Gene detail

Detailed information of ENSHNZP00000024726.1 in Turbinaria reniformis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation TRENI · all data for this species · gene families

Sequence

CDS

ENSHNZT00000030919

ATGAGAGAGGTCATAATTATTTCTGTTTGTATTAAGAAAGTAGGTCAAAGCAAGCTTTCGTTACATAAACCATGGACTACAACAGTTActgtaaacaaaaatatattctTCTTGGCAAGAGTAAAACTTTCCTTTACAGACACCGTTATTAGATTTGAACATTTACCAAAAGACACTAAAACAGGGATAGGATTAGAAATACACATTAAAAGAATTGATTACTCTGACCTATCAACTGAGCTTGCAGAGAGGGACAGTCACTACAAAGCCAAGAGCGTCTATGAACCAGCAGCATGTGCCTGCAAAAATCTCAAGATCTTTGGAATCTCTGTTCATTTGGATGAATTCCCTGAGGAATCAAGAACCATGCCTCAAGCTTCTGATTATCCTCAATCCCCACCGCCCTCCCCTGGTAGTGGTTCATGTTCTCCACCTCTCCACTACCCCCACAGTTCTCTTGAGGGACTTTCCTTGTCGGCTGAGCAATTCCGCAGCTCTCCCGTCTCAGGAAATCTTTTACCACAAATCAAGCTCGCCACTTTTGCTGGTCACTCTGAAATCAAGCTTAAACTGAAGCAAAATGTTGCTGTACCAGGTCCCAAGGTGGATGTTGAGTGCTTTCTTGGGACACTGAATGTATTCCTGTCGCCCAGACAAGTTCATTTGCTCACAGAGTTCTCAAGTGGTTTCTCATCTCCAGATGTGTGTAGCCACACCACAGTGAAAGGACACTCGGTCAACAAACCCATGCAACCAGAGGACTATCAAAAAATAGAACAAGATCTACAGAACCAGCTCATGTCCAAAAAACAGCAAGAACAAAGGCATCAACAGGGACAACAGAGGGTAGACTCATGGAACTTTAGCTTTGACTCATGTGTGACTAATGATGCACTCTCCCACTACTCCTCTGGCACTGATTATGACAGCATCTTAGGGGAAGAGGACGGGGAAACTTTCTATTCCATGTCATGTAACCAGGATGTGCTACCTCCTCTTGAAGAGCCTGTTTTACCTGCTGACATGTTGGCAATAAATAGATTGTCATCTGGAAATCTGTTACAATCACCAGAGTTCTCTCCTTTAGGGACTTTAGGAGGTGTGCGATCATCACCCTATAAGTTAATGAACACCATAGGAAGTGACAAGAGATTTGTAAACCACAAAATTCATTTACCAGGAACCCCTTTAGCAGAAGCTGCTAATAATGTGTTTGTCAATGCTAAGCAATCTGCATCAGCTGTTCAGGAAGTGAGAACAGATGGTCCTTCAAGACACAGTGTGTCATCAGCTAATCCTGGTCTAGCTGGCATAGCAGCCCTGGATGACCCCTGTCCTGATGTGATTAAACTGAGTGTTAAGCTTTCTAGCCTAGCCGTTACAGTGCTCCATATTGACCCAATGTTGTCACCCTCATCAGAGAGTAAAGGCTTTCAACTTGATGATGGTCGTATTGCCCATCCATTGGCTAACATGGCTGACAAGTTCTTCTCCAACCTTGGTACTTACGGATTTGGGGGAAAAGACTTCGAGGAGATGGCAGAGAAGTTTGCTGTTGCCTGTACGGCAGATCATCTTAGgtgTATGGCTGCCCCTGTGTCATTTGAATTTGAAAGGACAGTCAGTAGTTCACATCAAACAGGAAAGTGTGAATTGTCGGCAGGCAAACTGGAGCTAAGCGAGTGTTTGTTTGAAAGGTCGGCAACATCGGCATCCATTCCAACACCTTATTCCACTACACAGCTGGTTAAATGTTTGGCCAGTGAAAGTCCAGCAGCACCCTACTATGGATATAATCCAACTTCTACACTCCCTTGTCTTAGACTCAACTACAAGAGCACCCAGAGGACAACTTCTCCGGGTGCTGTTCAAGGCCGCAATGTAGTGTTGCCCAAGTCTGAGGTGTCACTAGAGCTTGGTGGCTTGCTTTGTGAGTTAGATATCTCTATAGTGGACAGATTGACAGCTCTGTTGGATCCACAGCCTCTGTTTATGAACCATAGCTCAAACATGCAATCCCGCATGTTCCGTTCCTGTAATCCATCAATGGTGAACCAGCAGGCTGTGTTTACCCAAGCCATGGAAGATACTCCCACAGTTGAACAGCCTTTTAATATCCATATGTCCTGTCCTTCACTAACTGTTGTCCTAAGATTTCCTATTCCTGACGTACGGCCTGTCGTGGATCGGCGTCCCTGGTGGAAACAATCCTTGAGACAGGAGTGCTTCTCATTTGAGTTTTCTGCTGTAGAATTCAACACTTCTCTCACTGGTCGGCCTGAACTTCCTTCTCACTACAGTTTCAGCTTCAAGGAATTGCATGGTCACTTCCAAGAGGACACCAACAGCAATAGTGTACCTGTTATAGACGTCACACATGGCCACTCTGATAACGAAACGGGAAATGGAGGCTTTGATTGGCCAAGGATTGCGATCACAGTTCAACCTCCTGCTCCTCTGTCCGCTTTAGAGGAAGTCCAGTCCTCAGATAACTCTCCACTCAGTTCCTTAGACGCCTATCCTGTTATGAAAGCCGAGCCATCGCCCTTCTCCTCCAGACCAGTCATGTTTGAGACGGAGGAGCTTTTAATGCCCGGAAGCCAGGAAGAAATGACCAAATTTCAAGATGACACAGTGTCGTCCTCTAAGATCCACGTGGAGTGCAGTTTCCCCAAGCTAGATGTTAACTTACACACAAAGGACGTGTTTGAGAACATTTACAACAGACTGGCGAGTGACTTGTTGCTATGGGAACCGATGGCTCCTTCCCCTGCTGAGCGGCCCGACCCGTGTGGGTTGAGTATTGGCGCAGGGTTGGACCTAGCAAGTCAGATGCTACAAGCCCAGGGACCTGATCGATTTGTCATGTGCAGATCTGGGCTACGAAGTTACGATGATGATGCATCCTCATCTGAAGATGAAAGTAGTAACCTGACGTCACTGGAAAATAAGTATAAGCGAACCACCGCAATCCCTAACGGCCAGACAAACTTCACGCTAACACTCAATGTCAGCAAGGCTAGACTGGCTGTTTTTCCTGTCAGTGAGGTACGATATCTAGAGGTTTCTTCGTCAAATAACAGTCCCTGTTCTGAAGAAGTGCTGGGAGAAATTGCAGCCGAGTTTAACGACGTTACCTTCTTCGTGGCGGCCTGTTACAAAAGTCAAGTTGATCTCAGCTACCTATGTCTCCAATCACAAAAGGTCGCTTTTCAGCACGCACCCGTGATACCACAGAGAGCCCACGCATCAATGGAGTCAGCGTTTAGTGGCGCGGAGCTCTTGTCCACTCTGTACCACACTGAACCGAGTATACGACAAGTTGACGGAAGAACTAGTGAACCGATGTTTGCCTTCGCCATTAAAGTATCTTCCGATACGGCAAAGAATATTAAGGAAATTCTATTTTCCCTGGGACTTCGAAGAATCACTCTTCGGCACAGAATGCTTTCTTCTAAACAGATGTGGATCACACAGCTCAAAAACTTCTTTGACGTGAAGGATGATCCGGTTCTTGGTTTCAGTCCCCCAGCGGTCGTGACAGTGTTTCATACGCACGTGTGGGAAGGCAGTATTGACTACAGACCAATCCATCTTCCTTTACGAGTTCTGGTTACCATGGAAACGTTCAGTGTTTCAAGTAACATCACGATCGAGTCCAATGTCTCTCTACTAAGATTTATTATCGATGATGCCGCATTGTACCTCTCTGACAAGTGTAGCGGATCTGCCAATATTAGAAACTATGTGTGTGTTTTAGATCTTGGAATGTTTGAACTGTCTCTATTTACGTGTGATGGGAGTGAACAGGGTCATCCTCAAGTGGAACTGCGCATGTCTAACAACACAGTTAACGTCAGAACTTGCTCGGATTCATGCTCCGCTCTGCTTCAACTGATACAGTACATTGCGGCAGATGGAGACCTGGTACCTAGTTATGAACAGGAAGAACCCGATGCCACGAAGACACCCTCGACTCCAAGCCGCTGTCCAGCTGAGCCGCCGTTCCAGCAAGGGTCCGTCGATGAGGGCACACTGAGCAGTATCATGACAGAGGCCATGGTAGATACGCACTCTCTGGCAGGGCCATCTCACGATAAGGGTCTTAAAGGAGAATTGAGCCATCAGCTGTCCAGGTCACCCAGGCGAGATCTATTCCTGTTTCCTGACGATGATTTAGCCAGTGCAATGGACGATTATTTCCCTGCTGAAGACAATAGCGCGGACTTGGGAACTCCAGGCGAAGCGGAAGACGACGAAGAGGATAGCGATGACGATTTCTGTATTCTAGAGCATCCTGATAAAGAGCCGGAGGGCTTGAGTCATGAGGTCATTATCAAGTGCCTGACAGATGAACAAGTCAGCATTGTGGACAATCATTTCACTGTTCCAATTGGTCCAAGTGATCAACTGAGCGCCCCCAGTCATTTCCCGCCAGCGGTGTTCTGTTACACGTTAAAGGAGATGTCGGTGGTGTGGCACTTGTTTGGTGGAAGAGACTTCGGTGGAACACCATCACGTGACCAAAGAAAAAAAATAAGCTTCGCACTAGACGAGAAAGGACAACCGGTTGATGGCTCCACTGCCAGACCTACCGTGTTACTTCCTAACAGAACGGCTGCTAAGAACTCCAAGAAACTCACACGGAATAGCGGAGGACCCGACAGGAATAATCATGTGTTGATGGAGATTTATTTGAACAAGATTCGTCTGCAGTACGAGGAGTACCCTGAACACACTGAGCAGGCCTCTCGATTGGTGGTGCTTGTACAGGATGTAGAGATAAGGGACCGCTTGGCTCATTCACAGATAAACAAGTTCCTGTACCAGTACACGTCTGAGGCCTGTCCAAAACAGTCCCATGCTAACATGATTTTGCTCAAGATGCTGTATATTCGTCCTGATGCTGGTATCAAGGCGCAGGAGTGTAATCTCAGAGTCTCTATTCAGCCGCTTAGACTCAACGTAGACCAGGATGCCTTGTTTTTCTTGAGGAATTTTTTCTCGGAAATCATGGGGGAAGCTGCTAAAAATCCTAAAGGTTCAACCGCTGTTGATTCTAGTCCCGTGAAGCCGGCCCCATCATCTGATTGGTTAACAGAGGCCTCTGATCCGGAAGCGACACTGGTGAACTCAGCTAGCGAGTCCGAAGCAGATAGTTCTGAACCAGCCCCTACTTTCTTTAGGTCCTTTATATTTTCTCCAGAGGTACCTATCAGATTGGACTATCAGGGAAAGAGAGTTGATATGGAACAGGGTACCTTGGCTGGCCTACTGATCGGTCTTGCACAGCTAAACTGCTCCGAGCTGCGCCTGAAGCGCTTGTGCTGCCGTAGTGGCTTGCTGGGTATAGACAGGGTTATAAACTACGCCCTGTCTGAGTGGCTGACAGACATCAGAGGCACTCAGCTGCCCGGGATACTGGGTGGAGTGGGCCCTGTGCACTCGTTTCTACAGCTGTTTCAGGGATTGGTTGACTTGGTGTGGCTTCCTATTGACCAGTACCGCCGAGATGGGCGTGTCATGAGGGGCCTACAGAGGGGAGCCAATTCTTTCACCACCTCATCTGCTATGGCTTTCCTTGAACTTACCAACAGAGTTGTACAGATGATACAGGCGGCGGCCGAGACAGCTTATGACGTAGTGAGTCCAGACTCAGTCTCCCCATTGAAGCGCGGCCAGAATCGCTTGGCTCAACAGCCCGCTGATCTGCGGGAAGGTGTTACTAATGCCTATCAAGTCTTCAGAGAGGGACTTGGCCAAACGGCCACAAATATCGTGCAAGTCGCCAAAGAAGAACACGAACAGAAAGGCGTAACAGGGGCTGTGGGAGGAGTCCTTCGCCAGGTCCCCGCCACTGTGGTCCAGCCCTTTATCCTGGCTACAGAAGCTACATCCAATGTCTTGGGAGGGGTCCGTAACCAAATCCTGCCTGATGCGCGGCGAGAAGCCGCGGAAAAATGGCGAGCAATTCCTTAA

