Gene detail

Detailed information of ENSJQFP00000008810.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000009166

ATGGCGAAGTTTGATTCGAAGAATTTGGAAATTCGAAGCAAGTCCGTTGAGCAAACGTTAGTGCCGCTGGTGACACAGATAACAACCCTTGTAAACCACAAGGATCAAGGACGCCGTTCCCACAGAGCTCGCCAGGCAATCAACGACATTGGAAAAGTCGTCGTTGCTGCTGTAAGTCGCTTTGTTAGCGTTGGTCAAAAGATTGCCGAGGAAAATGAAGATGTGGCTGTCGAAATGCGCGAAGCTTGTGAAGAGGCAAGGAAATCGGGACAGACGATTTTTCATCTCACAACGTTGACTGTAGACACGGCTAATGAAACGCCAAATGCGACCGACAAAACTGCTATGGTTCGCGCAGCCAGAACTCTATTGTCCGCCGTTACTCAGGTTTTGATCATCGCAGACTCTGTTATAGTGAAAAGACTTCTTCAGGCGGTAAAAAAGGTTGATGACAGACTGAAAGAACTGGAGAATGTCAACACATTTACTGACTTTGTGCAGGCATTTAGTCAGTTTGGTTCTGATATGGTACAACTTGCACACTTATCTGGAGATAGACAAAATGATTTGAAGGATGATAGTTTAAAAGCTGAAATGGGAGCAGCAAGATCAATCTTAGAGAAATCAACAATGATGCTTCTGACAACATCAAAAACATGTCTGCGGCACCCAGACTCGCGATCAGCCAAGGGGAATAGAGAAGGAGTGTTCAAGAAAATGAGAGAGGCTATGGCCACAATAACATCAGTTGTTCAGGATGAATGCACAGATGACGTTACCCACAAGGGATGTTTAGCTATGGATTTACGACAATTTGAAACGACACTACAGTCCTTCAAAGCAAGCTCTCCAGGTGACAATGAGGCAAAGATTAAATTCCAAAAAGCATTTGAGAATGTCTTAGAGGATGTACAGATGGTGATAAACTCACCTCATGTAAGGAAAGAAAAACGTGAAAAGATAGTAGCCCTGTGTGAAAATGCTCAAGATATATTAAATGATATTTTGGAAAGAAGCACAGATAACAAGattgtAGATGGAACAAGTAATTCTGACACTGTAGATTTGGCTTTACAAAGAATTAGTAAGACGTCAAAAGATCTTAGACATGAGgTACATCAAGTAGCAATAGATCAAGTGTTTGAGACATTTTCACATTTAGGCCACAAAAAGTCTTTACCTGCCTTGAGGAATGCTGCCGCTTCTGGAAGTGCTGGCCAGCTGGAGAACCTTGCAAATATATTCACACAGGATGCAAAACGATTACAAGAAGTATCCATAGTGACACGAAACATGGCAGCCAATAAACCAATTGCAATCACAGCAAAAAATGTAGAAGATAACATTACTACACTTTGTCCACAGGTAATTCATGCTGCTAGAACATTAGCATCTcacccagtcagtaaaatagcCCAGGAAAACATGGAAGTGTTTGTAGATGTGTGGGAGGCACAAGTAGAAGAACTTGGAAAAGTCCTTCGACTTATTACAGCAGGTGGAGATCCCAGTAAAAGCAGCCCTGCAGAGGAGGAGCCATCAACCAAAACAGAATCAAGGGTGGAAAAAATTTTGCAAAAATCAAAGTCATCAAGCAGAAGAAGTAGTTGTGAGTCTCTTGAAGAAAATGGACCACTAGAAAAGGCAACAGTAGATGCTAAGGAACAAGAAAAAATGGGTCAGCTTATAACAAATGTCAACTTAATGACATCTCAGCTTGAACTTCACTATTTGGAAGACACTGACAACGAAATAATATCCAGAGCAAGAGAAATGTCTCAGATGGTCAGTGCAATGTATCTATTTACAAGAGGAGATGGACCCCTTCAATCAACAGAAGAGCTATTTGAAGCTTCACAAaCTTTTGCAGATGCTGGAAAAGCACTCTATAGAGTGGCACGAAAATATGCCTCAAAGGCAGAAGAAAGTACCATGAAAAAGGAGTTATTAGGTTGTGTGGATAAAATCCCAGCATATTGCCACCAACTCATGTTTACAAGCAGATCGCTAGCAGTTGGACAGTCAGCCTGTTGCAGAAAGGTATGGGGAGTGATGCACTTGACCAAGAATATCATCAAAATTGTGGCAAGAGTGGTCAACAGTTGCTACCTTCTGGCAGAAAGGCACTCTCCACTGAAGTTCCCACCTGACCAGAGATTATGGAAGATAGAGGAGGACCTTTTCTCTGAAGAGTCTTCAATAACTTCAATCTCACGTCGATCATCATTacaaagcattgaaaacaacaactaTGATCCAAAAACCACTGTGGATCATGTCAGTGGAATGGTATATAAGACTGAGCTGTAA

Transcript

ENSJQFT00000009166

GGGAAGCTGATATGAAGGGCAGCTCAGCTAATTATAAGCCGTTTTGGGCAAAAATTATTTCAACTCCCATCTAACATGGCGAAGTTTGATTCGAAGAATTTGGAAATTCGAAGCAAGTCCGTTGAGCAAACGTTAGTGCCGCTGGTGACACAGATAACAACCCTTGTAAACCACAAGGATCAAGGACGCCGTTCCCACAGAGCTCGCCAGGCAATCAACGACATTGGAAAAGTCGTCGTTGCTGCTGTAAGTCGCTTTGTTAGCGTTGGTCAAAAGATTGCCGAGGAAAATGAAGATGTGGCTGTCGAAATGCGCGAAGCTTGTGAAGAGGCAAGGAAATCGGGACAGACGATTTTTCATCTCACAACGTTGACTGTAGACACGGCTAATGAAACGCCAAATGCGACCGACAAAACTGCTATGGTTCGCGCAGCCAGAACTCTATTGTCCGCCGTTACTCAGGTTTTGATCATCGCAGACTCTGTTATAGTGAAAAGACTTCTTCAGGCGGTAAAAAAGGTTGATGACAGACTGAAAGAACTGGAGAATGTCAACACATTTACTGACTTTGTGCAGGCATTTAGTCAGTTTGGTTCTGATATGGTACAACTTGCACACTTATCTGGAGATAGACAAAATGATTTGAAGGATGATAGTTTAAAAGCTGAAATGGGAGCAGCAAGATCAATCTTAGAGAAATCAACAATGATGCTTCTGACAACATCAAAAACATGTCTGCGGCACCCAGACTCGCGATCAGCCAAGGGGAATAGAGAAGGAGTGTTCAAGAAAATGAGAGAGGCTATGGCCACAATAACATCAGTTGTTCAGGATGAATGCACAGATGACGTTACCCACAAGGGATGTTTAGCTATGGATTTACGACAATTTGAAACGACACTACAGTCCTTCAAAGCAAGCTCTCCAGGTGACAATGAGGCAAAGATTAAATTCCAAAAAGCATTTGAGAATGTCTTAGAGGATGTACAGATGGTGATAAACTCACCTCATGTAAGGAAAGAAAAACGTGAAAAGATAGTAGCCCTGTGTGAAAATGCTCAAGATATATTAAATGATATTTTGGAAAGAAGCACAGATAACAAGattgtAGATGGAACAAGTAATTCTGACACTGTAGATTTGGCTTTACAAAGAATTAGTAAGACGTCAAAAGATCTTAGACATGAGgTACATCAAGTAGCAATAGATCAAGTGTTTGAGACATTTTCACATTTAGGCCACAAAAAGTCTTTACCTGCCTTGAGGAATGCTGCCGCTTCTGGAAGTGCTGGCCAGCTGGAGAACCTTGCAAATATATTCACACAGGATGCAAAACGATTACAAGAAGTATCCATAGTGACACGAAACATGGCAGCCAATAAACCAATTGCAATCACAGCAAAAAATGTAGAAGATAACATTACTACACTTTGTCCACAGGTAATTCATGCTGCTAGAACATTAGCATCTcacccagtcagtaaaatagcCCAGGAAAACATGGAAGTGTTTGTAGATGTGTGGGAGGCACAAGTAGAAGAACTTGGAAAAGTCCTTCGACTTATTACAGCAGGTGGAGATCCCAGTAAAAGCAGCCCTGCAGAGGAGGAGCCATCAACCAAAACAGAATCAAGGGTGGAAAAAATTTTGCAAAAATCAAAGTCATCAAGCAGAAGAAGTAGTTGTGAGTCTCTTGAAGAAAATGGACCACTAGAAAAGGCAACAGTAGATGCTAAGGAACAAGAAAAAATGGGTCAGCTTATAACAAATGTCAACTTAATGACATCTCAGCTTGAACTTCACTATTTGGAAGACACTGACAACGAAATAATATCCAGAGCAAGAGAAATGTCTCAGATGGTCAGTGCAATGTATCTATTTACAAGAGGAGATGGACCCCTTCAATCAACAGAAGAGCTATTTGAAGCTTCACAAaCTTTTGCAGATGCTGGAAAAGCACTCTATAGAGTGGCACGAAAATATGCCTCAAAGGCAGAAGAAAGTACCATGAAAAAGGAGTTATTAGGTTGTGTGGATAAAATCCCAGCATATTGCCACCAACTCATGTTTACAAGCAGATCGCTAGCAGTTGGACAGTCAGCCTGTTGCAGAAAGGTATGGGGAGTGATGCACTTGACCAAGAATATCATCAAAATTGTGGCAAGAGTGGTCAACAGTTGCTACCTTCTGGCAGAAAGGCACTCTCCACTGAAGTTCCCACCTGACCAGAGATTATGGAAGATAGAGGAGGACCTTTTCTCTGAAGAGTCTTCAATAACTTCAATCTCACGTCGATCATCATTacaaagcattgaaaacaacaactaTGATCCAAAAACCACTGTGGATCATGTCAGTGGAATGGTATATAAGACTGAGCTGTAACATAACATCACTCTAGATCATCTCAGTGGAATGATGTTTAAGCCCAAGCTGTAATATGGCATGCACTTTGCAAGAGAGCTCAAAAGTGAATTTCTTTGTTTCTAGGCATCAGGATCAAAGGACTTAGTTTGTTTCAAGTttggtttagtttcttttttaacaAGAAACACTATGAAACACCATTATGATTCAACACTCTATTCAAGGAGATACAATAAGAGTTTCCAAAGCTTGTCAGATTTTATGGTCTGATGCAAAGAATGTGTAATATTTTCCCAGATCAAAGGTTTTCCACATTTCCTCACCCCTCGACTCCTACAGTGAagccttttgattctatgggcagaaccctaaagtgtgaccattcgttggatagctgttgagcagcactttactgtggtgctgtttgttaaccctttgactcccagagtgaaaccttgggtgatacaaatttttgtaCATtatgattctgtggacagaaccctaaagtgtgaccatttgttggaaagctgttgagcagtactttactgtgccgTAATGTATCGacagttttgggcttggcacaatcaggagtgaaagggttaaagcagttCAAACATGGTCAAAGCATTCAAGTATAAATTTAGCAAATTTGTGACTAAAACATGACAGTCATGATATATACGTACCACTCTTAAATTGCCAACTAGCCTTTGATTCCCTGCCAAGGCATTTGAATTAAGTGGTGCCTTCAGCAGATTAGTCAACTGCCTTTGCAGTCTCACATGTATTTATTTATGGATCAAGAATCTACGACCAAAGTCCAAATCAATTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01044 all species →	Vinculin	Vinculin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036723 all species →	Homologous_superfamily	Alpha-catenin/vinculin-like superfamily	Interproscan
IPR030045 all species →	Family	Alpha-catulin 1	Interproscan
IPR006077 all species →	Family	Vinculin/alpha-catenin	Interproscan
IPR001033 all species →	Family	Alpha-catenin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46342 all species →	ALPHA-CATULIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007155 all species →	Biological Process	cell adhesion	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0007266 all species →	Biological Process	Rho protein signal transduction	Interproscan
GO:0045296 all species →	Molecular Function	cadherin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05691	CTNNA; catenin alpha	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.