Detailed information of ENSEWQP00005039840.1 in Acropora spathulata

Genomic Location: :...
NR annotation: XP_015762024.1, PREDICTED: protein CLP1 homolog [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A7RG82Protein CLP1 homolog OS=Nematostella vectensis OX=45351 GN=v1g236308 PE=3 SV=1
Q5ZJL4Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Gallus gallus OX=9031 GN=CLP1 PE=2 SV=2
A2VE01Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Bos taurus OX=9913 GN=CLP1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16573CLP1_NN-terminal beta-sandwich domain of polyadenylation factorFamilyInterproscan
PF16575CLP1_PmRNA cleavage and polyadenylation factor CLP1 P-loopDomainInterproscan
PF06807Clp1Pre-mRNA cleavage complex II protein Clp1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032324DomainClp1, N-terminal beta-sandwich domainInterproscan
IPR032319DomainPolyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domainInterproscan
IPR038238Homologous_superfamilyClp1, C-terminal domain superfamilyInterproscan
IPR038239Homologous_superfamilyClp1, N-terminal beta-sandwich domain superfamilyInterproscan
IPR010655DomainPre-mRNA cleavage complex subunit Clp1, C-terminalInterproscan
IPR028606FamilyPolyribonucleotide 5-hydroxyl-kinase Clp1Interproscan
IPR045116FamilyPolyribonucleotide 5-hydroxyl-kinase Clp1/Grc3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12755CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan
GO:0005849Cellular ComponentmRNA cleavage factor complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0051731Molecular Functionpolynucleotide 5'-hydroxyl-kinase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14399CLP1, HERB; polyribonucleotide 5'-hydroxyl-kinaseEC:2.7.1.78
Messenger RNA biogenesisko03019deepkoala

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