Gene detail

Detailed information of ENSEWQP00005029751.1 in Acropora spathulata

Genomic Location: :...
NR annotation: XP_044169170.1, DNA-directed RNA polymerase I subunit RPA1-like [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
O95602	DNA-directed RNA polymerase I subunit RPA1 OS=Homo sapiens OX=9606 GN=POLR1A PE=1 SV=2
O54889	DNA-directed RNA polymerase I subunit RPA1 OS=Rattus norvegicus OX=10116 GN=Polr1a PE=1 SV=1
O35134	DNA-directed RNA polymerase I subunit RPA1 OS=Mus musculus OX=10090 GN=Polr1a PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04998	RNA_pol_Rpb1_5	RNA polymerase Rpb1, domain 5	Domain	Interproscan
PF05000	RNA_pol_Rpb1_4	RNA polymerase Rpb1, domain 4	Domain	Interproscan
PF04983	RNA_pol_Rpb1_3	RNA polymerase Rpb1, domain 3	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007081	Domain	RNA polymerase Rpb1, domain 5	Interproscan
IPR007083	Domain	RNA polymerase Rpb1, domain 4	Interproscan
IPR038120	Homologous_superfamily	RNA polymerase Rpb1, funnel domain superfamily	Interproscan
IPR047107	Domain	DNA-directed RNA pol I, largest subunit, C-terminal domain	Interproscan
IPR042102	Homologous_superfamily	RNA polymerase Rpb1, domain 3 superfamily	Interproscan
IPR007066	Domain	RNA polymerase Rpb1, domain 3	Interproscan
IPR045867	Family	DNA-directed RNA polymerase, subunit beta-prime	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19376	DNA-DIRECTED RNA POLYMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003899	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0006351	Biological Process	DNA-templated transcription	Interproscan
GO:0001054	Molecular Function	RNA polymerase I activity	Interproscan
GO:0005736	Cellular Component	RNA polymerase I complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02999	RPA1, POLR1A; DNA-directed RNA polymerase I subunit RPA1	EC:2.7.7.6	Transcription machinery	ko03021	deepkoala