Genomic Location: not available for this species
NR annotation: CAH3106498.1, unnamed protein product [Pocillopora meandrina]
Species Madracis auretenra · all data for this species · gene families
| CDS |
| ENSIHXT00000033146 |
| Protein |
| ENSIHXP00000030531.1 |
| UniProt accession | Description |
|---|---|
| Q979Q3 | Transcription initiation factor IIB 1 OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) OX=273116 GN=tfbA PE=3 SV=1 |
| Q9HJM7 | Transcription initiation factor IIB 1 OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) OX=273075 GN=tfbA PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0010151 (this species only) |
ENSIHXP00000030531.1. This gene does have a gene model — the search simply returned no hit.| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036915 all species → | Homologous_superfamily | Cyclin-like superfamily | Interproscan |
| IPR000812 all species → | Family | Transcription factor TFIIB | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11618 all species → | TRANSCRIPTION INITIATION FACTOR IIB-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006352 all species → | Biological Process | DNA-templated transcription initiation | Interproscan |
| GO:0070897 all species → | Biological Process | transcription preinitiation complex assembly | Interproscan |
| GO:0097550 all species → | Cellular Component | transcription preinitiation complex | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K15196 | BRF1, GTF3B; transcription factor IIIB 90 kDa subunit | - | Transcription machinery | ko03021 | deepkoala |