Gene detail

Detailed information of ENSJQFP00000005691.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000005882

CATTCGTTGTTTGCGCACGAGCGGGAAATTCGTTTTCGATTTGGCGCAATGGCGGGCGGGCGAACGAAAGATCACAGGAAAACTTCAGCGAAAACCAAACGAAATTCATCAGAGCAATGTCACAAAGATACTGTGAGGTTAAGCAGTTCACAACTAACCTGGCCTTTTTCTGATTCGAAAACAAATGCGGTATACAGAGAGCTAGACGTTGCAGAGCTCCATTGGCCTGCCGAAGATGAGAGAGAATTGAGCCAAGAAATTGTCCGAGTTAATCCACTAAATCGACATTCCATTCTACAGGTGCCAAGTCACAAATATGTTTTGAGCCACTGGGGCAGAACATCTTCGTTGGTTGCAAGTGACATTGTAGCAAACAACGGCACCAGAAAAGGTTCATCTATTAAAAGTGGCTGTTTGGAATGTACGGTGAATGACACAGATTCAAAAAATTATTGGATGTCTTTATCTGATGAGATAATTCTTGGAATATTTAAGCTTTTACCAAAGAAATCAATTGTTAAGTGTGCACAAGTCTGCAAACACTGGCAAAGGCTGGCatACGATGAAAGCCTTTGGCGTTGTGTTGACATGACACGGGTCAAGAATCTTCCATCAGGGGTGTTAGAGAAAGTGATTAAACGGGGTACAAGAGTTTTACGCCTGGCTCTAGCAGAGgttgACTCTACTGTTTGCGATAACAACGCTTCATTTTTCTCTGATGTTGTTCCTCTTTCACCACAGTCACCAAGTGAATCAATGTTCAGTCTGAGATATCTAGATGCTTCTTCATGTTGCTTTCAAGGCGACACTCttctttgcattcttttgCATTCAAAACAGCTGACTCACATCAGTTTGGagtcctgcaccatttctaCAAGTGTGTTACGTGCTATGAGCGACTTTCGCCACCTGGAAGTTCTGAATCTGGCTATGTGCCATGGTTTGACTGCAAATGGCGTATGTTCCTTAGCAAAGAGTTGCTCAAGACTCAAACAGTTAAATCTGGCATGGACAAACCTCAGCAAAGCAACAATTTTACATGTCATAAAGCACTTAACAGGATTGCAGCAGCTAAACATAAGTGGACAAAGAACAACAGTCAATGATGAGTCAATCCAAATGCTTGTAAGATCCTGTCCCTCTTTGACTAATTTGGATCTAAGTGACTGTGTCTTGATAACTGCAAGATCATTACATGAAATTTGCAAGCTTGAGAATCTCGTTCACTTGAATCTTAGCAGGTGTTACAATGTTGCACCAGTGGCATTCAGCCACTTCACCGAGATGAAATCATTAAAGCAACTATGCATCTTTGGACTTCTCAATGTAGAAGGACTTGAAGTGTTGAAGAAAGAGCTGCCCGACATTGTTGTTAACAACTCACTGTTTTCATCTATTGCCAGGGGTGACACTTGGTACACAGTTCTTACAAAATTTTCAAGATGCTGCTTCTTGCCAAGAAAACAACAGTGCTGCAAGATATGGAAGGCCATGCAGTTAACTTGGCTGTTGCTTTACTTACAGACCACTGAAAAGCAAGCTGTTAGGATCTGTCTGATGGTTGGCGGCAAAGTAGTAATAGTTGAAGAATctcatcttgaaaacagtgtaGTAAACACAAACACACATGTATGAAATTGTCACACACGAAATGACCTGAAACACAAGATGACACAAAAACAAGATGTTTTCAGGGAACATGTCACCTCTTTGAATTCTTGTTAAATTTGACTATGCAATCCTAGCCAATAGGCATTAAGATGGTAAATCTTGGGCTTAAGGGGCTGAGACAAAAGAAATATCATGCAAAGGTAACTGTCATGATGTAATTATACCAGCTGATGGAAACCTTAAATTATTTCTCACAATACTTTATAGACAAACTGGTGCATTCTGAAAAATTGCTGTGGTATCAGCAAGGGTGTGCTTTTTCAAAAGTAATAAACTCAATAAATTAAACATGGCTACAACAGGCTTTCTGTAAGAACAAGGGTTATTGACTGTCAAGTCTCAAAAACAAATTCTTTGAACATGAAATATCTTGCTTTCTTTTCCTGCCATCATATCTATGAGCTAGTAATGGTCATTATGGGTCTTGGTCCTTTTCTTTTGCTTTGAACACCTCAATTATAGAATGATATTCCTCTTGAACTTAAATGTTTTCATAATCTtaatttattgaaaagaaaactacaAACGTATTTAAATTTAAGAAAGCAtttttgttaaattaaattGATTAGTGTATACATACAAACGTATATACATATTTCTAATTGTATAGTAGTTATTTTACAGTATTTGTAATATTTAGTGGAAAGCATCATTGGGCAGCAATGGAAGTGGTGCTATGTAAAATTAAtaaactgttattattattacatgtagTTGATAAATCATTTG

Protein

Gene family

Family type	Membership / link
Ubiquitin family	E3\|E3 adaptor Cullin RING\|F-box · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12937 all species →	F-box-like	F-box-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001810 all species →	Domain	F-box domain	Interproscan
IPR036047 all species →	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR006553 all species →	Repeat	Leucine-rich repeat, cysteine-containing subtype	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR38926 all species →	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03875	SKP2, FBXL1; F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.