Gene detail

Detailed information of ENSHHBP00000020562.1 in Porites divaricata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites divaricata · all data for this species · gene families

Sequence

CDS

ENSHHBT00000023982

ATGAGTATTGGAAAGCCGTTCTTCTTGGTTAAACTTTCCTGTGTTGACACAAATCTTACAACTTCAGTTGTAGTCCAGGGGGACCAATTTATGTTCTGGCACAATTTCCTGCAAGTTGGAGAGGCATATGTGTTCAGAAACCTAAGAGAAACCACTATGAACAAGACAGAACCCAAACGCTTGAAAATTGACAAGCAAGGAGAGGATTTGAGTCCGATAAAAAGTAAGCAAAAGTTAGCTGCTACATCAAGAAGTGTTACTGCTCAGGAACCATTATGCAGAGATGTTGCAGCAGCAAAACCAAAGCCCCCAGTTAACATGTCTTACACGGGTGTGATAACGAAATGTCTCAAACCTGAAGGTGGAATTTATGAACTGGACGAAAAAATAAGACTGTACATTAATCACCAGCCCTGTGTAAATCTGGGCCGTGGCTTGCGTGTTGGTGCTCATGTTACCGTTCACAATGTTCATTTGTGTAGGAAAGGAAAGaAAGTTCTTGGATTGTGTTGCTGCACACAaagtacagtgaaaattatCAAGTTTTCATCCCTTGCATCACCTTGGAAGCCTTTCAGTCCTTGTGAAAGTCCGTTGGCGCTGTTAGGGCAGAACCTCACTCTTGCTGATTACGTAGACTTGCTGGAGATGTGTGATAAAGTTATTGAGAAGTTTTCGCCCTCTTACAGGACAAGTCAGTTGGTTGCTTACTCTGCCAGACAGAACCGGAAGGGAATCAGAGACGCGCGGCACAAGGAAAGTGTTTTGGAACAACTACTGTCCTTCATAAGAAATGACTCAGTTTCGAACAGAGCTCTACCAAGAAACATCTATGATGAATTTTTTGAGATACCTCACGAATGCCACCCAAATAGAATTAGTGAACTGCAATTTCCTTGGCTTCCAACTGTGAAGGAGTTTCTTGATGCAGTGAATCAAAAATGGGCGGAGGAACCCTGGCTGAACGGGCAATCAAAACGCATAACTGCTACACAGGAAAAAGAGGAATGGATGTACAAGATTCTGACTCAAGAATGTTTCAACCATCCAGTGCTTCTTGCAGGTTTGTTACGAAGCTCTTCAAAAACTGGTGGATTACGACTCGCTGATCAAACTGGAGAAGTCAGCTGTATCGTTACCCCCGTTGACCAACAATCCGTGGACCACGACTGTGTCGGAAATTGCTGCAAGACAAACTGCCCTTATGCACAGACATGGCATTCTAACGCCATGATTCAAATCAGCAAGTTTGAATTGATCACAGAGAAATTTAGGTCAAGTGATCTTAGTCAAGCGAGTTTATCTGAAGGTGGAAGCCGCACATATCTCCAATTCTCATTTGACAATGCAAAAGTTTTGATTTCTAAAGACACATGTAACCAGCGTGAGAAGGGAGGTTCTGGGAGGAAGAAGGAAACAGATGAAAGCGTGGATCGAGGATTTAAGAATGTTACAGACGCGAAGGGTCTTGAATTTATGTGCAAGATATTATTTATGGTAAGAAATTGTGAGCTTCCCACACTCCGAAAACTTAAAGAGGAAGTCTGTTACCCTTGTGGTGTAGaaattaaaattgttgctgTTCAAAAAAGTGACGTTGAAAATGTGACCACGGGAAGTAAGAGCACTAACTCAGAACGGGGTGACTCCTGTCCAAGTAGCTGTTTCTCTCTCTCAGAATTTCAGCTCCAAAGAAAAAACTCCGCCCTAAAACTTTTGAAGAAAAGCTTGTTTTGGTCCCGGTTTCTTCATCCGGGTTGTTTTTACGTCATCACGGAAAAGGTCCCGGACGAGGCAAGTTCCTGGATCTTTAGAAATGGTAATTTGGAGCTATTAATTAGCGTCAGTTCCAATATGGAATTAGAAAGAATTTGTTGGTGTGAAAGCTGTAGGCTAGCTGCCTTATCAACGGACTCAAGAAACAGTAAGGAGATTGGGAAAGTGCTGGATGACCTGAAAGAGGATTTTTTAAGAAATGATCAATTATGTACTGTAGACTCCATTCTTAGTGATACTGTGGGACAACAAGAAGAAAGTGAGAATTCTTTGCAACCAAGTCGTTCTTCCAACATGCAAATCAGCTTTCGAGGCGTCATCGTCAGCCGCGAGCTGCGCCAGTCTGACTCTCCCGGCAGCCAGCGGTTGCCAAAGGGACTGATAGAAGTACCAAAGTTTGGTCCTATTAAGGTTACAGCGGTTAAAGATCTACAGCTGGGGTTCACTCTGCTTAGCAATGCTATTATACTACTGAGAGTACAAGACCTTCGATCTCCAAACGCAATCGCTGTGTATTTAGACTTGAGGAGGACAAGCTATATCTATGGCATGCTGCCTGGTACCTTTGTCCAATTTCGAAGATTCGTAAGAAAATTTTCCCGCACGAGAAACATGTACTGCACTTTTGAAGCCTGTTCATCTATTGTTGTAGAAAGACGAACATTTTCAAAAATCACCGACCCTCGGCTCTCAGATGTCACAGCATCAACATCGGCCGAAGAAAATACAAAAGTTCTTCCCAATCGATATCTCATCGATCTTATTCGGAACGAGACCCAAGGGAACTTCATTCAGACTGTCTCACGCGTACGTTGTCGAGTAACCGCTGTCCAGAAAGCGAGTCTGCGCTGGTTGTGTAAACGATGCGGGGAGTTAGTATTTAGAAACGAATGTACCAGCGGCTGCTACAGTTCAGCGGGATATAAATTTAACGCTGAAGCAAGGTGTGTTGTGGAAGATGGGACGGGAGAGGCGCAGCTGTATGTCTATGATGAAATCGTCCAGACTTTACTGAAGCTGTCTTCTCAACAGTGGCGCCACCTTCAAGATATGGCCATGCGCACTGGGGAGCTTTTGTACCAGCGTCTCTGGCGAGGTGGAACCAGTCATCCTCAGCTCAATCAAGGAAACCAATCTTCCAGAGAAGCTGAGGCCAAGATGAACTTGGAGAACTATTGTTGTTCTTCAAAACTACAGCACCTGGTAGTCTTGCATTGTAAACTCTTCCGCTTCAGCAAGAGTGCAGCTGGTAACACTGATCAAGGGTATGAGAGTCGCAGCATTCACCTTGGCCTGACAGAACACAGCACCTTGGTGCTTCCCAAACTTCTGCTTAGGGCTGTGTCAATCACAGACGTGAGACCAGCGGACGAAATTCGTCAGTTACTTCAAGATGCCAAAGCTTAA