Transcript

ENSHNZT00000030919

Protein

ENSHNZP00000024726.1

MREVIIISVCIKKVGQSKLSLHKPWTTTVTVNKNIFFLARVKLSFTDTVIRFEHLPKDTKTGIGLEIHIKRIDYSDLSTELAERDSHYKAKSVYEPAACACKNLKIFGISVHLDEFPEESRTMPQASDYPQSPPPSPGSGSCSPPLHYPHSSLEGLSLSAEQFRSSPVSGNLLPQIKLATFAGHSEIKLKLKQNVAVPGPKVDVECFLGTLNVFLSPRQVHLLTEFSSGFSSPDVCSHTTVKGHSVNKPMQPEDYQKIEQDLQNQLMSKKQQEQRHQQGQQRVDSWNFSFDSCVTNDALSHYSSGTDYDSILGEEDGETFYSMSCNQDVLPPLEEPVLPADMLAINRLSSGNLLQSPEFSPLGTLGGVRSSPYKLMNTIGSDKRFVNHKIHLPGTPLAEAANNVFVNAKQSASAVQEVRTDGPSRHSVSSANPGLAGIAALDDPCPDVIKLSVKLSSLAVTVLHIDPMLSPSSESKGFQLDDGRIAHPLANMADKFFSNLGTYGFGGKDFEEMAEKFAVACTADHLRCMAAPVSFEFERTVSSSHQTGKCELSAGKLELSECLFERSATSASIPTPYSTTQLVKCLASESPAAPYYGYNPTSTLPCLRLNYKSTQRTTSPGAVQGRNVVLPKSEVSLELGGLLCELDISIVDRLTALLDPQPLFMNHSSNMQSRMFRSCNPSMVNQQAVFTQAMEDTPTVEQPFNIHMSCPSLTVVLRFPIPDVRPVVDRRPWWKQSLRQECFSFEFSAVEFNTSLTGRPELPSHYSFSFKELHGHFQEDTNSNSVPVIDVTHGHSDNETGNGGFDWPRIAITVQPPAPLSALEEVQSSDNSPLSSLDAYPVMKAEPSPFSSRPVMFETEELLMPGSQEEMTKFQDDTVSSSKIHVECSFPKLDVNLHTKDVFENIYNRLASDLLLWEPMAPSPAERPDPCGLSIGAGLDLASQMLQAQGPDRFVMCRSGLRSYDDDASSSEDESSNLTSLENKYKRTTAIPNGQTNFTLTLNVSKARLAVFPVSEVRYLEVSSSNNSPCSEEVLGEIAAEFNDVTFFVAACYKSQVDLSYLCLQSQKVAFQHAPVIPQRAHASMESAFSGAELLSTLYHTEPSIRQVDGRTSEPMFAFAIKVSSDTAKNIKEILFSLGLRRITLRHRMLSSKQMWITQLKNFFDVKDDPVLGFSPPAVVTVFHTHVWEGSIDYRPIHLPLRVLVTMETFSVSSNITIESNVSLLRFIIDDAALYLSDKCSGSANIRNYVCVLDLGMFELSLFTCDGSEQGHPQVELRMSNNTVNVRTCSDSCSALLQLIQYIAADGDLVPSYEQEEPDATKTPSTPSRCPAEPPFQQGSVDEGTLSSIMTEAMVDTHSLAGPSHDKGLKGELSHQLSRSPRRDLFLFPDDDLASAMDDYFPAEDNSADLGTPGEAEDDEEDSDDDFCILEHPDKEPEGLSHEVIIKCLTDEQVSIVDNHFTVPIGPSDQLSAPSHFPPAVFCYTLKEMSVVWHLFGGRDFGGTPSRDQRKKISFALDEKGQPVDGSTARPTVLLPNRTAAKNSKKLTRNSGGPDRNNHVLMEIYLNKIRLQYEEYPEHTEQASRLVVLVQDVEIRDRLAHSQINKFLYQYTSEACPKQSHANMILLKMLYIRPDAGIKAQECNLRVSIQPLRLNVDQDALFFLRNFFSEIMGEAAKNPKGSTAVDSSPVKPAPSSDWLTEASDPEATLVNSASESEADSSEPAPTFFRSFIFSPEVPIRLDYQGKRVDMEQGTLAGLLIGLAQLNCSELRLKRLCCRSGLLGIDRVINYALSEWLTDIRGTQLPGILGGVGPVHSFLQLFQGLVDLVWLPIDQYRRDGRVMRGLQRGANSFTTSSAMAFLELTNRVVQMIQAAAETAYDVVSPDSVSPLKRGQNRLAQQPADLREGVTNAYQVFREGLGQTATNIVQVAKEEHEQKGVTGAVGGVLRQVPATVVQPFILATEATSNVLGGVRNQILPDARREAAEKWRAIP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13329 all species →	ATG2_CAD	Autophagy-related protein 2, middle RBG modules	Repeat	Interproscan
PF09333 all species →	ATG2-VPS13_C	ATG2/VPS13, C terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026849 all species →	Family	Autophagy-related protein 2	Interproscan
IPR028565 all species →	Domain	Mu homology domain	Interproscan
IPR026885 all species →	Domain	Autophagy-related protein 2, middle RBG module	Interproscan
IPR015412 all species →	Domain	Atg2/VPS13, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13190 all species →	AUTOPHAGY-RELATED 2, ISOFORM A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000045 all species →	Biological Process	autophagosome assembly	Interproscan
GO:0000407 all species →	Cellular Component	phagophore assembly site	Interproscan
GO:0000422 all species →	Biological Process	autophagy of mitochondrion	Interproscan
GO:0006914 all species →	Biological Process	autophagy	Interproscan
GO:0032266 all species →	Molecular Function	phosphatidylinositol-3-phosphate binding	Interproscan
GO:0034727 all species →	Biological Process	piecemeal microautophagy of the nucleus	Interproscan
GO:0044805 all species →	Biological Process	obsolete late nucleophagy	Interproscan
GO:0061709 all species →	Biological Process	reticulophagy	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17906	ATG2; autophagy-related protein 2	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.