Gene detail

Detailed information of ENSJQFP00000007524.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation ROSCU · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000007871

ACGTGACCCGGCTTCCGTTCGCGTAAGCTTCGGAGTTCATCTTGGAAAGTGGGAAAATTTTGTTAATTTTCCCCCATTTCTTTTCAATGCGGTCAGGCCTCTCGGTCGACCAGAGGCTAAGCAAACTTTTTTCGGTGTACTAACGGGCTCAGAAGCCTTGGAGCTGGTCTTAATGGCCTCGGAGGCGAGGACTTCGATTATGGCCCACAAAGTGGATGGGAAGAAAGAAGAAGCGATGGAAACTGACAAGCTTACACCACACGTGTCCAAAATAGACAGTGATAGTGATGGGGAGTTTCACGAACCAGGAATGCGGGTCGGCCAAGAATACCAAGCAACCATTCCTGATCTTGTTTCAGACAACAAAGAAGAGGCGAAGAATGACCCTGCCCTGCGTCACAATGCCCTTTTGGTATGGGCACCTGTGGATGACATTTCAAACCGAAAATTGGATGACTATGTTTCGATCGCAAAAGACAAGCACGGCTACAATGTTGAGCAGGCTCTGGGAATGCTTTTTTGGCATAAACACAACCTTGATAAGTCTCTGAGTGATTTGGCCAATTTCACTCCATTTCCAGATGAGTGGAGCATGGAAGATAAAATTCTTTTTGAACAAGCGTACAGTTCACATGGGAAGAGTTTTAAAAGGATACAACAGCAGCTTCCAGATAAGTCAGTCGCCACCTTGGTTAAGTATTACTACTCGTGGAAGAAGACCAGGAGTCGAACCAGTTTGATTGACCGACAGGCCAAATCTAAACGAGAGAAGGAACCTGCGAATTCTGGTGGGGGAACCCAGCAGCCAGTTAATAAAAGTGATCCAGAGAGCGAGAACAGTGATTCCAGCGATAGTGACTTTGAGCCTGAAAAAGAGACTCGGCAGACCAATGGTCAGGCCAAGCCGAAGCTTATCAATAAACAGGGAGTAACCCCAAGTGTTACTGGTCCATGTGTTAATTGTGGGACTCAAACATCACAGCTCCATGGAACACAGAAAGGCAGCATGTGCAGTGCTTGTTATCAGTTCTTAAGACGAACGGGGACTCTGCGTCCAAGACATGAAGGCAGGGAAACGAGAGCTGGGCATCGAGGAAATAAAGTCAAAAGGAAGGCTCCAAAGGGGATGATATTGTCTCAGGATTACCTGATCTCCGTTTCTGGTACCCATGGTGATAGTCATGTGCGACCGCTGGAGGTGGAAATAGTGAATCTGAAGCGGCAGATTCAAGTCAACAAGCAGTCGATTAGCCAGCACAAGTACCAGTTGGATGGCGGAGTAGAGGTGTTCAGACCACCGGATcaaaacaacaagaatAATGCCCGGTGGTCGAATGAAGAGTTACTCCTTGCAGTCCAGTCTGTAAGGCGCTATGGTAAAGACTTCCAAGCCATGGCTGAGGTCCTGGGAAACAAGAGCGTCAGTCAGTGCCGAAACTTCTTCGTGAACTACAGGCGACGCTTCAACCTGCAGCTAGTGCTGGAGGAGTACGAAGCCGAGCAGGGAATCACCAGCAGTGACAGAAAGGACGATGATTTGCAGGTCTTGCACATGTCTGGTTCGCCAGGGAGCAGTGGCAACTCGTCTCCCAGTCAGCCTGATAGGTCGTCCCCATCCATCCCTTCCCAGGGCCTTCACAGTCAGCCACCGCCGCTACTTAAGCCCTCGGGATCGCAGACCCAGCGTCTTCCACCTCCCTTGCAGTCCCAAGGGGGAGTACCACGTTCAACTCAAGGTGGCTTGCAAGGACCTCCCCCACTGATCAAACCCATGGTCCGACCTATTCAACCACAGCCGCTCCGTCCTCAAGCCAACCCAATGATTCGCCAATCCCCACCGCCACCCCCACACCTAATTCACCAGCAAATGTTGGAGCAAAAACCTCTGGTTGGCTCCGTTGGGAGGTCCGAGTCGCCTCACAGCGCTTCTGGGACCCCTCCCTTGAGGCAGACTCGGTCTGGAATTTAGCAACGCGCTTTCGCGCTTTATACGCCCAAAGAAGAATTTACGAAGATGGAAAAGATGACTTCCGTGAGCGTTCCTGCAAGCAGTATGCTCTTTTGAGAAACGTTTCTCCGAGTTGTGAAATTTCTGTTGATAGAAAATGGTTTTTCTGCTTAGCATTCAGTATTTAACGTTCTTGCGTTGCGAGATCACATTTGTATCCTTATCTGGTCTCACTGGAGTGAATACAGCAATAACATGAGTTTTAAAGGGCATGGTGTTAATTTGTGGTCCGCGTAGTGCCATCTGTCAAACATCGTGTAATTATCTCTCCCATCAATGCGCGAGGCCCTATAGTGCCACAGACAACTTAAGCATCCGAACATAACGCTCTTTTGTAATGGCGTCTCAACGTAATCCGATTGGCTGACAGCAATCGCATGATGCATTGTAAGCCAATGATGAGCAagacggtaaaaatattgcagCCCCCATAGGTCTGCGGTAGCTTTCTCTGGGGCAGCGTCAGTTTGGCCGCGTTTGTTTGCCAATGATCGTAACAATGCCGGCGGCCTTCTACGTAAGTGTCTTCCGAGTTTCCCCTTCCCTGTGCCGTTGTCTGTTGATCCAACTTAGTCACATATCAGGTGTGTTTTGAGGCTGTATACAAGATCTGGAGTGCTCTTGGTGTTTTGGAATTCAACTTGGCAACCAGGCTTACATGCAAGCAAAAAGAAATGAAGTAACATTCTCGTTCAGTTTCTCGCGTTTGTGTCTGCGAGAAAGAACAGAAACAAACCTTAAATCAGTTAATTCGTTTCTTCTTTCGACGAGTTAAATTGATTTAGTTCAGACGTTCACTTCCTTCCTCTTTTACAACAACTATTGTATATAACAGTCTACAGTTGGCGTCTTGTTAGGTTTCTGGCGAACATCTTTGATTTGGTTTGCGTAATTCATTCATCTGTTATCATGGATCCTGTCGTGTTCATCCATCTGAAAGTTATAGCTTCGGAATGTAAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00249 all species →	Myb_DNA-binding	Myb-like DNA-binding domain	Domain	Interproscan
PF01448 all species →	ELM2	ELM2 domain	Family	Interproscan
PF20878 all species →	REST_helical	Helical region in REST corepressor	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001005 all species →	Domain	SANT/Myb domain	Interproscan
IPR000949 all species →	Domain	ELM2 domain	Interproscan
IPR017884 all species →	Domain	SANT domain	Interproscan
IPR051066 all species →	Family	Transcriptional Regulator and Corepressor	Interproscan
IPR049048 all species →	Domain	REST corepressor, helical domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16089 all species →	REST COREPRESSOR COREST PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000118 all species →	Cellular Component	histone deacetylase complex	Interproscan
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0005667 all species →	Cellular Component	transcription regulator complex	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26242	RCOR2_3; REST corepressor 2/3	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.