGATCAATAATACATTTAAATATCAGACacttttattgtattttattgtaaacaaaAAAGCATTTTTGTGATATTATAGTTTCTCGTGTGTTCTTATTCAGTGCTGAGCCTATCATCTACCAGGTACAG

Protein

Uniprot

Gene family

Uniprot term	Description
Q9SYX2	Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana OX=3702 GN=SPA1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR053299	Family	ASTRA complex-associated WD repeat	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44156	SUPERNUMERARY LIMBS, ISOFORM B-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan