Gene detail

Detailed information of ENSJQFP00000005925.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000006148

aattttagctctttgtcagagtgaaacctgtttGTTGACTAATCCTACAGATGTTTTACTTTGCCACGATGATGAGTTAGAAGGGAGAAGAATTGCATATATATTTTACCTCGTTCCACCTTGGGAGTCGGGAGATGGAGGTTTCGGAAGTTCTGTCGACCAGCAAAGTACGGCTTTCTGTTAGTGGGTGGTTTCATGGGAACAACGCAGACCGACCCTTACCGTATCAGGAACCACACCGACCGCTGTTAGGTCCAATTGCTTTGGAGGATGAAGTTTTGGTAACGTGGATCAACCCAATGTACCTTGACGCAGGAGTAGTGAAAGACGTCAGAGCCAGATTCAAAAACGAGTCTGAGATAGAACTACAAGAGTTCCTTCTGGAAGATAAGTATAAAGAAGTGATAGAGGGCTTGTGTAGTAAAGAAGTGATATGGAAATGGAAAGGGCCTGCTAATAAAAGGCACTACGAGCAAGTTGATATGGAGTCCGCACCCGCGGTAATAAAGCAGCTGACGACACTACTCAAGTCAGAGCCCATGTTCAAATTCCTCAGGTCAATGACGGGCCTAGAAATGGCGGACCTGCCTCTcagtgatgacgatgatgacgacgatgatgaaaaTAATGGGGATTTTGCGATAGAAACAAGCTCGAAGTCGCAACAGGATCCATGTTGCCATGGTGAAATTCGACGTTGGAGTCATGGCTGTTACACGCTAGTTCATGATACTGAACCCCTTGGCGCAGAATTTGCGTTAGACGTATTGCTGTATATTGGAGGGAAAGGTTGGAAAGAAGGTTATGGAGGGTGCACGACGTATCTCACCAGTGGAGAAGACGAGGAGcTTCTAACAATTCATCCCCAAGAAAACGCCTTGGCGCTGGTTTACAGAGACAAAGAGACAGTAAGATTTGTGAAACACGTTAACCACTCACTAATGACAGACGAGGAAGCTGTatacaataacaacaactttttggatttttcttttgtgtacTTTGAGTAACACTGCAAtctcttaatcctttcactcctgacagtggcaagttcaaaactgataacctttccaaaattacaaattgggtaaaatgaaaaaaaaaaccaaacaaaccacagttaagtactgcttcaCAACATTCAATAATGGTCaaacttgagggttctgtccacagaatcaaaactttgaaaatgaccaaagagttaaagggttaaatcatgtATTTGTACATTGAACAAAATGAGCACTAGTTTCAAACGTGTTAAGGATGTTTAACATAGGAGCCGGAGCTGTTTCCTTTATGGTTTTACCGTCGTTCCGTCGGTAAATAAAAGCCTGTTGTTCTGACCAACTACAGAATCGGAGCGACTTTACTGAAGGAACCCCAATGGCGAGAATTTGAAGCAAAacttatgaaataaaaattaactGTGATAGATGTAGTAATGGCTGCGCAGCGAGCGTTGCGAGCGAGCAGCCACATgatcaggatttaagagagatatataagatgggacgaattctcgaattcatcactttttaccatAATGCATTGCGTTTAACCACACTTTTCATCAAAGCTATTTGCGGCATTTTTGACCAGAAtgcaaactgcgaattaataattattggttttattgacgagGACTAGTagttgaaaatctttttgaccagTTCTTCACACTAATTTTCGCAATttttgtaaccatttttttttattaaaatacgttgtttttcttggtattagtgacacccaaagactgctttctggtGTAGTGTTCATCAGTAATTccaaaaagagtgattttacttgacctgtgaaacagagaataacaactagtgcaaaatagcttcgagtaaacacaaaaccagtggaattaagtagcgcgaatgttctactacctatttTACAAGTAAtgtaaaatcactctaaagaATCAATATTTGGCGTAGCCTTTGctaaaccaaagcatgcctttacatattatcatagcactaaagatgcaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10637 all species →	Ofd1_CTDD	Oxoglutarate and iron-dependent oxygenase degradation C-term	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051842 all species →	Family	Ribosomal subunit uS12 prolyl hydroxylase	Interproscan
IPR019601 all species →	Domain	Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12117 all species →	HISTONE ACETYLTRANSFERASE COMPLEX	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006449 all species →	Biological Process	regulation of translational termination	Interproscan
GO:0019511 all species →	Biological Process	peptidyl-proline hydroxylation	Interproscan
GO:0031543 all species →	Molecular Function	peptidyl-proline dioxygenase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016706 all species →	Molecular Function	2-oxoglutarate-dependent dioxygenase activity	Interproscan
GO:0031418 all species →	Molecular Function	L-ascorbic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000005925.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.