Gene detail

Detailed information of ENSIHXP00000029057.1 in Madracis auretenra

Genomic Location: :...
NR annotation: XP_022799419.1, pre-mRNA 3' end processing protein WDR33-like isoform X2 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSIHXT00000031597

ATGTATCTTCCTATGTGTCTAGAAGTTTTGAGTCTAGAAGATTTGCCTACATGTATTACACAATACAAACTTCCATTTGATTTTTTCTTACCCTCCATTATTGATAAAGAGATCAAAGGCCTCTCTGAAGGAGCAGCTAACAGCAGTAAGAAGACAACTCAGAAAGGTACAGTTTTGTGTTGTTGTGGATACCTGGGACCCCCACCACCAGGGATGATTCGACCAGGAATGCATTCCCCTTTTCCACCGAGAGGGCCGGATCCCTTTATGCACGGCCCTAGACCTGGAATGGGGCTAGGCCCTGGAATGGGGCCAGATCATGGCCCTGGTCCCAGACCACGCTTTCCACCTGGCCCCAATGGACCACTTCCTGGTCACATGCCTGGACCACCAGATGGAGCATTCCCCCCACCAAGTATGGAAACTATGATTTGGCCACCGCAAGGAAAGAATATTCACATCAACCCACACTTCCGACCTCCACCGGGTGGAAGAGGAATGCCAGATGAGGGTGCTCTCCCACCAGGTCCTGGTGGAGATTTTGGACCTCGGGGACCTCCTCCAGTCAGAGGGCCACATATGGGTCCAGAACAAGGACCCAGGCCAGGTATGGGACATGAACCAGGGCCAAGACCCATGGGCCCAGGTGGTCCTGGCCCTATGCCAGGTCCTGGCCAGGGGCACCACCCAAGATCTGGTCCTGGTCATATCCCTGAGAATGAGATGAGGCCACCCCACGGAATGGGTCCTGGTGCAAATGCGATGTCACAACCTAGGGTAAGAAATTTTCTAACCAATAGCTTCAATgGACCTCCTCCAGGGACACCAAACATGGTTCCACCACATGGTCCCTTGCCAGGACGTGCCCCAGTACCAGGGGGCCCAGCTACAGTACCGCATGGCAGTGCAGCAGGAGGACCTAGCCCCTTACCAGGGCAGCAGCACCACCCAGCTATGCCGTCCAGGGCTCCTTCTCAAGGAATGCCTCCTGTAGGGCTGCCTCCTGGGGGCCCAGTACATCCAGCTGCCATGCAGTCGGGGATGCGACCACCAGTAATGAACCAACATCCAGACGTGGCAATGTCTGAACCTGAACGGATTGTCATTGGAAATCGAGTGACAGTGTCTAATATGGACGTTGCCAATCCCGCCATGCGCAGTAGAATGCCACCACCCGGTTACAGTGCAGCAGCAGCTATGGCTGCAGCTCAAGGAGCTGGATTAGCTGcggctgctgctgctgctgcagcTGCAAGGCAACAGCAGTTTCCCTACGGACAGCAGTATCCCTATGATTATGCTGCTATGTACGGAGCCGAGTGGCAGCAGTTGATGCAGCAGAGAGATGCCGCGTATGCTGCTGCAGCATATGGGCTGGATAAACACACCAAGGTGAGCCTTGATGAGaaatTTTGCTATTATTGTTTCTTCTCTGTTATCTGTGGCAGAGACCGACCAGACAGGAACAGAGAGAACTACAGGAACCGTGAGAGGAATGACAGGGAGAAACCCAGAGAACGAGAATCACATGATCAGAGGGAATCGCGAGACCCGCGTCATGACAGACCCCGGGAGAGAGAGCGAGAGAGGGACAGAGGGGATCGTGACAAGGCAAAAGAGAGGGAACGGGAACGACCAAGGGACAGAGAGAAACCAAAAGAAGCTCATAGGAGAAGTCGAAGCCGAGACCGATCATCTCACAGACGGGAAAGCAGAGAGTCAAGACATTCTGAGAATAGTTCTTCCAAGCGTATCGTTGTTGGACCATCCGAAAGCAAGAGTAAAACATCTAGTTCCACTCCTGACTCAAAAGCCAATCGTGTCGTGGTAACCAAGGCATCCAGCAGTGGCAAGCCTTCAAATCGTGTCGTGATTGGTTCATTACCTGAGGCGATAACACCAAGCCGACTGAAGGAACTTCTGCAGGGGATTGGTCCGATTCAGCAACTGAAAATGTCTACAACAAAACACAAGGCGCTGGTGACGTTTGAGAAGAATGAACATGCCTTGGCTTGCCGACGCAAATTTCACAGgactGTAGTCGATGATAGCCAAGTTACCGTCGACTTCCTCTGA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR039878	Family	RNA-binding protein 33	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22014	RNA-BINDING PROTEIN 33	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan