Gene detail

Detailed information of ENSJQFP00000004408.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation ROSCU · all data for this species · gene families

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04034 all species →	Ribo_biogen_C	Ribosome biogenesis protein, C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022968 all species →	Family	16S/18S rRNA aminocarboxypropyltransferase Tsr3	Interproscan
IPR007177 all species →	Domain	16S/18S rRNA aminocarboxypropyltransferase Tsr3, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20426 all species →	RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan
GO:0016740 all species →	Molecular Function	transferase activity	Interproscan
GO:0030490 all species →	Biological Process	maturation of SSU-rRNA	Interproscan
GO:0106388 all species →	Molecular Function	18S rRNA aminocarboxypropyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000004408.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.