Gene detail

Detailed information of ENSEWQP00005010159.1 in Acropora spathulata

Genomic Location: :...
NR annotation: XP_029198806.2, hydroxyacyl-coenzyme A dehydrogenase, mitochondrial-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSEWQT00005014716

ATAGGCAAACTCGGGACTTTTTTGGTTGTCCTATGTATCCATGGACCTTGATCTCTAGCCCACTCCTTCTCGCAATTCTTCTACCTAAACTCTTTCGTGACCATTTGTACGTGCGAAAAGATGGCTTCTATTTTCCACAACACAGCCTCAAAATTGGCTTCTTTTCAATATCTGACACGTTCCACATTTGGCAAAAACATACCCGCACTTTCTGCGTTCTTTAGTACGTCTTCCAGCCGCGGAGCCATAAAAAATGTCATGGTTGTTGGCAGTGGGCTAATGGGGGCAGGAATAGCGCAGGTTGCAGCTATAACAAATCATCAAGTGACTCTGGTAGATCAAACAAATGCAATCTTGACAAAATCTATGAGGTCTATCGAGAAAAGCTTGGGCAGAGTGGCAAAGAAGAAGTTTCAAGATGATGCAGAGGGTGCAAATAAGTTTGTCACAGATGCACTGTCAAGAATAACCGTGACAACAGAACCCCACTCTGCCGTTGGTGAGATAGATCTGTTGGTAGAGGCCATTGTGGAAAACATTCGCGTTAAACACAAACTTTTTTCAGATCTCGACAAGGCTGCACCCAGTCATGCAATTTTTGCATCCAACACTTCTTCATTGCCAATAGGAGAGATTGCCAGTGTAACAAACAGGAAGGACCGGTTTGGTGGACTCCACTTTTTTAATCCAGTACCTTTGATGAAATTGGTGGAGGTTATACGCATCTCGGAAACAACAGATGAAACATTTGATGCTTTGTTCCAGTTTAGCAAAGAACTTGGCAAAGTACCAGTAGCTTGTAGAGACACCCCTGGTTTTATTGTTAATCGTCTGCTTGTCCCATATTTATTGGAGGCCATTAGAATGCTAGAGAGaggAGATGCTTCAGCGAAGGATATTGATACAGCGATGAAGCTGGGAGCAGGCTATCCCATGGGGCCGCTAGAGCTGGCAGATTACGTGGGACTCGATACAACCAAGTTTATCATTGATGgttGGCATGAAAAGTACCCAGATGTCCAAGTCTTCAATCCCAGTGAGATCTTAAACGATCTTGTCGCGCGTGAGAAACTCGGGAAAAAGACAGGCGAGGGTTTCTACAAGTACGATTAGAGCGGGAACTCACAACATTCCGACCAATCAGCGATACCTTTAAAATAGTGCAAAACGTTACGCAATAGGTCACGTGAATGGATGTTCGGGATTGTTCAATCAGTACTTCCTGAGGCAGATCGTTCAATGAGAATTTAAAGATGTCCTTCTGAAGCCAGTTAAAAATATGCGTCTTGGTAGAGTTTTATCAAGAGCTTCTCAGTGATCAACTGAGAGTGAAATTTGTTGCAATAAAGTCGTTTAGAAACTTTGGagacattttgaatttgttttgttgtgatttaatttgatttgtgcacgaccccacaagctattcagCTTTAAACATGATCGTGTGAAAGTAAAGGTTATAATTGGTAtgattattattagtattttcaataattttgtttccgAATTAGATATTGGTTTCTAATAGATTTAACgataaaattgatgatgattataaaacttttactcgacgtttcgacgcgaaacgtcaagtaaaagttttataatcatcatcaattttatcgttaaattttatttccacaataaaaaggcctatttatatatatatatatatatatatttatatttacaaAGATTAAAATATTTCCAACAGGTAAGAACTAAAATATCTCCAACaggtaagaataataaaattTATATGTAAGTCTCTATTTTTAtgtataaaatacaataaaactactaaaaaaaataaataaataaataaataaagagaaaaaagaataGTTATGATAATAAAAAGTCGTTTAAACTCTAGATCTGGCAAGTTCAACGTCCACATGAATGTCTTTAACATTATTGGCCCTCCTCCTAATTGAGCTGGAGCCTCCGCGGCAGAGAAGCGCTGAACTTAAAATAGAGAAAGAGACTTT

Protein

Uniprot

Uniprot term	Description
Q9WVK7	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1
Q61425	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Hadh PE=1 SV=2
Q16836	Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=HADH PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02737	3HCDH_N	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain	Domain	Interproscan
PF00725	3HCDH	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR006180	Conserved_site	3-hydroxyacyl-CoA dehydrogenase, conserved site	Interproscan
IPR013328	Homologous_superfamily	6-phosphogluconate dehydrogenase, domain 2	Interproscan
IPR006176	Domain	3-hydroxyacyl-CoA dehydrogenase, NAD binding	Interproscan
IPR006108	Domain	3-hydroxyacyl-CoA dehydrogenase, C-terminal	Interproscan
IPR008927	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR022694	Family	3-hydroxyacyl-CoA dehydrogenase	Interproscan
IPR052242	Family	Mitochondrial 3-hydroxyacyl-CoA dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43561	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0070403	Molecular Function	NAD+ binding	Interproscan
GO:0003857	Molecular Function	3-hydroxyacyl-CoA dehydrogenase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006635	Biological Process	fatty acid beta-oxidation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00022	HADH; 3-hydroxyacyl-CoA dehydrogenase	EC:1.1.1.35	Caprolactam degradation	ko00930	deepkoala