Gene detail

Detailed information of ENSIHXP00000028910.1 in Madracis auretenra

Genomic Location: :...
NR annotation: XP_027042133.1, ubiquitin carboxyl-terminal hydrolase 40-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSIHXT00000031445

ATGCTGTTCTACAGGAAGAAAAATCTTTTCGCATCTGTGGAAGATCCAGTGCTCTTGGTTCCTGCTCCCATtagagctgaaattgacaaacttAATGAAAACTTACTGAGGCAACGGGAAGACTATGATCGTCGTCTAAATCAAATATCTGTTAGTGTACATGTTGGCGACAACTATACAGTGATAGACAGTCTCCTGGTACTAAAACAGGGAGTGTCTGTTGAACCACTGATCATATCTTTGGACAGAAGAAACTCTGTAAATGATCTTCTACAAACTGCTCTCAAGCTTGACCCACTCAGAAACAATGTAGCATGTAAAACTCTTCATATTGCACGACAATTACCTTCAGGCCTCCATCTTTTCGAAGAGCTGACAGAGTATCCAGAAAAGTCCCTCATACAAAGTGGAGTGAATGGGGGTACAGAAGTATTTATATGGAATGGAAAAGAGGTTGATGGATACAAGCTTTATCCAGGAGAAGACACTGCACCAGTCCTGCTAAACATGACATATTCACTGTGTCAAGAGCAAGACGCTGTTGAGATTCAGAAACATTTTAGAAAGGATACTACAGTGGGAGAGATGAAGATAATGTTGTGCAATTCTGTTGGGATAAATTATCAAGATTTGCGTCTCAGCTGGGTGAAGTCAAAAGgTAAAACCAGTCAGATAATGCTGATAAATTCTGATCAGGATGGCAATACACTAAACGAAATAGGTCTTCAAGATGGCGATCAATTGGTGGTTGAGAAACGTGATGAAACACAATCCAGTGAACAGAGAGTGTCTAGTTTGCCTAGTTTAGCTTCTCAAGagaaggaaaaaaattccagtCTGATGTCCTTTGTGGTGGAGAATAGGTGTTTGgtaagAGAGTCTGAAGAACACAGCGATAGTACAAGTTGGCCGGTTTTTGCTGTTAAGATTCACAAAAATCAGACTGTTGGAGATCTCAAAGCCAAAGTTCTGGCAGATGCAGACTGCCATGACATTCCAGAAACTGTTTGTCGTTTACGGTCAGATGACGATTATCAAGGTCTCAGTCCTCCATTATATGAACATGAAACTGTGGAGGAGTGTTGGCTCAATCAAGGTCAGCGGATTGTTCTGGAGCGTGGAGCCCCTCTTCTTCAAGGAGAAATCATGATACGACATTACGTGTGCTCGCCCGTGCACACCAGCAGGAAAGAAATGGAACAAGCTGTGGTTAAAACCTGCACTGTTCGTGAATGCCTACAATTGTTGATGGAGACCTCCAACCTGCACGGAATGACCTGGCACTTGAGAAAAACCAACTGGATTGGTGAACCAACGGACGTTTTGGACAACGAGGACGAGACGCTGGAGAATGAAAAGATTAAAAATGGCGATACTCTTATTATTGAAGAAGGAAGGCTTCCCCCAAAGGGGTTTATTCGTGTTAAATTATGGCAAACAAACAGTGGAAAGGCGAATGGACAAAGTTCTGAAGGCGTTTTAGACTGGATTACATCTGGTGTACAAGgTCTTCTTGGTTCGTATGCAGTGCAGGCATCAGGGAATAAAGACAATTCAGAAGGCAGCGAGTTACTGGAACCTCTCGGCGATGTAGAAATATCCAAGGAAGCTTCGCTGTATGATCTAAAGCTGCAGATAAGTCTCTTGCCACAGCTGTCAGATCACGTGATCCCAACACCTGGATTTATCAGACTACAGGAAGTCGCCGacaatcacgtgacaagagttCTCAGAGGAATGAATCGAACTTTGAGGCAGCTAAAATTGACCTCATCTTCTCAGCTGTCTGTGTGTATTCTTCAACACGAGGAGGATTTAAGCCCTTCTGCATTGCTGCTGagattaaagaaaagaataccaGGAGAGAGAAGTTACTATGACGACCAAGAGGTGATATTTGAGCCCTCTGGTGGTGCCACGCCCGAGTCTTTACGTCACTTTGTGGGCAGAGTTTGTGATATACCTCTTGACAGACTTAATGTGGCCAAATATTTCAGAGCCAAGTATGAATGGTTGGTTATTAAAAACGCGCCTAAAACTCAGAGTAAAAACAAAGGcgggaaaaagaaaatcaatttAAGACAGTCTCCATTTCATCTTCAAGATGGGGACATCATTGGTGTCAAGGATTGTCAATCCGATGCAGAAAACAGAGATGATTTCAGTACAGCAGCAGATGACGAAggcaaagaaaaacttcaacgAGAAGAGGAGGAGAAAAAGCTGAGgagaaaagaaaaaagagcaAGACGACCCGAAGTTCCACTCTGTATTCATGTGGACGACTTTAGATAG

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q9NVE5	Ubiquitin carboxyl-terminal hydrolase 40 OS=Homo sapiens OX=9606 GN=USP40 PE=1 SV=3
Q8BWR4	Ubiquitin carboxyl-terminal hydrolase 40 OS=Mus musculus OX=10090 GN=Usp40 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14560	Ubiquitin_2	Ubiquitin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11869	USP40; ubiquitin carboxyl-terminal hydrolase 40	EC:3.4.19.12	Ubiquitin system	ko04121	deepkoala