Genomic Location: chr9:8331260...8337649
NR annotation: no NCBI-NR hit recorded
Species Porites divaricata · all data for this species · gene families
| CDS |
| ENSHHBT00000036414 |
| Transcript |
| ENSHHBT00000036414 |
| Protein |
| ENSHHBP00000030659.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005524 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03467 all species → | Smg4_UPF3 | Smg-4/UPF3 family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012677 all species → | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR005120 all species → | Domain | UPF3 domain | Interproscan |
| IPR035979 all species → | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR039722 all species → | Family | Nonsense-mediated mRNA decay protein 3 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13112 all species → | UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0000184 all species → | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
| GO:0003729 all species → | Molecular Function | mRNA binding | Interproscan |
| GO:0005730 all species → | Cellular Component | nucleolus | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0045727 all species → | Biological Process | positive regulation of translation | Interproscan |
ENSHHBP00000030659.1.
