Genomic Location: chr2:22481410...22495684
NR annotation: XP_022790588.1, LOW QUALITY PROTEIN: putative helicase MOV-10 [Stylophora pistillata]
Species Madracis auretenra · all data for this species · gene families
| CDS |
| ENSIHXT00000016131 |
| Protein |
| ENSIHXP00000014846.1 |
| UniProt accession | Description |
|---|---|
| Q0V8H6 | Putative helicase MOV-10 OS=Bos taurus OX=9913 GN=MOV10 PE=2 SV=1 |
| Q9HCE1 | Helicase MOV-10 OS=Homo sapiens OX=9606 GN=MOV10 PE=1 SV=2 |
| Q5ZKD7 | Putative helicase MOV-10 OS=Gallus gallus OX=9031 GN=MOV10 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000818 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21634 all species → | MOV-10_beta-barrel | Helicase MOV-10, beta-barrel domain | Domain | Interproscan |
| PF13087 all species → | AAA_12 | AAA domain | Domain | Interproscan |
| PF13086 all species → | AAA_11 | AAA domain | Domain | Interproscan |
| PF21635 all species → | Mov-10_helical | Helicase MOV-10, helical domain | Domain | Interproscan |
| PF21633 all species → | MOV-10_Ig-like | Helicase MOV-10, Ig-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR049080 all species → | Domain | Helicase MOV-10-like, beta-barrel domain | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR026122 all species → | Domain | Helicase MOV-10/SDE3, DEXXQ/H-box helicase domain | Interproscan |
| IPR045055 all species → | Family | DNA2/NAM7-like helicase | Interproscan |
| IPR003593 all species → | Domain | AAA+ ATPase domain | Interproscan |
| IPR041679 all species → | Domain | DNA2/NAM7 helicase-like, C-terminal | Interproscan |
| IPR047187 all species → | Domain | Upf1-like, C-terminal helicase domain | Interproscan |
| IPR041677 all species → | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
| IPR049079 all species → | Domain | Helicase MOV-10, helical domain | Interproscan |
| IPR013087 all species → | Domain | Zinc finger C2H2-type | Interproscan |
| IPR049077 all species → | Domain | Helicase MOV-10, Ig-like domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10887 all species → | DNA2/NAM7 HELICASE FAMILY | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0032574 all species → | Molecular Function | 5'-3' RNA helicase activity | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0035194 all species → | Biological Process | regulatory ncRNA-mediated post-transcriptional gene silencing | Interproscan |
| GO:0043186 all species → | Cellular Component | P granule | Interproscan |
| GO:0016887 all species → | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0004386 all species → | Molecular Function | helicase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K18422 | MOV10; helicase MOV-10 | EC:5.6.2.5 | Chromosome and associated proteins | ko03036 | deepkoala |
Genes whose expression across the transcriptome samples of Madracis auretenra tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Madracis auretenra, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
