Gene detail

Detailed information of ENSJQFP00000011600.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000012104

AGACATTTGCTGCCTTGTTACTCATGACCTTCAGCACAGATGGCTTTTTCGCCCTCGAATGAATTATGTGTTAGCGCACTTTATTTAGTGGAAGTTGTATCAAAAGCAAAATGTATTTCGCCTTACGCCACTTCCGTGTTTCCAAGTCATACTCCAAACGAAGCGTGTGACGTCATGGCTCGCGGGCGACGCCGTGGCTCTGCGCACGCTCACAGCTGAGAAAAGCTCACGGGAGCGGCGGTTCTTCTTCACGTAGTTTAAAATCAAAGAATAGGTGCTCGTTGTGCTCTCAATTCATCATGTTTACTTGGATGAAAAGACACGAAGGTCAGAAAAACCCACAAGTTTTCAACTCCGTGGTGGATGGTTTGAGAAAACTCTACTACAAGAACTTGAAGCCTTTAGAGGAATGCTATCTGTTCAATGACTTTCACTCTCCGGCCATGTCTGATCCTGACTTTGTAGCAAAGCCCATGGTTTTGCTAGTCGGCCAGTATTCAACAGGTAAAACAACGTTCATCAGATATCTTTTGGAGCGGGAATTTCCAGGCATCCGAATTGGTCCTGAACCAACTACAGACAGTTTCATCGCTGTTATGCACGGGGAAAATGACCAAGTTATTCCAGGTAATGCCTTGATTGTGGACCCGAAGAAACCTTTTCGTAGTCTGAGCTCCTTCGGAAATGCGTTTCTAAACCGCTTTTGTTGCTCTGAGCTTCCCAGCGCCGTTCTTGAAAGTATTACAATCGTGGATACGCCAGGGATATTATCCGGCGAAAAGCAAAGTGTCGCAAGAGGATACGATTTCACAGGGATCCTGAAATGGTTCGCAGAACGATGCGATCGGATAATTCTTCTGTTTGATGCACACAAACTTGATATCTCTGACGAATTCCAGCGAGGAATCGAAGTTCTTCGGGACTACGACGACAAAATTCGCATTGTTTTGAACAAAGCCGACATGGTTACGACTCAACAACTGATGAGAGTATACGGAGCTCTCATGTGGTCATTGGGAAAGGTTATTAATACACCTGAAGTCGCACGTGTTTTTATCGGATCGTTCTGGGACCAGCCATTGCAAATCGATGACAATCGAAAATTGTTTGAAGCTGAGGCGAACGATCTTTTCAGCGACATTCAAACGCTTCCAAGAAACGCCGCTCTGAGAAAGTTAAACGACTTCATTAAAAGAGCCCGACTTGCCAAGGTTCATGCTTATGTCATTGCTGAACTAAAGAACCAAATGCCAGCTGTTTTTGGCAAAGACAAGAAAAAGGAGCAACTGTTGAACAAACTTTCTGACGTATACATGAAGATCCAACGAGAGCACAACATTTCTCCAGGGGATTTCCCTTCAGTTGTTAAGTTCAAGGAGCAACTTCGCAAGTATGATTTCTCCAAGTTTCATCCGATGAGACTCAAACTGATTGAATCACTGGATCGTATGCTGGCAACTGACATTCCTCGTCTTATGGCCATGATACCTTTGGAGAAAGAGAGTGATTATGGCCACAATGCTGCCGTTAAGGGAGGAGCATTTGATGTAAGCCATGCCTCCAATAACCCATTTGCAACTGGAGCGTGTCAGGGAGCAGCACTTGGTGCTGGCTCAAATGTCTGGATTGTTGAGGAGTTTAAGCCAGATTATGACAAGATTTTCAAGAGTTTGAACCCACGAGATGGCAAGGTCAGTGGTGCAATAGCAAAGAGGGAGATGGTGAAATCAAAACTACCAAACACTGTTCTTGGCCGCATCTGGAAGCTTGCCGACATTGATCGTGATGGGCAGCTGGATGAGGATGAGTTTGCATTGGCAATGTACCTTATTAGGATAAAGCTGGATGATGACGATTTGCCTGACGAACTTTCTGCTCATCTCATCCCACCGTCAAAGCGGCTGCAGTCTTCAAATGGTATGGACTATGATTAAAAGAATAACCATGGAATTTGGCAGAAGTTTGTCCTGCTTTTCTTGAACGGTTGTTGGAACAGATTGACTAATTGCTGTCCCAGATaataaacagcaaaacagttataAAGATTTAAATGGATGATTTTCATGAGTTCTTAAGGTTTTGCATCATGCAAGTTACTGTTACTATAACTACTTACTAGAGAGTTTTAATATTTTGGTCAACTATGGTAAAATTTAGACAGTGACTTGAATTATTTTAGGTCAGCAGTAAAATTGGTTTTATGGATGCTTGATTGAGAACCAATTTTACAATCTCTTTAGTTAATTGTTGACTTGACTCAGCTTTGTTATTTAAGAACAACTTGGAACTTTAATGAGAAAATGAGTAATTGTATCAGTAAGAAGTCAAACGGCATTTTATAAATGCATATTCTTGTAAAAGAGAGAAAGTAAGGGTGTCTTCTTTTGACACTCTTGTTTAAAGAGGATGCTCTAAGTAGATGGTAATAGTTTTCTTTTAGGACGTATTGAGTTTTTGGAATGAAAGGAATTGTGATCTCCTCATTCTCCTCCCAAGAGCAGATATGAATGAATGGATTAGGATTTCATTAGTGAATATTGTTTTGTATTCTTGTCCATTCCAAGTATTGTTCTGGAAGAGTGCCATTAGAATTTACAGATCCATAAGTCCTCAGGTGACATCAGAAGCTGCATTCTTTTTTCTCTTAAGTGTAAATATACAGTGCAACAAGGCATTCTATGCAGGGTTTCCAGTGATATTTTGATTGAAGAAATTTTATGTAGATGATGTTGCTTATTACTTCTCATCCTTAAAGTCAGGTTTTAAGACATGCTTTGTGGTTGAAAGAgaggttttgttttgtgttttggcttTTAAGACTCCAGTATGAGGGTTAAAAAGGGTGAAGTTGGTGACTGTTGTAACATACCtcaatgatttatttggaaTGTTATACACTTTGGGGTAGTCCTTGCTGAGATTAGTACATTGCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16880 all species →	EHD_N	N-terminal EH-domain containing protein	Family	Interproscan
PF18150 all species →	DUF5600	Domain of unknown function (DUF5600)	Domain	Interproscan
PF00350 all species →	Dynamin_N	Dynamin family	Domain	Interproscan
PF12763 all species →	EF-hand_4	Cytoskeletal-regulatory complex EF hand	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031692 all species →	Domain	EH domain-containing protein, N-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR040990 all species →	Domain	Domain of unknown function DUF5600	Interproscan
IPR045063 all species →	Domain	Dynamin, N-terminal	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR000261 all species →	Domain	EH domain	Interproscan
IPR030381 all species →	Domain	Dynamin-type guanine nucleotide-binding (G) domain	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11216 all species →	EH DOMAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0016197 all species →	Biological Process	endosomal transport	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12476	EHD3; EH domain-containing protein 3	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.