Genomic Location: chr14:250864...252808
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families
| CDS |
| ENSJQFT00000009753 |
| Transcript |
| ENSJQFT00000009753 |
| Protein |
| ENSJQFP00000009379.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006892 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03372 all species → | Exo_endo_phos | Endonuclease/Exonuclease/phosphatase family | Domain | Interproscan |
| PF21171 all species → | PDE12-like_N | 2',5'-phosphodiesterase 12-like, N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036691 all species → | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR005135 all species → | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR048821 all species → | Domain | 2',5'-phosphodiesterase 12-like, N-terminal domain | Interproscan |
| IPR050410 all species → | Family | CCR4/nocturin mRNA turnover and transcription | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12121 all species → | CARBON CATABOLITE REPRESSOR PROTEIN 4 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003824 all species → | Molecular Function | catalytic activity | Interproscan |
| GO:0000175 all species → | Molecular Function | 3'-5'-RNA exonuclease activity | Interproscan |
| GO:0000288 all species → | Biological Process | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K19612 | PDE12; 2',5'-phosphodiesterase | EC:3.1.13.4 EC:3.1.4.- | Mitochondrial biogenesis | ko03029 | deepkoala |
