Gene detail

Detailed information of ENSIHXP00000034848.1 in Madracis auretenra

Genomic Location: not available for this species
NR annotation: XP_022780666.1, twinkle protein, mitochondrial-like isoform X1 [Stylophora pistillata]
Species Madracis auretenra · all data for this species · gene families

Sequence

CDS

ENSIHXT00000037859

ttcaacacatattttttaaatatctCTTCGTTTCCTTTATGGTACGATCTGATTAAAAATGGGAAAAGTGCTTGGAATTCGTGCCGAAGTTGTTGCACGTGGTTGATGCATCAGCGACAGATCCAGTCACAACTGTTTACATCAAGCAGCAGAATATGTGTTGTTGGGAGCAAATCTGCTGCAAAAATCACAAAAAGAATGCACCAGACCTTACCTCGTGGTTTTGATGAACAGTTACCAAGCTCAAAACAGATCGAGCAATTCCTGTCAAGCCGTAAACTTATATTTGAACACGGTCACACATCGCTGATAGCAAGCTGTCCACTTTGTGCTAATAAAGAGGAGAGGTCTGATAATGCGAATGAacgtacactgtacattaataAGACTACTGGAAGTCATTTTTGCAAAAACTGTGGATCATCGGGAACCTGGAGTCAATTTAAGGTAAATAAAAGGCGTCCTTCAAATGACAATCATACTGACAGCAATGCTGATCGAGCCAGCCAAATATGGGAAGAGTCTACTCCACTGGTTCAGTGCAATGACAATGTCTGGGAAAAGTTAATTACTCAATTCTCAATAAAGGTGAGCTTCAAAGTTTTATACTTTCCAGAACCAAACGGGAAGTCAAAAAAATATGACTGTGTGCTGTTCCCATGGTATGATGTCAACAAGGAAACAGTGAAAGGCATTAAGCTTGTAAAttatttttattttgttatttggcTTTTCAGGCAGGGCTTTTTGGGACTATTTGGGTGGAATACAATAGCATCTGAAGCAAAAGAGGTTGTGTTGACGTCAACTGAGTTTGATGCTATTGCTGTGAGTCAGTCAAGTTCATATCCAGCCATTTCCCTTCCACTTGGAGCAAACTCCCTCCCTCTTGAGGTTCTTCCACAACTTGAACAATTTGAGAAAATTATTCTGTGGTTTGGAAATGACGTTTTCTCTCGGCATGCTGCAAATCAGTTTTCAAAGAAGTTAAACTCGAAGAGGTGTTTCCTTGTAAGGTGtgttgctactgctgctGGTTGTGATCTCACGTCATTAATTTCCAGTGCTCAACCAATTAGCCATGAAAAAATCACTACGTTCCATCAGTTGAGAAGTGAAGTGTTTGATCAGTTTGTTAATGCTGAACAAGTAGCCGGAGTGAAGtGGAAACGatttccaaaattaaacaaCATTCTAAAAGGTTTAAGGCGTGGAGAGGTGACAGTGTTTACTGGACCCACTGGAGCTGGAAAAACCACTTTACTGAGTGAAATGTCACTTGATCTCTCTATGCAGGGGGTGAACACGCTTTGGGGAAGTTTTGAGATTCGTAATGTGCGCCTTGTAAAAATGATGATGTGTCAGTATTCAGGaTTGAATCTAGAGAAACAAGTAGAGCAGTTTGATTACTGGGCAGACAAGTTTGAGATGCTTCCAATGTACTTCATGTGTTTTTACGGAGCTCAGAACATCAACACTGTTATCGAGACCATGAGTCATGCTGCTTATGTGTATGACATCGAACACGTCATCGTCGACAACCTACagtttatgacgtcatatctaaGCCGTGGGGACGACCGATTTTCTGCTCAGAATCATGTGATCGCTGCCCTGAGAAATTTTGCCAGCACCAAGAATGTACATGTCACTTTGGTCATTCACCCGAGAAAGGAGAATGATGATGTTGAACTCCAAACAGCGTCTATTTTCGGTACAGCGAAAGCAAGTCAAGAAGCAGACAATGTGATCATTCTTCAGAGCAAGAAAGGAGGAGCTGATAAATATCTTCAGGTTACGAAGAATCGGTTTGATGGTGTACTGGGTCGCGTTCCATTGGAGTTTGTCAGAGAATCTCTATCGATGTCAGGATTTGGCAAAACAGCCCAACCAAAGAACACATTCGACAAAAACAGGAGGCTTCCCGAAAAGCTTAAAGCAACTAGAGTGGCAGCAGACGTAAATATTGTAAAGTTTTCAGCGCCAAGAATTATTGGAGCGAAAAGAATAGTGCAACAAAATACAGTTTTACCAAAGACTTCTTCATCAAAAGTTACAAACAGTGGCATTCATGTAGCAGCATCGGATACAGTTACAAGAGATGCGAAGCACAGCAACGAGCTGGACGGTGAATCGAATCACGAAGATACAGTTCTGAAAAGCGACAACACATCTGATGTGATTTCggaggaaaaaaaagaaacggtACAAAAGGAAGTCAAGAAAATTTTAAGCGGCACCCGCCTGTTCACTAAAGCTGCGAATAGTCCCCGAAATAGTGTTAGTGCATACGCCCGGAGGCGAATTATAAGTCAACCAGGAAACTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96RR1	Twinkle mtDNA helicase OS=Homo sapiens OX=9606 GN=TWNK PE=1 SV=1
Q5ZIW1	Twinkle mtDNA helicase OS=Gallus gallus OX=9031 GN=TWNK PE=2 SV=1
Q8CIW5	Twinkle mtDNA helicase OS=Mus musculus OX=10090 GN=Twnk PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005193 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13481 all species →	AAA_25	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034154 all species →	Domain	Archaeal primase DnaG/twinkle-like, TOPRIM domain	Interproscan
IPR027032 all species →	Family	Twinkle-like protein	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR007694 all species →	Domain	DNA helicase, DnaB-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12873 all species →	T7-LIKE MITOCHONDRIAL DNA HELICASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003678 all species →	Molecular Function	DNA helicase activity	Interproscan
GO:0003697 all species →	Molecular Function	single-stranded DNA binding	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006264 all species →	Biological Process	mitochondrial DNA replication	Interproscan
GO:0043139 all species →	Molecular Function	5'-3' DNA helicase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSIHXP00000034848.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.