Gene detail

Detailed information of ENSJQFP00000012676.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000013204

GTTCACTGCTTAGAGACTTTAGGGCCTTGATTGGTGAATCATGCCTTAGCGGTTCGAACATGTGGTGTGCTTTCCGCACTCAACGAAACCGATCGTTCTAATTTTACTCCACTCCTTTTCCAATGACCGTGATAAACAGGACCGAACAGACACTCGATATTTCAGTTCCTTTTTCTGAAATATATCGACGACAAGATACCTTGACGGAAAGGTCAGCTTCAACGAAATTGTAAATAGAAGAAGAAATGCAGAAGAGTTTCCCCCACGTGCAAATTCTGAAATTAACAGCTAGTTTATACCTGATGCTGGTTCTTGGCCATTCTTACGTCTTTTCATCAAACGGGGTGTCACGTGACATTGGTCAAAGCGGTGCGTGCTATAAACATAGCCAATCAGATAGCTGCGAAAACGCCATTTTCAAGGAACACGACCACAGTAGTACGATTGCAGAAACGGACAAAATGACGAGAGGATTTTATAAGCCGGATCCCCGATTTCATGGAGTTTACACATTCCCTACTGACTCAATTCCGCGAAGAGATTGTTCTGATGAAGAGGCTATGCAGTATCTTCGAGCAGCGATGCCCGTGGTCCTTGAGAATTGTACGTTTCCCAGGTCTGCGTTGAAATGGACCACGGAATACCTGTTGGAGAACCTCAAAGATGAGAACCACACAGCTTACCTCTCGACGAGCAGGAAATTTTTGTACTTTGATGAGGACAGACTAAAAGGAAACTTCAAACTGTGGAAACCACCAACTACTAAGATGCTGATTTCCTTCAAACATTTCCTCGACTTAGTGCAGGAATTGAAAACTGCTAACAATGGGAGTCGAGCGTATTTCCAGTCTGTGCTCTTCATACAGGACGGGGTTAGTTCCTCCATGCTGGACGATATTAATTCCTTCGACTACGATTGGCTCTTTCGCTTGGTGACGCGTATGCACTGGGGCGAAGACGTTACTAACCTCATATTGGTTGGCATGCCTGACGTTGTCACGCCTGCGCACTACGATTCGCTGGAGAATCTTTATGTTCAGATCTCGGGCAGAAAGCGAGTGATACTTTTCAACCCAGAATATTTCCGGTCGTTGTACCCGTATCCAGTCGGGCATCCTCATGACAGACAGACACAGGTCGAATTTGATGATCCAGACTTCAGCAGATTTCCAAGGTTTCGTGAGATTAAAGGCATGGAGGTAGCCCTTGAGCCCGGGGAAGTACTTTATATTCCCAGTTACTGGTGGCATCACATTGAAAGTGAGAAAGACAAAAACACCGTGTCGGTGAACTTTTGGTTTGATCCAAAAAATGAAAGCGAAGGCCAAACAGGTCAAGAAGAAGTTGATACATCGAGCTATTATTCTGGAGTCAAAGAAAACGATGACAATCAGCCACAGCGGACGACAGTTGAACAGACAAACGATAACCACATCACTGTGGAGGCGAATGAAAAGCTAGAGACTCAAGCAGAACAACCCGTCAACGATGAGACATCAGGCGGCGTTAGTGAAACTTTTGTGGAAAACGGCATGGAGGAAGAGCGAGAAATCGATCTAACGGCTTCTGGCTACCTGGCCCTCGTGAGAGAAATAGAAGTTGCGCTATTCAAAGCTACCTTCAGCCATAAAAAGATGAAGCAAATTCTGGAGGAGATGCTATTTGGAAGATTCAATAATTTGTGACAGATTTAAGGAGTTAAGTCGAAACATGGTGAACTGAAAACGGAACCGGAAACCCTGTCCTATCATTTTACAAGACTTATTGTAGTATGAAGAGAGATGTAGGAGATATTTTTGCAAGCGATCAGTGGAGGGTGATTTAAAAAGCATCTCTGACTGACTAGTGCGCTAGAAATGAAGGAGTCATGGTAGTTACAGTGCAAGTTTTAGCCACAAACATACACACTATTGAAGACGACAGTGGTACTGATAAGGGGTGAGACCCTACTCTTGCCAAGAAAATAACTAAATACTggagcttaaaagccagcagtTTCTTGATTCCGTTGCCAGTTCAAAAGATTTCAGTTTCGTTTTCTTTAGGCTGTGACTAAACCAGCCGTACTGTACCCTGCGAGGAATAGACTCCTCTTTACGAGCGCGAAGAGAAGGATTCGTGCGCGTAAGGAGAAGGGTAGCCATATCGCAGATATCGAGATGGATGAGCACAAGAAAGGAAAGATTTAAAGACAGAGGCAAACAAATAAGCAGACTGAGAAAGAGTGAATAAATGGatgaataaataagtaaattattcagtaagaaaataaataataaattgccAACTTTCATCTCCAGAGAAACAGCTTTAAAAGTGAACGACTGGCCCTAGTTTTCTTTTTGCGATGATCACACAGCGGCTGCTAATTATAACGAAAAAAAACCTTACTAATCAGTATTTACTACTTTATTTAGCCGACTTTTCTCTGCATCTGTTTTCTGTTGAGACATGGAATCCAATGTGGGTCAAGAGAGCATACTAAATTTGAACCTTAACTGAAATGAGAAATTGTAGCACTAAGGTTTTTCTTTTGCGAATTAGGAGGATAAATGCAACGGCCAAAGCATTGTAGTAATCACCAGAGGAATGATATAAATGTAATTAAAATGCAGCTGATTTAGCAAAACACTGTCATTAGGTATTCCCTTTCCAGCTCCAAGTGCACTGAGGCGACGTTACAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13621 all species →	Cupin_8	Cupin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR041667 all species →	Domain	Cupin-like domain 8	Interproscan
IPR003347 all species →	Domain	JmjC domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12461 all species →	HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016706 all species →	Molecular Function	2-oxoglutarate-dependent dioxygenase activity	Interproscan
GO:0036139 all species →	Molecular Function	peptidyl-histidine dioxygenase activity	Interproscan
GO:0036140 all species →	Molecular Function	[protein]-asparagine 3-dioxygenase activity	Interproscan
GO:0042265 all species →	Biological Process	obsolete peptidyl-asparagine hydroxylation	Interproscan
GO:0045746 all species →	Biological Process	negative regulation of Notch signaling pathway	Interproscan
GO:0071532 all species →	Molecular Function	ankyrin repeat binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18055	HIF1AN; hypoxia-inducible factor 1-alpha inhibitor (HIF hydroxylase)	EC:1.14.11.30	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.