Gene detail

Detailed information of ENSJQFP00000007966.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000008315

GCCAGAACCCAAGCTCCTGCCAGAGAAAACCAATGCAGTGTCAACTGGGCGTGCAATGGAAGCGTTTCATTTTGTCAGTTATGTGCCAATCAATGACCGATTGTTTGAACTTGATGGACTGAAGCCTTACCCAATTGATCATGGATGGCCTGTGGGTAAAATCTTGCCTATCCTAACCTCAGAGAAACTCTTATTCTGAAAAAGCTGAAACCTGTTAAATAAATAGGCAGTGTATGTAAAGATGGGCGTACAGTTGACGTGAACCCTACCATGACATAAGGTATAACCTGATGGCAGTTGTGGCTGATGGAACGACCAAGTGCAAAGAAAAGCTTCAAACTTTAGCTGCAGAAAGagaaaAGATACTGGAATCGTTAAGAAAGCTTGACCCAGCATCATCTTCAGCATCAGCATCAATAGTAACAGATTCTATTACTTCCAACTCAATCACTAACACTTCACAAGACAAAAGTGAATGTGCCCTTGATGGCAGTGgtgagaacgcttcgcccacgtTATCCATGAATATGGCCGTTGGTGCCTCAATAGTTGCCGGAGAAGCTAAGACAAGCAAAGCACCCAATGACTCCAGATTATCAAGAACCAGTTCTGTAACAGAACGGAATTCGCAGGCCCAGTCAACGTGGCCTATGTCGCCTGAAAGGATCAGTGAGGAAATTCAGCATAACCTGCAGGCAGAGGACGCTAGGGTGGCACCAATAATTTCATCCGATCGAACAATAAGCAATGAGAGGAGTCTTGAGCAAGAGTTGGTTAAAACGTATGAAGCAAGTGGGTGTCCTGTGTCGCCGGCATGTAGTGTCAACTCCGAATCTGGTGTGTCGGAGACTGGGGAGACCACAGAAACTGCACCATCAGAAGACCAAGCAGATTAcgttgaaacattttcattctcTGATACAGAGACAGTTGGAAGTAGTCACGAAGAAAGAGGCAGCGGCTCCCCAAGTGATGTAGATTCAGCACAGGATCTTCAAGGAGCGTCAAAGCCCGTTCATGTGGAAGCAAGTCAAAGTTACGGCCTGTCCATTCCACTTAGTGAGATAGCAAAGATTTCTTCACATTCAGAGagtCTCGTTTGTCATTTGCATCAACTGGAACGTCAAATTCAAGTTTGTGAAAATTCTTTGCGAGATGAGAAAGAGAAGCGAAGAAAGTACTACGTTGATCACAGCAGGAGAACGCATGATTACGATCCCTTCATTCGGACGTTTCTGACGATGTTAGCAGAACAAGGGCATCTTGCGCAGTTGGTGGAACAACAAACGTCGCTTAAACGGCGACTAACTCAGAGTAAACCGCACTTTAAACAACTTAAACGGGTGTACAAGCGCAAGAAGGCAAGATAAACATGACCTCGACGACGTTTTAATAAGTTGGTAACCGTGCTTTGTGTAGCATCGTTTAGATGGCTGGAATTTACTGAAACCAATTGTTGTCATGACTGGCAGGTGAACTAATCCAGTCAGAAGGAAGGCATATGGATATTTCAAAAGGACGGAATTAGTTTACTAGATTATTACAATCACATTTCTAGGTAATTAGAGTATTTATTTGCAATCATTATTTTGTAAGAAATTCAGCAGTAAAGTAGGCCTTAACTTAAATGTTGTGTGACCAATTTTTCATTTAGCAGGAATCCCTAATGAATCCAAATGAACAAGAATGAAAATGAACCCCATTACTTATTCCATCAGCACAAATTGACTGTTATCAACCTGAAGCCAGGCAAGAGGAAGAGGAATGGTTGTTTCATACAGATCCCGAGGGAAATGTGTCATTTctacaagcaaaacaaaaaaccaTGAAAAATGGTGGGATTTCCAACGGAGTCAAGTTGTTTGGTAGCTTGATGCTAGTATACCTGTCCCGTACCGTCGTCCAAGTGAAACATTTATGTCAACTTAGCGACTAGTGTTCCGATCCAAACTAATAGATCTATTTTTTAGTTCACTACCATGAAAGTTGCATTTGTTTGAGTTCATTGGGCCTAATCCTAGGGAAACACTTTAACAAAATTAACTTTTACtgaacaattattccacgaaaGCGAGGTGAATGCCAGAAAATTGCTAGACTATGTGAAGGAAACATTGAGTCTGAGCCTAAGGCGAATGAGACAGCACAGTGTCATAATTTAACAACAGATACTATGGGTGTCAACAGTCAAAACAACACTGAAGTTTCGGCGCATATTCACTCACAGAATAATTGGGTTATTGCCAGGGAAGGATTTGTGTGGACAGGTATCAAacaattgatttatttcaatcctcCACAGCACAGGTTTATGTCCTTTTAACCTATTCAGCGTTTGTGTGACGACTAACCGTTAGGTAtttatcttc

Protein

Gene family

Family type	Membership / link
Ubiquitin family	DUB\|UCH\|UCH · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18031 all species →	UCH_C	Ubiquitin carboxyl-terminal hydrolases	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001578 all species →	Domain	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR041507 all species →	Domain	Peptidase C12, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10589 all species →	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0016579 all species →	Biological Process	protein deubiquitination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12185	VPS37; ESCRT-I complex subunit VPS37	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.