Gene detail

Detailed information of ENSJQFP00000002767.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000002848

cctgccccCTTCGAAACTGCATCTCTGCACTGTGGATATTTATTATGAAGCAAACACGAAATATCCTTTTCCTGGGACTGGCGAGGGATGCGATGTGGACAGCTGAAAATTTGTAGCGTTTCTTTAAACCGGAAGTTTCTTATTTTGTCTGGGTATTTAGGGTGGGGCTCCCTACGGAGACCCCATTAGGACCGGTGAGTCCTGGGAAGGGAAGACGCCACCATATTGGAAGTTGTGCGAACCGCGACGCGATCTGCCGGTCGAGGGAATATTTGTGGCATAAGAAATATATACTCAATATGGAGgTGAAGATACTGGATTCCAAGAGTTTAAAAGTCCTTTGCGCACTCCAAAATCTTTCTCCTTCCTGTACCATCGCTGACTTGAAAGAAGATTTCCACAAGAAGTTTTCCAAGACATACCCAGAGAGACAGTCATTTCGTCTTGAACCACGGGGAAAGGCAGTGAAAGATGAAGATAGTTTGCAATCATTAAAACTAACTGATGGATGCAAATTGTACTTCAAAGATTTGGGTCCTCAGATAGGATGGACAACGGTTTTCTTGGCGGAGTATTTTGGCCCTCTTATTGTTTATGTGCTGCTCTACATCCGTCCCGAAATCATTTACGGACCTGGGGCTGCAGCCAAGCCTCATGCTTTTGTAGTGCACCTTGCAGCTGCTTGCTGGGTGGGACATTATGGGAAAAGATTGCTAGAAACCATTTTTATTCACCGCTTTTCAAAGGGCACTATGCCACTCTTCAGTCTGTTCAAgAACTGTGGCTATTATTGgGGATTTGGTGCCTTTATTGGATATTTTGTGAATCATCCTTTGTACACACCACCATTGTATGGAGATATACAGATGTATGCTGGTTTGGCTGCATTCTTGTTTAATGAATATGGGAACTTCGTGATCCACTGTGCCTTACGGGATTTGCGGCCGGCTGGTTCAAAGGAGAGAAAGATTCCATATCCGACCTCCAACCCCATGACGCAGATGTTCAGATTCGTATCTTGCCCCAACTATACTTACGAGGTCGGTGCCTGGGTGTCGTTTGCTGTGATGACTCAAACGTTGTCAGTTGTCTTCTTTTCTCTGACTGGATTCTACCAAATGGCAGTGTGGGCCAACGGCAAACACCGTAACTACCGTAAAGAGTTTAAGGAGTATCCCAGGGGTCGGAGAGCAATTCTGCCGTTTCTGCTCTGAACGACATACTTATCGAAGCATACAGTTGTCAAAATACGAAGGGAATTTATCCGGTTTGTCATTGCCTTAGGTTTTATGAACTTTGAGATTTATCACGCAAATATTAAtccctgaaaaaagaaaacgactaCGATTGACATTTATTGGgtattgaaaatattgaaaactaAAAATTTATGTCCAAAGAAAAAGTAGAGCAGATTGGTAGGTAACTTTGATCTTCGATAAAGGCTCTAGTTTTCTATTAtaatctttttctttcttctctagATTTAAGTTTTTACATTTTGTAACGTCTGTTGTCAGAAACTCCTCTTAGGCtttttactttatttctttttttgtgagATTTTATATACCTTAttgaaataaaaggaaaaaaaaaagacgtggTGCGTTTCATCAGTTTGTGTCTGATTTGGAAAAAGAATCGCAGTATTATTTTGCCGGCAGTGAATGGAacgtgaacattcattggaatgctatGAAGTATATGCCACATGGAGGTGCTTTTGGCGGCGGGACGTTGAATGGATAATTCCGAATTTATTTGGTACATATCGTTTTGTGTTAAAAAGGTATTTAATATAAGTGGATAAGAATGAGATGTTGAAACGTTCTCAGCTTTCAATAACACCACTGCTGAGAAAGTAATAAATTGCAGGAcaaattacaacttcagtcATCACTTTGATTCATCGTGCTTAAAAGATGGGAAAATTATTGCAGGATGCAAAGAATACGGTCATGTTACAAACCTGGTGATACATTTTTGGCataattaaaaagaaatatGACAAGGTAAACAAACAGTAATTATCTTGATTGAACGCTAATCCATCTCTCAGAGTATCTTTTGAAATTAAcctgaaaagcaaagaaaagaacGGTGTCTGAATGGTTTAGGAAAAATCCAAATGAAATTTAGAGCTGGTACAACAGCCGAGAAGAAAAAACTTGCCCTTTCGACATAATCAGAAAAGAGGTTTTGCGATTGGA

Protein

Gene family

Family type	Membership / link
Ubiquitin family	ULD\|UFD/UBQ\|UBQ_Other · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02544 all species →	Steroid_dh	3-oxo-5-alpha-steroid 4-dehydrogenase	Family	Interproscan
PF21696 all species →	TECR_N	TECR, ubiquitin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001104 all species →	Domain	3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal	Interproscan
IPR039357 all species →	Family	3-oxo-5-alpha-steroid 4-dehydrogenase/very-long-chain enoyl-CoA reductase	Interproscan
IPR049127 all species →	Domain	TECR-like, N-terminal domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR000626 all species →	Domain	Ubiquitin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10556 all species →	3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0016627 all species →	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0042761 all species →	Biological Process	very long-chain fatty acid biosynthetic process	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10258	TER, TSC13, CER10; very-long-chain enoyl-CoA reductase	EC:1.3.1.93	Lipid biosynthesis proteins	ko01004	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.