Gene detail

Detailed information of ENSIHXP00000028715.1 in Madracis auretenra

Genomic Location: :...
NR annotation: XP_022793444.1, uncharacterized protein LOC111332386 isoform X1 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSIHXT00000031230

ATGGTTTCATTCTTCTGTGAACAGTTCAgaACAGACGGAGTTAGCCTTTCTGAGATCAGCGTTATGCTCAAGTCTGTTCTATCTGCCGCCGTCAGAATTATCCATGCCAGAGAAGGCCAGACCCCAGATGGCGATGATTGCGTGACTTTGACAGATGTAGACAGCGCTGTAGAAAACCTTGTCAGTGATGCGGTCAGCCAGTGCGACCAGAGTGCGAATGGAAAACTGACCAGGGCAGAGTTCGTAAGCTGGATGAGAAGACACCCTCTCATTGTGGACTCGGTATTCCAGCACTCCAGTATTAAGGACAAACAGTTTAACACAGGATTACAACATGACCGTGTTCAGGAGAGCCACAGGCCACCTGGGTTTGTGACAACCACACGACAAGGAACACAACACACAGAGCTGTTAAGCCAAACATGGGTGGATGGGCTGCGGCAGGGCGCTGATGAAGACCGGTCTCCTGAAGAGCCTGTGTTCAGCGGTAGTTATGCAGACGCCGAATACCTCTGGAGCCCAGTCTTCCCGGCCAGTCTCAGCATGCCTTGCGCGCGTAACAGGCACTCAGTGTGTGTATGGGGTGGCGGTGTGTTCGTGTATGGAGGGCGAGGAACCAGAGGGACACTCAAAGATTTCTGGAGATACGATTTAGCCACCAACACGTGGAACAATGTCCCCGTTGAGGGCGAGTTCAGACCACCGTGCTTGCAAGAACATACTGCGCTCACTTACAAGggCAATATGTATGTATTTGGGGGAGAATTCACCGCAACAAACGAGACGCCATTGTGGACATTTAACTTTCGTGCGCGGGAGTGGAGAAAACAAGCGGCGAAGTCGTGGGGCCCAGGTACGCGACGGTCACACACTGCCGTGATTCACGAGGGTTCGATGTTCGTGTTTGGTGGTTATATCGACATGAGAGGTGCAAGCGATGAGCTTTGGCAATACGAGCTTGACACTTCAAAATGGATCAGAATCAAATGGAAAGGAGATGGACCAAGCCCGCGTTACAGCCACTCAGCGGCTGTGGGAGCCGGTGGTATGTGGGTGTATGGGGGCTTGGAAGGTCTACAGTCCAGGAACGATTTGTGGAGATGGAGCTTTGtgaGTCACTCATGGTCGAGGATAAAGAGCCGAGGTGGTCCGCCGGCTTTGTTTGGTCATTCTGCGATTAAGGTTGGAGATGGCATGTTAATATTTGGAGGCGAAGCAACCGATGGCGCCTTACACAATACAATGTGGCGGTTTGATTTGGGGAACCGTACTTGGAGCACTGTTCGCCCACGGGGTGGCATATCCCCGCCCGTCCGCAGCTGTTTCTCTGTAGGAGCAGTTTCTTCGTCCGCTTTTCTTTCCATTCGACCGTCCACGGCTCACTCTGCCCCGCCCTGCACGCCTATGCCTTCAGGCTTCTTGGGAGACGAGAGGCTGGACAGTAGGCGGACCACCAGACCGGAGTCCTGGTGTGAATCCGTCACCCGGTGGGACAGGTCTGCAGCATCACTGGGTTCTCTTGTCTCGACGGCGCCGTTAGCTAGTTCTGAGGTAAAATCCCGCGACGATAAACGCAGCCAAAACCGACCAGCGTCCATGTTTAGCACAGAGGTGTACGAGAACTCAAGAGGGATGACTCTATCGGATGATTCTCTGCACCCAAAGCCGAGTTATAGCACCACACGAAATGATGATCAGCTCAAAGCACGCGCTCTCCCAGTCCAAGGTGTTATCTTGGCCAAAAAAGGCCGAGTGTATAGCCAGGAACTGTTGAATGTTAATCCGCCTCATGTTAGCGCggatttaaagaaaaatttggCTCATCCTGTTGCCTGTGTGTTGGTTCTTGGTGGCAGGACGCGTACACAGGCGGACTTAGGGAAAAGCCTCGACATATGGAGGTGTGATGTTGATCCAGTGAAGAAAAACCAAACAGAACGAGTGGAAAAGATCACTGTGACGGGTAGCCTTGCGACCACGCCCTCTGTTCCCTACTGTCAGCTGGAGCATGATGACGACATGGACACTGAGTCAGTAGGCAGCGACTTGGTCTTAGCAGACATGTCTGATAGCGATACCCGTAGTGTGGACTTCCTTTTGGATGACTTCCGCTTGGACGTGTCACATGGTGTCCCTAAAGTGTCTGTGTGA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13415	Kelch_3	Galactose oxidase, central domain	Repeat	Interproscan
PF13418	Kelch_4	Galactose oxidase, central domain	Repeat	Interproscan
PF01344	Kelch_1	Kelch motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR011043	Homologous_superfamily	Galactose oxidase/kelch, beta-propeller	Interproscan
IPR052637	Family	Cullin-RING ligase complex substrate-recognition protein	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR006652	Repeat	Kelch repeat type 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46461	KELCH DOMAIN-CONTAINING PROTEIN 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan