Gene detail

Detailed information of ENSJQFP00000001563.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000001620

GTAAACTGGTTCCCAAGCAAGATGGCGGCGCACAGCTGACCTGAGTCGCTCGTTTCACAAACAACAAAGGAATTTCGACGGTTTAAAAGACAGTATAATCCCATCAGGCCATGGATTTCAATCAGTTGATGAGTTTGGCTACTCAGAACAAAGCTCAAGCTCAAAAACAGAAAGAAGTGAAAAAAGTTGTCCCAAGGTCTGGTGGTAAAAGAACAAGTAGCGAGGGAGTGTCTGGAGCTGCAGTAGAGGCCTTCCTTGCAAAACGACAAAAAGAGCTCAAGCACAAAGCAGCTGAAGAGGAAGCAGCAAAACGAGCAAGGATCAAGGAAAGGCTGGCTCAGTCTCTTGGCACAAAGAACAAGCTTGTTGACAGGAAAGCGGCTACAAAAGGACAGAGTGGTCAGACAGCTGGGGAAAGATACAAATCTGATCAGATCAACCAGCAAATACCATGTAAGACTAGTGCCACAAACAGAGAAAGAACATCAACAATGGGTGAGAAAAATTCAGGGTCGAATAGCAGCAGTGTGAAGTCACTGCCACGACAGCGAAATGTGAAGAAACAGGAAGTAAATGGGCTGAAAAAACCACTGGGGTTCAACTCCAACAAAGTCAAGACCGTGCAAAAAATGAAAGAAGGTGCAAAGAAAAGTGGACCAATGAACTTCAAAGACCTGCTTGCTGCAGCAGAGAAAAATAAGAATGGGGAATCAACCAGTAATGAAAGGGAATTAAAAGTGAAATCTGGATTGGCAAAGGTTACTAAGAATGTAGAACATGGGAATAGAACTGTCAGGAAACAGGATACaatacaagaaagaaacaatttgCAAAGGACACAAAAGGAAAGTCAAGTCACCAATGACAGAAACAGGAAGAGCTTAAaggatggaaacacaaatgggAAAGATTCTCAGAGGTCCTTGCAATTGAAAGGTGGTGGTAAAGTGAGAGGAATGCAACCTATGACATCTGCTGCAGACATTAGCTCAAAGGGGGTTGGGAGGACTAGTAAACCTGCAGACAGTCATCCAGGTAACCAAAGGAGACCAGTGTCTTCCAAAGAAAGACATTTCGGCAGACAAAGAGATCAAGAAATGTTAAAACGAAAAAGGGACCCTTATGAGGAAGAGATGGATGATTTTATTGACGATGGAGCGGAAGATAATGTTGATGTCTCTAGGTACATCAAAGAAATATTTGGTTATGACAAGTCCAGatatgttgatgatgatgctgatttGTCAAACATGGAGAGTAATTATTCACAAATTGAAAAGGAAGAGTATAAAAGtgcTAGGATTGCACGCCTTGAGGATGAAATTGAACATTTAAAAGAGCTGGCAGaattgaagaaacaaaaacagaagaTGAAAAAACGACTAAAGACATAAGGTGCTTATGAAGCAATCAACTCATCACAGACTATTAGTAGTGTTAAAAATGGTATAAAATCAAGTTCATAATAATAAATCTGGAAGAAATAGTCACTTTATATTTATAGATATTTATTGTATCAGCTTTTCAGAAGTTGAAAACCATCCATTTGTACTGTTTATTACAATACTAAGTTGGATGGAGTTAATCAAAGTGACCCTTTTAAATGAGCCAAACTGGGCAAGTTGCCATGTTGTTTACTTATAACTGAGCATGGTTGGGAATTTTGAAATCAGAAGTGACACTACAGGGCTGTGCATAGTTGGGGGTGTGAGTTGGGGGGAGGGAGGGTGGTGGCAATTGCCCccatcaggaaaactaaatgttttttgtaACTGTCAGTATTTGAGTCAggaaaagtaatttttttttcgaacatagtatttgagtttgctgggctattgctttctgtatatgggagacccctgtgaaggtgtgcaaagtttgCCCCGAATACAAACAATCCTAGGTACAGCCCCACGCTAAACCAGAAAACATGCAACctgtttgtctttttgtttgtttttaaaattaatggaAAGATCATTGTAATTTCAATGTACAAACACAGGTGTACAAAATGACTGGCTTCCCTTGTTTAAAACCCAGTTAGCACTGACCTAGGGCtatctgacgatgggctaacgctcgaaacgtcggtctttgaattttttacggtggctaatttaccggattcactctgacgaagggctaacgctcaaaatgtcggtcttccaatTTTTTtaggtgcctaatttaccttatcaaccctgtggttgataatctattttagtgtttcactttcccaccgacgcagcacacagtttctttcggaactaaatcccctatacagGAGTTAACAGGGTCTCAATGGGAGTGTTGGGGGGCGGTCTCTTTGATGATTGACATTGAAAAAATAAGCAGTTTTGACGACTGACAGTTGAATTTTAGGTCAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08243 all species →	SPT2	SPT2 chromatin protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013256 all species →	Family	Chromatin SPT2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22691 all species →	YEAST SPT2-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0006334 all species →	Biological Process	nucleosome assembly	Interproscan
GO:0006360 all species →	Biological Process	transcription by RNA polymerase I	Interproscan
GO:0042393 all species →	Molecular Function	histone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15193	SPTY2D1, SPT2; protein SPT2	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.