Gene detail

Detailed information of ENSHNZP00000025089.1 in Turbinaria reniformis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Turbinaria reniformis · all data for this species · gene families

Sequence

CDS

ENSHNZT00000031444

ATGGGTGCAGATGGTAAGTTTGATCTGAGGGTTGTGGAGAGCCGTACTACCTCAGGAACATCAGGAGAACCCTCATCTCCAGCCCCTAGCGAAGTGGGACCTTCTACCGAAGACACTGAAATGTTATCACCTGCGGAACCTCAACAAGGGAGTTCCTCGACGTCCCAAGATACAGATGTGTATAGTGAGGTGTTAGTGGAGGCTGTAAGAGTTGAGGATATACCCGATGAAGGCATATTTACTTCGGATGACATTATTGAGTCGCCTGGAACTGAAACATCAGTGATAGTGTTAGAGGGATCAGGAGACATCAGCGCAGAGGCTGTGCCATGCATTGATGATCCGAAAGAAACTGTCAGTGAATCTGCAGAGGTCACAGGAGGGGAGAGCATCACCAGTGAACCTGTTAACTCTACAGCGACGGAAGCTGCCAGCACTAACAACGCCTCTGTTAATATTGGTGCCGTGGGTGAAACTGCACGAAGGTTACTTAGCTCAGCTGTCAATGCAGCTAACAGCCAAGGCAGCAGCCTGTCCCGCGCATCTGACCTGGATATGTATGTGGCAATGAGAGGTTCAGGTCTGCTGACAGGACTGGATGATGATTATGATCTGCCAGAAcctgatgatgatgacgatgacgacgatgatgacgatgatgatgatgaaaacgACGAAGAAAATGAGGATGATTATGAGGTTGAAGAAGAGCCCGAGTCACGTGGTGGTCGCCGTCGCACGTGGGATGATGAACACGTGCTTAAGAGGCAATTTTCCGCGCTGGTGCCAGCCTTTGATCCCAGACCAGGAAGAACTAACATCGCTCAAACACAGGATATTGTGATTCCTGCTCCTGGATCCTCAGAGAGCGTTTCATCAGAGATGGCTACAACGATTCCTGAACCACGCCTGCAGTTGACACTGAAGGGTCCAGCATCATTAATGCTTCCGGAGGTGGAGATTTCCCTTGATGACCCGAAGGCCACCATTTTTTCGTATGTACAGAAGGTCGCGCTGGCTGCTGGAATATCCAAAAATGAACGCGTGAGAAGGGTTTGGGAACCAACTTATACAGTCAGCTATGGAGAGGGTCATAGTCCTGATGAAGTTGAGAGCCCAGGAGAAAGCAAAGAAGACACGGAAACAATGGTTCACTGGACGATATCGTACGTGGAGCGATATCTGGGCACAGATGAGCTGCCCAAGTCTGAAGTGATCTCTTTCCTCCAGAGGCACGCTGATGATGCATTTCTTAGAAAGTGGAAGTTAACAGGAGTTCCAAAGAGTATACGCAAGAACAGAAACTGCTCACAACTCGTGGCAGCCTATAAGGAATTTTGTAATACCCTTGAGTCGTCCCCTCCGACCTCTCCTCTGCTTGAAAAGCCTGAAGTCAAACAAGAGGTGAAACAGGAACCAGCGAAGAAGGACAAGAGTGCGGCCGACTCTGTTCCTGCTGGTGTTATGGACATATCTACTATTGAAGATATCCTTCAGCTGCTTAAAGTCCTGTATTGTATATCTACTAACTCGGCGTACGACTTTGGAGAGGGAGATAACGAAAAGTACGGATTTATCGTAGACAATGAAGATTTTACAAGTAAAAAGCTGACAACCAAACTATTACAGCAAATTCAGGACCCGCTGGTGTTGTCAAGTAACGCGCTACCATCATGGAGTGAAGTGTTGACCAGCACATATCCATTCTTGTTTCCTTTTGAGACAAGGCAGTTGTACTTTTCATGCACGGCTTTTGGCAGCTCAAGAGCGATCGTTTGGCTTCAAAACAAGCGCGACGTAGCGCTTGAGCGGAGCCGTCCCCCAAGTCATCGACGGGAAGATCAACACGAGTTTAGGGTGGGGCGACTGAAACACGAGAGGGTCAAGGTACCGCGAGGGGATGAGTTGCTGGATTGGGCAATGAACGTACTCAAGTACCACGCTGAACGCAAGTCTGTGTTGGAGGTCGAGTTTGAAGACGAGGAGGGCACTGGGCTGGGGCCTTCGCTCGAGTTTTACGCTCTTGTGGCGGCCGAGCTTCAACGCAAGAGCCTGGGCATGTGGATTTGTGATGACGTCATTGTGGATGAAACTGCCAGAGAGGTTGATATTGGTCACGGCATTCGCCCAAGGGGCTATTACGTGCAACGCGCAGGCGGCCTCTTCCCCGCGCCCCTGCCTCAGGATGCTCCTGACACGGAGAGGGTTGCAAAGCTGTTCTACATCCTGGGTATTTTCCTTGCTAAGAGTTTACAAGACGGTCGATTAGTGGACATTCCTCTATCGCTATCATTTTTAAAGCTGTTGTGTTGGAGAGCGTCGAGTTCAAGCTCTAACAGCGCTGTGAGTCACAGTCGCGGCTCAGCTTTAAAAGTAATCGATGACGCGTCGTGCTCGCTCGAGGATTGCGTGGATAGTTCGGACACGACGAACGAGCTCGATGAACCTCAACCGAGCCTGGAAGAGAACGAGAATGCAATTAATAAATTGGACTGGGAATCAAGCAAAGAAAGGGAACTTATAGAAGAAAACGAGGAACTGTCTAAGGAAGAAGATTCTGAATTAAGTAAAACTAAAGAAAGCGTTGAGGACATTCCTTCAACGCCTGCAACGCCATGCTGGTTTGCGGGCATTTTGGACGATAGTGATATGAACGTTGTGGATCCACACAGAGCCACTTTTCTAAAACAACTCCAAGAATTGGTCGCTAGGAGAAATGACATTGTTATGGACGATTTGTTGTCAGCCAACGAGAAGAAAGCCAGGATATCAGGGCTCAAGCTGAAAACGGCTCACGGTGTTGAATGTAGTGTTGATGATTTAGGATGTTAA

