Gene detail

Detailed information of ENSIHXP00000010430.1 in Madracis auretenra

Genomic Location: :...
NR annotation: XP_027036343.1, hemicentin-1-like isoform X4 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSIHXT00000011219

ATGTTGTGCCGTGCAGATAGCGTACCAGAACCTACAATCACCTGGAGAAAGAAAGGCAGTAGTGAGGTTCTTACATATGGTGAACAGCTTCATATAGTTAATGCCTACAGCAGTGATGATAGCGCATATACTTGTACTGCAAGCAATTATCTTGGGCAGGACACAAAAGAAGTCACTCTAAATGTTCAAACGCATCCAAAGATCGAGACTTCCAGCTCTACAGTCACAGAGATACCAGCCAATGAAGGAGAGGAAGTGGTCTTAACTTGTAGTTTTAGCGGAAAGCCGCTTCCTAGTCCATTATGGAAAAGAAAACTTAACAGTACTGAATTGAAAGCATCCAATGATTCTTACGTTAAAAACATCACCGAGAAGAACGGCACTTGCGTTATGAAAGTCATTGTCAGCAAAATTGGTGAACATTTCTACTGTGTTGCTGCAAACCTCCTGGGAAGTGATAACCTGAGATATACGATACGAAAAAGAGGTGTTCCAGATCCTCCAAGTGATATTAAGCTGGTGGCATTTAAAGTAGCAGATGCCAAGACCGTTAGTGTCAATGTCAGCTGGACTCCTGGATACAGTGGAGGATATGAACAAGAATTTACTATTTATTATCGCGTTAAAGGAACCGGAAGTGACTATGCGGAACAATCTGTTGGGCACTTGGATAATAACATGTACACTATACAAGGACTATACCCTGAAACGGAATACGAATTCATTGTTCAAGCTTCCAATCAAGCTGGCAATGGTCAGGCATCAGCTTTAGCCAACGTTGCGACGCCTGAGTCCTCAATACCACCAGACAGAGGAACAGTCAACGCAACAAGAATCCCAGATGATGTCACAGTAATACTGGTTGAATGGACAATAGAAGATCAAGTAGTAACAACTTTGAGTCTTGAGATCCAGCAGGGAGGGGAGGGTCAGTGGGAGCCTGTCACAGGAGCAAGTAACATGAGTAGATCCATAAAACAGTGTAAAGTGACTGATCTCAAGGCTGACGAGAGATACAGGTTTAGAATGGATATGAGACGATCAGGGGAGCTGATTCCTGTATATGTGTTCAGTGACTTAGTGCCAGCTGGTCATGTTGATGCTATACCAGAAAAGAGGGAAAGTGCCGCGTTCCTCAAAAACTGGATGATGGCTGTCATTGCTGGCCTTTCAGGAGCAATTCTTCTGACCGCTCTTATTTTTTGCCTTTGTTACTACAGGCGCCGTCGCAAGACAGTTGATAAAGTTGACAATGCTAAAAAGAATCCAACTTCAAGcTATGTAGTGGGTGGTCCAGATGTCGCCCCTACCATGGAAGGGAAAAGCTATGGCAGGGAATCTATTGAAGATGATCCGTTTGTTGTCGCTGCATCCATGCAGGCCTTGAATTCAGTGgatggaaaaaagaaaaaacttgatGCCAGTATCAACTACGGATACCTGCATGAAGACTCTGGTCAACAACAACCAGAGATGCTGCTCAAAGCAGGCTCCCGTCAGGTGCAAAACGGCCATGTAGCAAAGAGTACCGGGAAACCCGATGCAAACTCAGCATACCCAGCTAAAGGACCACAGAGAGATCTCAAATCGTTTGGAACAAGTGTTGAACTTGTTAGAACTCTAAACAGACATGCAAATGCCATCGAGAATCCAGTTTACTCAGCAGTGGACAAGCAGGAGTTTGTTTCTGGACCAAAGGCGTCAACTTTACCTTTGTCTTCCAAACAGCAAAACGGTGTCATAAAAGGGCCTCTTGATCCAACGGTGCCTTACGCGACAGTACACAAGAAAAAGAAGGCCAAGAATCCTCGTCATGAGCCACACGAGCCAGCAAGTGAGCCTCCCCCACGGTACACCCCAGAGGACAAACCTCCTGAAGAGCCTAATTTGGGAGACTTAGATTTGGATGACCCTTCCAGTCTTCCACCTAGCGAGAGACCTCCAGACCAACCGACCCCCATACCCATGTTGCCTAACAAGCAGTCATCCAACAATTACCACAAAGATCGACGTAATGGGTCACCTGGACCTCCGGGCTTTTTTTATATACCTGTCAACCGAAAGGCCCGCTCTCACACGTACGGCGCGAAAATGGCACAGCAACCACCTCCTCCAGGACGACCAAGAAAGCGTTATGCTACCATCGATGGTCAACTCGTGAGGCTGAACTCACAAGATTCGGAGGATTTTCGGAGACCTGAGTCGACACAAAAGACACTCGGCCCAAACCCGGAAGAACCCACGGATTATGAATCCGACATCAGAGGAGTGCCGAATATGAATTATGTTAGTTACCTCGTGTGA

Transcript

Protein

Uniprot

Uniprot term	Description
D3ZB51	Protein turtle homolog B OS=Rattus norvegicus OX=10116 GN=Igsf9b PE=1 SV=1
E9PZ19	Protein turtle homolog B OS=Mus musculus OX=10090 GN=Igsf9b PE=1 SV=1
P0C5H6	Protein turtle homolog A OS=Rattus norvegicus OX=10116 GN=Igsf9 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06777	PTPRD; receptor-type tyrosine-protein phosphatase delta	EC:3.1.3.48	Protein phosphatases and associated proteins	ko01009	deepkoala