Gene detail

Detailed information of ENSHHBP00000004726.1 in Porites divaricata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites divaricata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02919 all species →	Topoisom_I_N	Eukaryotic DNA topoisomerase I, DNA binding fragment	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013034 all species →	Homologous_superfamily	DNA topoisomerase I, DNA binding, N-terminal domain 1	Interproscan
IPR013499 all species →	Domain	DNA topoisomerase I, eukaryotic-type	Interproscan
IPR013030 all species →	Homologous_superfamily	DNA topoisomerase I, DNA binding, N-terminal domain 2	Interproscan
IPR051062 all species →	Family	DNA topoisomerase IB	Interproscan
IPR048045 all species →	Domain	DNA topoisomerase I, DNA-binding domain	Interproscan
IPR008336 all species →	Domain	DNA topoisomerase I, DNA binding, eukaryotic-type	Interproscan
IPR036202 all species →	Homologous_superfamily	DNA topoisomerase I, DNA binding, eukaryotic-type, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10290 all species →	DNA TOPOISOMERASE I	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003917 all species →	Molecular Function	DNA topoisomerase type I (single strand cut, ATP-independent) activity	Interproscan
GO:0006265 all species →	Biological Process	DNA topological change	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005694 all species →	Cellular Component	chromosome	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan
GO:0007059 all species →	Biological Process	chromosome segregation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSHHBP00000004726.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.