Transcript

ENSHNZT00000031444

GTTGGGTAGAAGTGGCCTGGAATAATGGAACCTCTAACTCATATCGAATGGGTGCAGATGGTAAGTTTGATCTGAGGGTTGTGGAGAGCCGTACTACCTCAGGAACATCAGGAGAACCCTCATCTCCAGCCCCTAGCGAAGTGGGACCTTCTACCGAAGACACTGAAATGTTATCACCTGCGGAACCTCAACAAGGGAGTTCCTCGACGTCCCAAGATACAGATGTGTATAGTGAGGTGTTAGTGGAGGCTGTAAGAGTTGAGGATATACCCGATGAAGGCATATTTACTTCGGATGACATTATTGAGTCGCCTGGAACTGAAACATCAGTGATAGTGTTAGAGGGATCAGGAGACATCAGCGCAGAGGCTGTGCCATGCATTGATGATCCGAAAGAAACTGTCAGTGAATCTGCAGAGGTCACAGGAGGGGAGAGCATCACCAGTGAACCTGTTAACTCTACAGCGACGGAAGCTGCCAGCACTAACAACGCCTCTGTTAATATTGGTGCCGTGGGTGAAACTGCACGAAGGTTACTTAGCTCAGCTGTCAATGCAGCTAACAGCCAAGGCAGCAGCCTGTCCCGCGCATCTGACCTGGATATGTATGTGGCAATGAGAGGTTCAGGTCTGCTGACAGGACTGGATGATGATTATGATCTGCCAGAAcctgatgatgatgacgatgacgacgatgatgacgatgatgatgatgaaaacgACGAAGAAAATGAGGATGATTATGAGGTTGAAGAAGAGCCCGAGTCACGTGGTGGTCGCCGTCGCACGTGGGATGATGAACACGTGCTTAAGAGGCAATTTTCCGCGCTGGTGCCAGCCTTTGATCCCAGACCAGGAAGAACTAACATCGCTCAAACACAGGATATTGTGATTCCTGCTCCTGGATCCTCAGAGAGCGTTTCATCAGAGATGGCTACAACGATTCCTGAACCACGCCTGCAGTTGACACTGAAGGGTCCAGCATCATTAATGCTTCCGGAGGTGGAGATTTCCCTTGATGACCCGAAGGCCACCATTTTTTCGTATGTACAGAAGGTCGCGCTGGCTGCTGGAATATCCAAAAATGAACGCGTGAGAAGGGTTTGGGAACCAACTTATACAGTCAGCTATGGAGAGGGTCATAGTCCTGATGAAGTTGAGAGCCCAGGAGAAAGCAAAGAAGACACGGAAACAATGGTTCACTGGACGATATCGTACGTGGAGCGATATCTGGGCACAGATGAGCTGCCCAAGTCTGAAGTGATCTCTTTCCTCCAGAGGCACGCTGATGATGCATTTCTTAGAAAGTGGAAGTTAACAGGAGTTCCAAAGAGTATACGCAAGAACAGAAACTGCTCACAACTCGTGGCAGCCTATAAGGAATTTTGTAATACCCTTGAGTCGTCCCCTCCGACCTCTCCTCTGCTTGAAAAGCCTGAAGTCAAACAAGAGGTGAAACAGGAACCAGCGAAGAAGGACAAGAGTGCGGCCGACTCTGTTCCTGCTGGTGTTATGGACATATCTACTATTGAAGATATCCTTCAGCTGCTTAAAGTCCTGTATTGTATATCTACTAACTCGGCGTACGACTTTGGAGAGGGAGATAACGAAAAGTACGGATTTATCGTAGACAATGAAGATTTTACAAGTAAAAAGCTGACAACCAAACTATTACAGCAAATTCAGGACCCGCTGGTGTTGTCAAGTAACGCGCTACCATCATGGAGTGAAGTGTTGACCAGCACATATCCATTCTTGTTTCCTTTTGAGACAAGGCAGTTGTACTTTTCATGCACGGCTTTTGGCAGCTCAAGAGCGATCGTTTGGCTTCAAAACAAGCGCGACGTAGCGCTTGAGCGGAGCCGTCCCCCAAGTCATCGACGGGAAGATCAACACGAGTTTAGGGTGGGGCGACTGAAACACGAGAGGGTCAAGGTACCGCGAGGGGATGAGTTGCTGGATTGGGCAATGAACGTACTCAAGTACCACGCTGAACGCAAGTCTGTGTTGGAGGTCGAGTTTGAAGACGAGGAGGGCACTGGGCTGGGGCCTTCGCTCGAGTTTTACGCTCTTGTGGCGGCCGAGCTTCAACGCAAGAGCCTGGGCATGTGGATTTGTGATGACGTCATTGTGGATGAAACTGCCAGAGAGGTTGATATTGGTCACGGCATTCGCCCAAGGGGCTATTACGTGCAACGCGCAGGCGGCCTCTTCCCCGCGCCCCTGCCTCAGGATGCTCCTGACACGGAGAGGGTTGCAAAGCTGTTCTACATCCTGGGTATTTTCCTTGCTAAGAGTTTACAAGACGGTCGATTAGTGGACATTCCTCTATCGCTATCATTTTTAAAGCTGTTGTGTTGGAGAGCGTCGAGTTCAAGCTCTAACAGCGCTGTGAGTCACAGTCGCGGCTCAGCTTTAAAAGTAATCGATGACGCGTCGTGCTCGCTCGAGGATTGCGTGGATAGTTCGGACACGACGAACGAGCTCGATGAACCTCAACCGAGCCTGGAAGAGAACGAGAATGCAATTAATAAATTGGACTGGGAATCAAGCAAAGAAAGGGAACTTATAGAAGAAAACGAGGAACTGTCTAAGGAAGAAGATTCTGAATTAAGTAAAACTAAAGAAAGCGTTGAGGACATTCCTTCAACGCCTGCAACGCCATGCTGGTTTGCGGGCATTTTGGACGATAGTGATATGAACGTTGTGGATCCACACAGAGCCACTTTTCTAAAACAACTCCAAGAATTGGTCGCTAGGAGAAATGACATTGTTATGGACGATTTGTTGTCAGCCAACGAGAAGAAAGCCAGGATATCAGGGCTCAAGCTGAAAACGGCTCACGGTGTTGAATGTAGTGTTGATGATTTAGGATGTTAACAATAGAAAACGCCGAGGAGTACATCAAACTAGTGAAAGAATTCTGTTTGTACACCGGCATTCAACGGCAGTTAGACGCATTCAAAG

Protein

Gene family

Family type	Membership / link
Ubiquitin family	E3\|E3 activity\|HECT · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18410 all species →	BTHB	Basic tilted helix bundle domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035983 all species →	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR041200 all species →	Domain	FKBP3, basic tilted helix bundle domain	Interproscan
IPR045322 all species →	Family	E3 ubiquitin-protein ligase HECTD1/TRIP12-like	Interproscan
IPR000569 all species →	Domain	HECT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45670 all species →	E3 UBIQUITIN-PROTEIN LIGASE TRIP12	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0016607 all species →	Cellular Component	nuclear speck	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0048856 all species →	Biological Process	anatomical structure development	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0070534 all species →	Biological Process	protein K63-linked ubiquitination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSHNZP00000025089.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.