Gene detail

Detailed information of ENSIHXP00000025303.1 in Madracis auretenra

Genomic Location: not available for this species
NR annotation: KAJ7389516.1, Swi SNF matrix associated, actin dependent regulator of chromatin [Desmophyllum pertusum]
Species Madracis auretenra · all data for this species · gene families

Sequence

CDS

ENSIHXT00000027485

ATGCAGTCCTCACGAGGTAACACGGGAAGTACATGTAGTAGTGTTGTCAATTCTTCAATGTGCTCAATGCAAAatgatgcatgtacatgtaaggaaCGCTCGGTAACGAAAATTGTCGTTGAAGATAGTGATACAGAGGAAACGGATGTAACTACGATCTGTCCTGATGACGATTCCTCGGATGACTTTCAAGTTTCAAGCATGAAAAAGACTCAGGTCGCCCCTCCACCAGTCACACAGAAGCCTAGCAAAGGCAAAAAGCGAAAGGCCATTAACaaatcgaaaacaaaacaaaaggcgGCAAACCGAGGAGCTAAGAATTGTAACAGTAGAAGGCAACCGCCTGCTGATTGGTCGTGTAACGCTTGTACTTTTATTAACGATGGACAGCTTTTGGAATGTTCAATCTGCTTCACACCACGTGCTAAAGCTGACGAGACAGCGTGCATTGTTAACGATGACGATTTGAGTATTGAGATGTTGAATGGGCGAGATCGTGATGACGTCAGAATGGTTGATAATAACGACCTATCAGAAGTACGGGTGGACATCAATTATATTGACGAAAATTGTGGCATGATTGGTGCAATTGCGAAACACGACGGGTCATCACAGCGCGTTATTACCTCTCCACAACTGACACCTCTTCTTGACAATCAACAGACTGTAGAGCTTCATGCAGCTGAAAGCACTATAGCCTACAACTTCCCGAGTGAGTCAATGACAACACCGCCAGATGTGTCAAAGACGACTGGCAAATCTACTGTTCTTGGGCAGCAGCCGACTATTGATGTCTCTAAGAATAGTCAGATTGCAGAGCCTGCCTTGCCATGCTCGGTTTGCACCTTTTTGAATTTGTCAGAACTGATTGAATGTTCGATATGTTTGACTCCAAGAAGACGTAGTCAGAGGCTGAGTGCAAGTAAGAGTGTACTCACAGTGGAAACAGAGAGAGAGGTCAGTATGAGCAAGACGACGTCAAATAAGAGGAGGAGATGGAAGGGAGACAAAAAGGAGAAAGGTGAGAAGCCACAAGAAATAGACGTAGAGGACGGTAGAGATACCTTCGGTTTGATACCTTTGGATGAATCTACTGACAGCACAACAGCTCATTGTGACCATGACATTCCAATGGCAGAGGATGACGGCTTGACACCAGAACCAGTGGGATCACCCCATGATACAGGTACATGTAGTAGTACCAGTCACACGCAGCATGGACATGAAGTCTCGAGTGGGGAGAGTTCTGGAGAGATCACGTTGAAGCCACGAAAGCGGCTTAGACTGGAAGACGTCGAAGCGGACAACGACATTCGCGATTTTTCAGATGATTCAGATGTTTTGTGCAATAGCAGAGCATTAACGTGTTCCTCGACAATTTCCTCCTCTACAGGTCCAAAAGAGTTGGTAGCTGGTATGCCATTTGATGGGAAAGACGTACATATAGCCAGTCCAGTGGACCGTGTTCTTTCCGCAAATGAAGATGAAATGGAGCATAGAACTAATCACAAACCGAATAACTGTGAGGTTGACAATAATGATTGGGAGGTGAAGTGCAAGAAGCTTGACGTTTCAGATCATTCGATTGAAGCGATTCACACCAGTGAAGTTTCTTCAACGGTTTCCTCAGAAGTTATTGATTGTAGCAATTTGCTGTCCTTCCAACAGTCTGGAATGGACGAAGTCGGGGAGAATCTTGAAGAACTAAAAGCTGCAGCAGAAGAATTGTTTAATTCAGAATGGGAAGATGATGATTGTTGGTGGGAAGAAGAAAGTTGTTCTGGACAGAGCTCTTTCCCTTCTAGTGGTGAAACAGCATCAAGCAGTCCGACAGTTACAAGCCCAGGATTTACAAAGTGCTCGGATCTGTATTCTGTCACGGAGCTTAAGAACAAGCTGCAAGTAACTCCTGGACAGTCAAATATCCCGACTACGACTGTTCAACAGTTTGAACGGACTACGAGTAATACGGAGAATGAGATGGCTTCGTCTTTGGCAAATGAATATACTTTTAGACCAGAATCTACTCCAGtggtagaagaggaggaagaagatGAACCAGAGGCTGTCCCTGAAGTGATGAAGTTGAAGTTTTGTTTGAGTCTTTACACCGAACGTGTATATTTGTACGACAAGGACGACATGCCTCTTGGAATTAATTTCTGCATGTCTGATGCAAAGAACCGCAACATGGACGATTTACCCGCCATTCTTCATCATGAGGAGAATCTAAAGCAGGTTAAAAGATTTCTTGAAGTATGGAGGAGGATGGGAGAAGGAAAGAAGCGAATACTCCGCAAATCAGGCCTTGTGTTTGATGATCCTTTGGAAGCTTATGAGTGTGCAAGAAAGGGTATGACCAGGGCATCCAGCTATGTGCGATACCCTTCGAAGGAAAATCGAATTCAAAATGTCATAAATACTGCGGAAGAAATTGGAGGAAAGGTTCGAGTAATTAAGAAACCGAAAATTGTCGAaaacagaagaaagagaaaaactgaTCGTGCTAACAAGACAAACAGTGGTGAGGTGGCAGGAAGCCTGGGAACTGCTTGCACCACTCAAGAGCGCACCTCAAGAAACGCCCCCGAGGATAAGACCTGTTACCAGGCCGTGACGGCTGATGGGATGCCATTATGCCTCTTCTGTAAGGGCCCTGTGGAGTTTGTAGAGAAAGTGCAATGCTCGGATTGGGATGCTAGATTTTGCTCGTATGACTGCAAACAGGAATATCAGGTACGTGTCAGCGGTACAGCGGCAAGACGAGCATTGTTTGAAGCAGAACGAGGCATTTGCCAGCTGTGTTCAATGGACGCTCACAGTTTGTATCAGAACGTGGCCGCATTACACACCAGAGATCGTCCGGCATTCTTAGCACAGACTCCATATTCGTCATTGCCGCAGCAAATGTTGAAGAAAATAATCATGGATCCAAAAGAGGGAATGTTCTGGGAAGCGGACCACATTACACCCGTATCAGAGGGAGGTGGGGAGTGTGGATTAGATAACCTGAGGACCCTGTGCGTCCTGTGCCACAGGAAGGCTACTAACGAATTAAACAGAAGACTGAAACAACGAAGGGTTCTTGAGCACGCTGCTGTTTATGCT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E1BB03	DNA annealing helicase and endonuclease ZRANB3 OS=Bos taurus OX=9913 GN=ZRANB3 PE=3 SV=3
Q6NZP1	DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus OX=10090 GN=Zranb3 PE=1 SV=1
Q5FWF4	DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens OX=9606 GN=ZRANB3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001424 (this species only)
Ubiquitin family	UBD\|ZnF\|NZF · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01844 all species →	HNH	HNH endonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001876 all species →	Domain	Zinc finger, RanBP2-type	Interproscan
IPR003615 all species →	Domain	HNH nuclease	Interproscan
IPR036443 all species →	Homologous_superfamily	Zinc finger, RanBP2-type superfamily	Interproscan
IPR002711 all species →	Domain	HNH endonuclease	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45766 all species →	DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0004519 all species →	Molecular Function	endonuclease activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0031297 all species →	Biological Process	replication fork processing	Interproscan
GO:0048478 all species →	Biological Process	obsolete replication fork protection	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSIHXP00000025303.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.