Detailed information of ENSHHBP00000020111.1 in Porites divaricata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation PDIVA · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity|UBR-box · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13764
all species →
E3_UbLigase_R4E3 ubiquitin-protein ligase UBR4FamilyInterproscan
PF19423
all species →
E3_UBR4_NE3 ubiquitin-protein ligase UBR4 N-terminalDomainInterproscan
PF02207
all species →
zf-UBRPutative zinc finger in N-recognin (UBR box)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025704
all species →
DomainE3 ubiquitin ligase UBR4, C-terminalInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR003126
all species →
DomainZinc finger, UBR-typeInterproscan
IPR045841
all species →
DomainE3 ubiquitin-protein ligase UBR4, N-terminalInterproscan
IPR003903
all species →
Conserved_siteUbiquitin interacting motifInterproscan
IPR047509
all species →
DomainE3 ubiquitin-protein ligase UBR4-like, UBR-boxInterproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan
IPR045189
all species →
FamilyE3 ubiquitin ligase UBR4-likeInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21725
all species →
E3 UBIQUITIN-PROTEIN LIGASE UBR4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10691UBR4, ZUBR1; E3 ubiquitin-protein ligase UBR4EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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