Gene detail

Detailed information of ENSEWQP00005026662.1 in Acropora spathulata

Genomic Location: :...
NR annotation: XP_044182237.1, uncharacterized protein LOC114966062 isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSEWQT00005038549

ATGGCTTCCAATCCTCTCACTCTTTACTGTAATAAATGTAACAGTTCATTGGCAACTTCTGATATGATGATGCTGGCTAAAGTTCCCCCTACACAGGCACATGTTGCCATACGAAAAGACAAAGAAGACGCAGCATATGAAACGATTAGGAaaatccctaaccctaaccctaaccctaagaaAGGTGCCGTTTGTCCTTACAGAATTCTTTGCAAACAATGCAATGATCACGTGGGTACAATCAGCATCGTTGAAGATAATTCATTGATTTGTTTCAAGATCGAAAACGTTCATTTTCGACGGGGACACGAACAAATTAAAGGAAAGAGACTTAAACACATAAAGGAGGGGCTAATACAGAATGGACTTGAAGTTGTTAATGTCTCACAGCTTAATGAGTTTGCAGAAATAGTAAATAATAGAAGGAAATCTTCCCAACCACTAGTCTACTGCGACACTCACCTTTCGGAAGATGACATTCTGTCCCTGACTAAAGATAGCCCACGAGAATACCAAAAGGAGCTCTTCTTGCAAGCCCTGCGAAGAAATACGCTGGTATACCTCCCCACGGGCTCAGGTAAGACCTTGATAGCAGCCATGGTACTCAACTGTATGAAGAAACTGAATCCAGACAAACTCATGGTGTTTCTCGTGGACCGTATTCCGCTGGTTTATCAACAAAGTGACTACATCAAGTACCAAGTTCCAGACTTGAGAGTGGAGATACTGGCTGGGGACATCGGGCGTTTCCCAGGAGATAAAGCACGCTGGATGGCAACCGTCCAGGCGCTGttagaaaacaaaatcgacTTGCTTGTGATGACGAGTCAGATACTGTTAAACCTGATGGCTGAAGAGTGCAACGTATTGAGTATGTCTGATATATCTCTGATTGTATTCGACGAAGCGCATCACTGTCTGGGTAATCACAGCTATAATCAGATCATGAGGGATTTCTACAAGAAAACTGACGAGAAGTTGAAACCTCTTGTGTTGGCGCTGACTGCATCTCCCGCAGGCACAGATAAACTTGAAACCACAAGAGAGAAACTTGAAACTTTACTGTCAAATCTATGCGCATACGCACGAATGCCATTACGCTCAAGGGATTTGGAATTGCACTGTAATCGACCAGAAACGTCGTACAAAGTGAGTCCGTTGAACTCCAAGCAAACCCAACTGCAATCGGATATCGAGCGGTACCTCAAATCCATTACAAGCCTTATCGAAGAAGAAGCAAAACGTCCAAAAGCGTTGGAGGGTTTAAATGTATTATCACAATGTTACCGAGGAAAAACGCTCGTTGGTTCATTGGAGTCACTGAAGCTTCTAGAATCTTCGATCAGCGGGATAAGCCGAGTCTCAAACCTTTTTATTACAAGCGATAGGTATAAATGCTTAGTTGACGAACTCGAGAAGTTTATTGGTCAAGTTGAACAAGACAAAACTTCAAGAGGTATTATTTTTGTCAAGATGCGTAAAACGGCTTACAAGCTTTGTACCCGCCTAAGACAAGAAAGAGAAATTTGTCAACGACTCAACCCATCCTTCCTCGTTGGACACGGGCAAGGAAGTGATGGAATGGGTTGGAGAGGAGAGCAGGAAGAAATCCTCAAAAAATTCAGATCAGGTGATGTCAAGCTCCTCGTCAGCACGAGTGTGTTGGAGGAGGGCCTGGATGTACCAGCTTGCAACCAGATAATCCGCTTTGATAGCACGCTGACTTTGCGCGCGATTGTGCAGGGACGCGGGCGCGCCGCCAGGCGTTCCAACAGCCAGTTTGTTATCATTTGTAGCGATGCCAGAGAAGAAACGCTTGCACGTGAAGCGGTCAGAAAAGAAGCCAACATGGAAAAAGTCATGCAAGAAATGAACGTGAACCCCTGCGATCCATTACAAGCATTGTCTTTTGGTTGTCAGACTGAAAAGCCTGATTTTAGAAGCGATCAAGTTCAGGAGTCAACCGCAGAGAGTATGGAATCCCAACCGACAGCTGAAGAACATGATATGGGGAATGACTTTAGTGAAGAAACATTGACAGTCAACGAGAGAGGAGAAAGTTTGGCTTCTGGAGGGCcaaagaaaagaaggaaaaattatGTTCCACGTGTTGCCATAACTGTTGATAATGTCGTCTTTGGAGATGAAAGCAAACAACTGGGTCTTTTGACCAACTACTTCGAGGACTACTTCGATGTTAAGTCTATCAAAAAAGGAGAATCTGTGGAGATGAGGAAGACGACAGATGAGACCTCGGATAGAAAACGCACATCTAGATGTGTACGCCTTGAGCTGGAACCGTCTAAGCAGGGACAGTTCAACAACAAAGATAAATTCTTTGGCTATGTTGCACAGTCTTGGTGTTCTCGTCCAACGGAACTATTGACGGAAACAAAGCAACTTTGGCTCCGTCGTGACGACATATCACAGAAACACAAGGATTACAAGCCAGTTATGGTAATTAAGCCAGACATGATGAGCCTGGGGTACTTTCGGAGTGAATCCCAATACTGCCAACACTGGCCAGTTAAGAATTTCAAACTTGAAAACATTCGAATTGCATTTCAGCATGATCTGAAGACAGTGCTGATCTACTTCACATTGCCAAACCCAAGAAGCCAGTTCAAGGCGGACCTGTATAAACTTCACTTTCACTACAACGAGCTTCAGGAATACATCTTGGTGAACAGACCACGATCGTCTGCCACACATTTGTATCTGTTATTAAGACATCCACCGCGCATGTTCAAAGCCAAAAGCTTTGTCAAGAAAGACCAAGATGTCGATGATGACGAGAACGACTTTGAAGACTGGTACTACGGAGAGAACGATTACGATTCCGGCCTTGATCACGAAAATATTGACGAGTCTACGAGCGAGTCCGAAGACAGTGAGGCGTTAGACGACGGCGGTTATTCAACTGCAGATCATTCAAAGAAACGGGAGACTCCGGACAACGAATCTCTCCTCACAAGTACAAATTTCGTAAGCATTGATGACGTGATAAATTGGGAGAGGGTTATTGAAATAGAAGACAGTAGGGACTCATTTGGTTCATGCTTCACTTACAATTTCACTTTCAAGCCTGATGAATGGAATGATATGAAAGATGTGCTTGCCACCATTGGCAAATACGACAAGAAAGTGTTTTATGCATCTGTAACAAATTCCATCACAAGCTTACCAGAGATTTCCATCCCTAACGAGCTGCCTTTCGACGTCAAATATGCCATACAGTGTGTCCTACACTCTTACCCCTTCATCAGAGGAAGAATCACCGGGAAGTTCAATCATTTGCTAAGTAGCaaacctgagaaggtggtgcgGTTGGCATTAGCGAGACTCGGCTCGGCTATCGAACGAAACAGTTTCTGTGACCCAGAACAATACTTTGAAAGCCTGTTAGAAGAAACAAATGTCGCTGGTACAAGCGGAATCTCGAAACAGCTTCTCCCCAGTGAGTGTGCGATGATAAAGCGCATGGTTGTCACGCCCACACGCCTGTTATTTTTCCCACCAGAAGTGATGTCAAAGAATCGTGTTCTCAGGAACTTCGACACCGATCAATTCCTGTTTGCCAATGTCCGTGATGAGGACTTCTCGAGGCTTTCATCGGCCGCTGGAATTATTGATAAGATTTTGCAACGCCTTCAAACCACTTTGGACAATGGTGTTATGGCAGGCGGACAACGTTTTCTTTATCTTGGTTCTTCCAATAGCCAGCTTCGTAACCACGGCTGCTGGTTCGTTCGACCACGTCCATATCCAGAGGAGATTCGAGAATGGATGGGAGACTTCAGTACGATAAGGTAA

Transcript

ENSEWQT00005038549

Protein

Uniprot

Uniprot term	Description
Q7S8J7	Dicer-like protein 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dcl-1 PE=2 SV=1
A4RKC3	Dicer-like protein 1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DCL1 PE=3 SV=2
Q0CEI2	Dicer-like protein 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dcl2 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04851	ResIII	Type III restriction enzyme, res subunit	Family	Interproscan
PF05183	RdRP	RNA dependent RNA polymerase	Family	Interproscan
PF11648	RIG-I_C-RD	C-terminal domain of RIG-I	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR006935	Domain	Helicase/UvrB, N-terminal	Interproscan
IPR007855	Family	RNA-dependent RNA polymerase, eukaryotic-type	Interproscan
IPR021673	Domain	RIG-I-like receptor, C-terminal regulatory domain	Interproscan
IPR051363	Family	RIG-I-like Receptor (RLR) Helicase	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR038557	Homologous_superfamily	RIG-I-like receptor, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14074	HELICASE WITH DEATH DOMAIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0003968	Molecular Function	RNA-dependent RNA polymerase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan