Detailed information of ENSIHXP00000003016.1 in Madracis auretenra

Genomic Location: :...
NR annotation: KAJ7356018.1, ATP-dependent RNA helicase ddx1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90WU3ATP-dependent RNA helicase DDX1 OS=Gallus gallus OX=9031 GN=DDX1 PE=1 SV=1
Q4R7L5ATP-dependent RNA helicase DDX1 OS=Macaca fascicularis OX=9541 GN=DDX1 PE=2 SV=1
Q5XH91ATP-dependent RNA helicase DDX1 OS=Xenopus tropicalis OX=8364 GN=ddx1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00622SPRYSPRY domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR003877DomainSPRY domainInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47958ATP-DEPENDENT RNA HELICASE DBP3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13177DDX1; ATP-dependent RNA helicase DDX1EC:5.6.2.7
Transfer RNA biogenesisko03016deepkoala

TOP