Gene detail

Detailed information of ENSEWQP00005046646.1 in Acropora spathulata

Genomic Location: not available for this species
NR annotation: XP_029186456.2, LOW QUALITY PROTEIN: BRCA2-interacting transcriptional repressor EMSY-like [Acropora millepora]
Species abbreviation ASPAT · all data for this species · gene families

Sequence

CDS

ENSEWQT00005067703

ATGTCTGCAGAAATGATGGACATAACCAGAGATGAATCAAAAAGAATTCTTCGCAGACTAGAACTAGAAGCCTATTCCTCTATTATCAGTGCCTTCAGAGCTCAAGGAGAATTAAGCCGgacaaaaaagaaaattttgcaAGATTTAGGAACTCAGCTGAGCATATCCACTGAACGGCACAGAGCTGAAGTGAGAAGAGCTTACAGTGATGACAGGCTTGCCATTGTAGCTGAGAGTATTTATGGTGCTGGAAGCTGTGCTGAATGGGCAGCAGAAGGGCGGAGACTTGTACCACTTATGCCACGTCTTGTTCCTCAAACAGTTTTTAGTGCATCAGCTACTGCTGCAGCCAATGCTGCTGCTGCGGCAAATGCTAAAGTCCCTGTTTCTTCAGgCGTAAAACCTAGTGGCAGTCCAAACTCTGTAAACACCAATGGAAACTCTTCAACTTCTCCCAAAACACAAAGCAATTTGAAATCTGTTACAGTTAAACAGCAACCACAAGCAGGCTCACCACAGTGCAGTGATACAGATGGATACGATGATGATGGTAAACCAAAACGCAAAAGGAGACTAAGTGTAACAAGCCTCAACAAACCAGTGACAAAAGTTACTATTCCCACCCCAACACTGGTATCAAAGTCTCTGACAAAGCAAACTACATCAGTTAGTACTATGACCAAGTCTGGCAAAACTTTACCTGGACCTGCTGGGACAATCAAGGCTATTCCACGAATCTCTCAACTCCCTGCTTCAGCTTCACAAGTGAAACTCCTCACAAAGACCATTGCAGTGTCTCAGGCAATTTGTCAGGCCAAGACAGTTCTCAGTTATAAAGCAATGTCTTCAGTCACATCTTCCACAGCCAAAGCTCAAACAGTGGTGACACAGTCCACGCACAAGACTCAAACCAAACTTGCATCAGGGACTCCCCCAAAGGCAGTAGTGTCATCAAAGACCCCTATATCATCTGGTATTAAAAATCTGACCGGTGGAACTGTCAACCCAGCCATCACAGCAAATCCTATTGGAGTAGCACTGAAAACCGGTTTAACACAAGCTCAGCTGGCTGCAAGACACAAAGCTAAACAACCAGCAGCCAGATTTAAACCTCTTCCGGGAACTGTTAAGTTCAAGTCTGTCACACCAGCTACTATGGGAACCTGTTCTACTGTTACTATGGTAACGCCAAGTCCTAGCTCTCAGGCCACGTCAGCTTTGCCAGCCACTAGCACTCAGCCAGTTGTCCGCGTTATCCATGTTCCTGGAACGGGAGGTGTTGGGGTCAGCAAACCTGTGGTTGTCATGACAACAGGTCTCACAAAAGCAGCAGTTGCAAGTGCTCTACCAGGAGTAAGCAGCTCAGCCAGTTTAACAAAGTCAACATCCCAGGTCTCTCAAAATACCTCAGTTACAAAGTCAGCTGTAACTTCTGTTGCTACACAGCCATCATCATCCAAAGCCAAAGTTTTTAGTGCTTTATCCTCAATAGCCTCAACAGCCTCCAAAACAGTTGGCATGACAACACTTGTTGGAGGAACAAAACGGGTAGTTCTGTCAGTCCCAGCTTCCTTACAACCTACGACAAGTACTTCCATTCCAGCTACGTCTTCCCAGGGGATTGTGATTACTAAAACACAAGGTGTCAAACTGACTTCTTCGGCTGTGGCACAGTCGCCATCTGCTCTCAAGAAAGACACCAAAATAACAGCTTCTCTTACCATGGTCAGCCCAAAGCTGTCTCCTCAGATCACACCTGGTCTTTCAGCTCCAACAGTCACCACACAGGTACGATCCAGACCATTGCCAGCTATACTCCCTGCTCCTCCCAAACCATCAAGTCTACAGCAAGCAGCTTCTGGTCTCCCTGCAACAGCAGGCACAAGAAAACTTCCAACTATCCTTCCAGCTCCGGCAAAAAGTGTGAATGTCTATCCCACTGTTATTGTTCCAGTTATGACAGGGGTGGGTGCAAAGCTTCCGTCATCAGTGTCTGTTTCTGCAACTAAACCAGGCAGTGGTACTGCAGGGATATCACCTTTGAATGAGGTAGTTGGCCAAACGTATTTGAAAGTAGCTCCAGCTGGTCAAGATACAATCTCAGCTGCAACAGATCAAGCATTCCTTAAGGTTCAGGAGAATAGTGAGAAATCTGAGCCAACTGAAACATCAGGTTTGGAAGTACCAGTCACCCGTGATCAAAACCCAGTAACTGAATGTGATAATAACACCTCCTCAGAGGATGATTCGCTTCTTATGTGCTCGGAAACAATTGATAGCAACTGTGGCATCACTGAGGTGCCAACAGCGATAGATTTCTTTCCAACCGTTGCTGAAAGCACACCAGTGAAAGGTCAGAGTGATGAAATAGCTCTTTCAGCTCTCCCATCTTCGAAGGAACCGGAAATTAATGCAGGCCCTCTGTCACTTCAAGATACAGGAGTTTCTTTAGCTGAATTAATTACCGAAGATGCAGATCAAGAAGACCTTGACTCCAAAACAAACCCTTGTGATAACCAGCTTGCAAAAGGCACTGAATCTGTTGAAAATGTAATGGTTCAGAGATTGGATGCTACCAGTGAGATTACAGAAATTGTGGCAGGTAGTGTCCCTGAAAACCTTTATCCAGAATCTTTACATGATGAGGAACCTCTTGAACCTGTGCTTGATGTTGATCTTTCTTCATCTTTACAAAGTCATCGCTTTGATGATCAAAATGTGAAAGTAAACTGTGGTGAGGAACTTTTGGCAAACACTGGGCTTCCTGTGGACAATGCACTGCATATCATTGAAAGTTTTGTTGAAAGTATGGAGGCAAACTCAGGTGAAAAGTGTGAGCCAAATCTACCAGGTGAAGATTCACAAATTGGACACTTGCAATCTTCCTGCACAGAGAATTTACCTTTGCCCGATGTGGGCACTGTAggcaatgaaaatgaaaaaagtgAACAAATTATAACTGGCACAGAGACTGATAAGGACCACAATGAAAGTCAGCCATCCACCAGTTTTCCAAGATTTGACGAGGAGAGCTGGGATGGCCCCATTGATGTTTTGTCAACTTCTACAAGTAGTTCCAATAGTGCAAGTGAGAGCACAGATTTGACAGAAAAGGAAATCAGGGCTCTTGAAGCATTTGGTAACATAAGAACCAgtggaaggaaaagaaagcctCCTTCATCACTTGATACATCCCCTCAGCGGCAAGTCAGTGGCTGGGTCAGAGGTGCTCTAAGCCTGCTGCAAAAGGTAGCCAGTTATCGCGGGCAAGGAAGGCGAAAGGGTGACTTTGGTGCTGCTAGCTGGTTCCTCAATCCAGTTGACCCTGTTGATGCACCAGGTTACTATAAGGTTATTAAGACTCCAATGGATTTTGGAACAGTCAGAGCTAAGCTGGAGAGTGGAAAATACCAAGAATATACTGAGTTTCATGATGATATGATGTTGGTGAAGTCAAATTGTTTAAGATACAATCCACCAGAACATGAAATTCATCAGGACTGCGAAGAAGTTTTTAGATTCTATGAAACAGAGTATGCAAAGATGTTAGAAAGATGGGAaaagTGTCATGTCTCTCCAGCAAAGAAGCCACGAGTTGCATAA