Transcript

ENSHHBT00000023982

CATGAGTATTGGAAAGCCGTTCTTCTTGGTTAAACTTTCCTGTGTTGACACAAATCTTACAACTTCAGTTGTAGTCCAGGGGGACCAATTTATGTTCTGGCACAATTTCCTGCAAGTTGGAGAGGCATATGTGTTCAGAAACCTAAGAGAAACCACTATGAACAAGACAGAACCCAAACGCTTGAAAATTGACAAGCAAGGAGAGGATTTGAGTCCGATAAAAAGTAAGCAAAAGTTAGCTGCTACATCAAGAAGTGTTACTGCTCAGGAACCATTATGCAGAGATGTTGCAGCAGCAAAACCAAAGCCCCCAGTTAACATGTCTTACACGGGTGTGATAACGAAATGTCTCAAACCTGAAGGTGGAATTTATGAACTGGACGAAAAAATAAGACTGTACATTAATCACCAGCCCTGTGTAAATCTGGGCCGTGGCTTGCGTGTTGGTGCTCATGTTACCGTTCACAATGTTCATTTGTGTAGGAAAGGAAAGaAAGTTCTTGGATTGTGTTGCTGCACACAaagtacagtgaaaattatCAAGTTTTCATCCCTTGCATCACCTTGGAAGCCTTTCAGTCCTTGTGAAAGTCCGTTGGCGCTGTTAGGGCAGAACCTCACTCTTGCTGATTACGTAGACTTGCTGGAGATGTGTGATAAAGTTATTGAGAAGTTTTCGCCCTCTTACAGGACAAGTCAGTTGGTTGCTTACTCTGCCAGACAGAACCGGAAGGGAATCAGAGACGCGCGGCACAAGGAAAGTGTTTTGGAACAACTACTGTCCTTCATAAGAAATGACTCAGTTTCGAACAGAGCTCTACCAAGAAACATCTATGATGAATTTTTTGAGATACCTCACGAATGCCACCCAAATAGAATTAGTGAACTGCAATTTCCTTGGCTTCCAACTGTGAAGGAGTTTCTTGATGCAGTGAATCAAAAATGGGCGGAGGAACCCTGGCTGAACGGGCAATCAAAACGCATAACTGCTACACAGGAAAAAGAGGAATGGATGTACAAGATTCTGACTCAAGAATGTTTCAACCATCCAGTGCTTCTTGCAGGTTTGTTACGAAGCTCTTCAAAAACTGGTGGATTACGACTCGCTGATCAAACTGGAGAAGTCAGCTGTATCGTTACCCCCGTTGACCAACAATCCGTGGACCACGACTGTGTCGGAAATTGCTGCAAGACAAACTGCCCTTATGCACAGACATGGCATTCTAACGCCATGATTCAAATCAGCAAGTTTGAATTGATCACAGAGAAATTTAGGTCAAGTGATCTTAGTCAAGCGAGTTTATCTGAAGGTGGAAGCCGCACATATCTCCAATTCTCATTTGACAATGCAAAAGTTTTGATTTCTAAAGACACATGTAACCAGCGTGAGAAGGGAGGTTCTGGGAGGAAGAAGGAAACAGATGAAAGCGTGGATCGAGGATTTAAGAATGTTACAGACGCGAAGGGTCTTGAATTTATGTGCAAGATATTATTTATGGTAAGAAATTGTGAGCTTCCCACACTCCGAAAACTTAAAGAGGAAGTCTGTTACCCTTGTGGTGTAGaaattaaaattgttgctgTTCAAAAAAGTGACGTTGAAAATGTGACCACGGGAAGTAAGAGCACTAACTCAGAACGGGGTGACTCCTGTCCAAGTAGCTGTTTCTCTCTCTCAGAATTTCAGCTCCAAAGAAAAAACTCCGCCCTAAAACTTTTGAAGAAAAGCTTGTTTTGGTCCCGGTTTCTTCATCCGGGTTGTTTTTACGTCATCACGGAAAAGGTCCCGGACGAGGCAAGTTCCTGGATCTTTAGAAATGGTAATTTGGAGCTATTAATTAGCGTCAGTTCCAATATGGAATTAGAAAGAATTTGTTGGTGTGAAAGCTGTAGGCTAGCTGCCTTATCAACGGACTCAAGAAACAGTAAGGAGATTGGGAAAGTGCTGGATGACCTGAAAGAGGATTTTTTAAGAAATGATCAATTATGTACTGTAGACTCCATTCTTAGTGATACTGTGGGACAACAAGAAGAAAGTGAGAATTCTTTGCAACCAAGTCGTTCTTCCAACATGCAAATCAGCTTTCGAGGCGTCATCGTCAGCCGCGAGCTGCGCCAGTCTGACTCTCCCGGCAGCCAGCGGTTGCCAAAGGGACTGATAGAAGTACCAAAGTTTGGTCCTATTAAGGTTACAGCGGTTAAAGATCTACAGCTGGGGTTCACTCTGCTTAGCAATGCTATTATACTACTGAGAGTACAAGACCTTCGATCTCCAAACGCAATCGCTGTGTATTTAGACTTGAGGAGGACAAGCTATATCTATGGCATGCTGCCTGGTACCTTTGTCCAATTTCGAAGATTCGTAAGAAAATTTTCCCGCACGAGAAACATGTACTGCACTTTTGAAGCCTGTTCATCTATTGTTGTAGAAAGACGAACATTTTCAAAAATCACCGACCCTCGGCTCTCAGATGTCACAGCATCAACATCGGCCGAAGAAAATACAAAAGTTCTTCCCAATCGATATCTCATCGATCTTATTCGGAACGAGACCCAAGGGAACTTCATTCAGACTGTCTCACGCGTACGTTGTCGAGTAACCGCTGTCCAGAAAGCGAGTCTGCGCTGGTTGTGTAAACGATGCGGGGAGTTAGTATTTAGAAACGAATGTACCAGCGGCTGCTACAGTTCAGCGGGATATAAATTTAACGCTGAAGCAAGGTGTGTTGTGGAAGATGGGACGGGAGAGGCGCAGCTGTATGTCTATGATGAAATCGTCCAGACTTTACTGAAGCTGTCTTCTCAACAGTGGCGCCACCTTCAAGATATGGCCATGCGCACTGGGGAGCTTTTGTACCAGCGTCTCTGGCGAGGTGGAACCAGTCATCCTCAGCTCAATCAAGGAAACCAATCTTCCAGAGAAGCTGAGGCCAAGATGAACTTGGAGAACTATTGTTGTTCTTCAAAACTACAGCACCTGGTAGTCTTGCATTGTAAACTCTTCCGCTTCAGCAAGAGTGCAGCTGGTAACACTGATCAAGGGTATGAGAGTCGCAGCATTCACCTTGGCCTGACAGAACACAGCACCTTGGTGCTTCCCAAACTTCTGCTTAGGGCTGTGTCAATCACAGACGTGAGACCAGCGGACGAAATTCGTCAGTTACTTCAAGATGCCAAAGCTTAATATCTCGCTAAAGAGCGAAATATCTTGCAGTTATGAGCAGAATATGGTATAGTCAAGCTAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15489 all species →	CTC1	CST, telomere maintenance, complex subunit CTC1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029156 all species →	Family	CST complex subunit CTC1	Interproscan
IPR042617 all species →	Family	CST complex subunit CTC1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14865 all species →	CST COMPLEX SUBUNIT CTC1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003697 all species →	Molecular Function	single-stranded DNA binding	Interproscan
GO:0010833 all species →	Biological Process	telomere maintenance via telomere lengthening	Interproscan
GO:0042162 all species →	Molecular Function	telomeric DNA binding	Interproscan
GO:0045740 all species →	Biological Process	positive regulation of DNA replication	Interproscan
GO:1990879 all species →	Cellular Component	CST complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSHHBP00000020562.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.