Transcript

ENSEWQT00005067703

TGATCGTACACGGTATCCCCACGTTTCGCGACATTTGATAATTATATCTTCCTTACCTTAGGGCAAGGGCTAAGTTcagaaaaaaatgtgaaaaatctACGAATTCACTGTTTCTTCGTTTGGAAGACCGACCTTGACAGCTCCGTGAAAACCAAACTCTGAGCCCACGATAGTAAACAACAACAGGAGCATGCGTGTCACGGTGATGGAAATCAATATGGCGGACGGCTCGCAACTGGCGATCGTCAAAGAAAGTTACGCCTTTTTGAAGGAAATCTAAAGAGAGCTCTACAACTAACATGTCTGCAGAAATGATGGACATAACCAGAGATGAATCAAAAAGAATTCTTCGCAGACTAGAACTAGAAGCCTATTCCTCTATTATCAGTGCCTTCAGAGCTCAAGGAGAATTAAGCCGgacaaaaaagaaaattttgcaAGATTTAGGAACTCAGCTGAGCATATCCACTGAACGGCACAGAGCTGAAGTGAGAAGAGCTTACAGTGATGACAGGCTTGCCATTGTAGCTGAGAGTATTTATGGTGCTGGAAGCTGTGCTGAATGGGCAGCAGAAGGGCGGAGACTTGTACCACTTATGCCACGTCTTGTTCCTCAAACAGTTTTTAGTGCATCAGCTACTGCTGCAGCCAATGCTGCTGCTGCGGCAAATGCTAAAGTCCCTGTTTCTTCAGgCGTAAAACCTAGTGGCAGTCCAAACTCTGTAAACACCAATGGAAACTCTTCAACTTCTCCCAAAACACAAAGCAATTTGAAATCTGTTACAGTTAAACAGCAACCACAAGCAGGCTCACCACAGTGCAGTGATACAGATGGATACGATGATGATGGTAAACCAAAACGCAAAAGGAGACTAAGTGTAACAAGCCTCAACAAACCAGTGACAAAAGTTACTATTCCCACCCCAACACTGGTATCAAAGTCTCTGACAAAGCAAACTACATCAGTTAGTACTATGACCAAGTCTGGCAAAACTTTACCTGGACCTGCTGGGACAATCAAGGCTATTCCACGAATCTCTCAACTCCCTGCTTCAGCTTCACAAGTGAAACTCCTCACAAAGACCATTGCAGTGTCTCAGGCAATTTGTCAGGCCAAGACAGTTCTCAGTTATAAAGCAATGTCTTCAGTCACATCTTCCACAGCCAAAGCTCAAACAGTGGTGACACAGTCCACGCACAAGACTCAAACCAAACTTGCATCAGGGACTCCCCCAAAGGCAGTAGTGTCATCAAAGACCCCTATATCATCTGGTATTAAAAATCTGACCGGTGGAACTGTCAACCCAGCCATCACAGCAAATCCTATTGGAGTAGCACTGAAAACCGGTTTAACACAAGCTCAGCTGGCTGCAAGACACAAAGCTAAACAACCAGCAGCCAGATTTAAACCTCTTCCGGGAACTGTTAAGTTCAAGTCTGTCACACCAGCTACTATGGGAACCTGTTCTACTGTTACTATGGTAACGCCAAGTCCTAGCTCTCAGGCCACGTCAGCTTTGCCAGCCACTAGCACTCAGCCAGTTGTCCGCGTTATCCATGTTCCTGGAACGGGAGGTGTTGGGGTCAGCAAACCTGTGGTTGTCATGACAACAGGTCTCACAAAAGCAGCAGTTGCAAGTGCTCTACCAGGAGTAAGCAGCTCAGCCAGTTTAACAAAGTCAACATCCCAGGTCTCTCAAAATACCTCAGTTACAAAGTCAGCTGTAACTTCTGTTGCTACACAGCCATCATCATCCAAAGCCAAAGTTTTTAGTGCTTTATCCTCAATAGCCTCAACAGCCTCCAAAACAGTTGGCATGACAACACTTGTTGGAGGAACAAAACGGGTAGTTCTGTCAGTCCCAGCTTCCTTACAACCTACGACAAGTACTTCCATTCCAGCTACGTCTTCCCAGGGGATTGTGATTACTAAAACACAAGGTGTCAAACTGACTTCTTCGGCTGTGGCACAGTCGCCATCTGCTCTCAAGAAAGACACCAAAATAACAGCTTCTCTTACCATGGTCAGCCCAAAGCTGTCTCCTCAGATCACACCTGGTCTTTCAGCTCCAACAGTCACCACACAGGTACGATCCAGACCATTGCCAGCTATACTCCCTGCTCCTCCCAAACCATCAAGTCTACAGCAAGCAGCTTCTGGTCTCCCTGCAACAGCAGGCACAAGAAAACTTCCAACTATCCTTCCAGCTCCGGCAAAAAGTGTGAATGTCTATCCCACTGTTATTGTTCCAGTTATGACAGGGGTGGGTGCAAAGCTTCCGTCATCAGTGTCTGTTTCTGCAACTAAACCAGGCAGTGGTACTGCAGGGATATCACCTTTGAATGAGGTAGTTGGCCAAACGTATTTGAAAGTAGCTCCAGCTGGTCAAGATACAATCTCAGCTGCAACAGATCAAGCATTCCTTAAGGTTCAGGAGAATAGTGAGAAATCTGAGCCAACTGAAACATCAGGTTTGGAAGTACCAGTCACCCGTGATCAAAACCCAGTAACTGAATGTGATAATAACACCTCCTCAGAGGATGATTCGCTTCTTATGTGCTCGGAAACAATTGATAGCAACTGTGGCATCACTGAGGTGCCAACAGCGATAGATTTCTTTCCAACCGTTGCTGAAAGCACACCAGTGAAAGGTCAGAGTGATGAAATAGCTCTTTCAGCTCTCCCATCTTCGAAGGAACCGGAAATTAATGCAGGCCCTCTGTCACTTCAAGATACAGGAGTTTCTTTAGCTGAATTAATTACCGAAGATGCAGATCAAGAAGACCTTGACTCCAAAACAAACCCTTGTGATAACCAGCTTGCAAAAGGCACTGAATCTGTTGAAAATGTAATGGTTCAGAGATTGGATGCTACCAGTGAGATTACAGAAATTGTGGCAGGTAGTGTCCCTGAAAACCTTTATCCAGAATCTTTACATGATGAGGAACCTCTTGAACCTGTGCTTGATGTTGATCTTTCTTCATCTTTACAAAGTCATCGCTTTGATGATCAAAATGTGAAAGTAAACTGTGGTGAGGAACTTTTGGCAAACACTGGGCTTCCTGTGGACAATGCACTGCATATCATTGAAAGTTTTGTTGAAAGTATGGAGGCAAACTCAGGTGAAAAGTGTGAGCCAAATCTACCAGGTGAAGATTCACAAATTGGACACTTGCAATCTTCCTGCACAGAGAATTTACCTTTGCCCGATGTGGGCACTGTAggcaatgaaaatgaaaaaagtgAACAAATTATAACTGGCACAGAGACTGATAAGGACCACAATGAAAGTCAGCCATCCACCAGTTTTCCAAGATTTGACGAGGAGAGCTGGGATGGCCCCATTGATGTTTTGTCAACTTCTACAAGTAGTTCCAATAGTGCAAGTGAGAGCACAGATTTGACAGAAAAGGAAATCAGGGCTCTTGAAGCATTTGGTAACATAAGAACCAgtggaaggaaaagaaagcctCCTTCATCACTTGATACATCCCCTCAGCGGCAAGTCAGTGGCTGGGTCAGAGGTGCTCTAAGCCTGCTGCAAAAGGTAGCCAGTTATCGCGGGCAAGGAAGGCGAAAGGGTGACTTTGGTGCTGCTAGCTGGTTCCTCAATCCAGTTGACCCTGTTGATGCACCAGGTTACTATAAGGTTATTAAGACTCCAATGGATTTTGGAACAGTCAGAGCTAAGCTGGAGAGTGGAAAATACCAAGAATATACTGAGTTTCATGATGATATGATGTTGGTGAAGTCAAATTGTTTAAGATACAATCCACCAGAACATGAAATTCATCAGGACTGCGAAGAAGTTTTTAGATTCTATGAAACAGAGTATGCAAAGATGTTAGAAAGATGGGAaaagTGTCATGTCTCTCCAGCAAAGAAGCCACGAGTTGCATAAAAGATTGATCCCTCTTGAGCATGAAAATGTGTCAAGTTTGATATAACTTTTAAAGAGTTTATCATGTCAATGATATTTTAAAAAATGCATTAAATACCATTACCATTCTTCAAAAAATCTTCATGGTAAAAATACTGTTCAAGAGTGCAAGAGGATAAAATACCTCTAGTCTAACTCTGATCCAATATGCCTCCACTCtggtttttttttcagatgtcagctaatttacattacattcttTCCCTTCCAAGTAATGACCTGTGGTCTCCCAAAACTCCAGCATGTATCAGCCAATAGGGATTGGTGACAGACATGTTATCAAGGAAATGAGTTGGGTGTTTGTTCTTCCTCCTTTCACCTTGCAAAAGGAATGACTGAAAACAGGTTATGCAGTCCATCACAGACAAACTTTAGCCGTGAGACTTTTTTTGTTtagctgtttttgttgttggttttcTCATAGAAGTTCTTCTTTAAATTTGACCACATCTCAAATTCCATCCCATAAAATATGTGAATACATGCATCACCAACAAGGGTGTGGGGTTGTTTcagaaacaagaaaatgagGATATAAATAAAAGTAACAACCAGCATCACAATATGATGCAAATGAGATATCCAGTGGAAGATTTCACACTCTTTATTTCCTGTTAAGTACAGGCCTTTCTTTAACACACTCCAGAAGTGACAAATTGGAATAAACCAGTGCATTTTCTGattaaaaaagaagaagaaaaactgAGACATAACATGCTTTCACAATAATCAAAAAGAAAGGTCTATTGACTGTTGATGTTACTGTTTAAAGGACTTTATTGAAATGAGAACAACTTCAAGATTTTGAACTGAAATAATTTAAGCCATTTTAACTTTGCGTGGACATCAAAAGATGTTTAAAAGTTCCTTGGCCTTGAGAATAATATAAATGTATAAATTATCACACTCAGATAAAAATCTTATTCACAAATTAATTTCCCTCTTCAATCCATAAATTCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7Z589	BRCA2-interacting transcriptional repressor EMSY OS=Homo sapiens OX=9606 GN=EMSY PE=1 SV=2
Q7ZUV7	BRCA2-interacting transcriptional repressor EMSY OS=Danio rerio OX=7955 GN=emsy PE=2 SV=1
Q8BMB0	BRCA2-interacting transcriptional repressor EMSY OS=Mus musculus OX=10090 GN=Emsy PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005788 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03735 all species →	ENT	ENT domain	Family	Interproscan
PF00439 all species →	Bromodomain	Bromodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005491 all species →	Domain	ENT domain	Interproscan
IPR036142 all species →	Homologous_superfamily	ENT domain-like superfamily	Interproscan
IPR001487 all species →	Domain	Bromodomain	Interproscan
IPR036427 all species →	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR033482 all species →	Family	BRCA2-interacting transcriptional repressor EMSY	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16500 all species →	BRCA2-INTERACTING TRANSCRIPTIONAL REPRESSOR EMSY	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25790	EMSY; BRCA2-interacting transcriptional repressor EMSY	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.