Gene detail

Detailed information of ENSJQFP00000013014.1 in Rhodactis osculifera

Genomic Location: chr2:27293383...27306197
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSJQFT00000013561

CTTcatcatcgtgttgagtgaaaAATCTTTCAAGCAATTTGTTATATTTAAGGGTCTTAATACCCTAGTTTGAGGAAAGATGGAGCATATGGGTAGTACGACCACTCATCCTTACAATTCTGGGTACCAAGGTTATGTTGTGGATTCTCCACATAGGAGCAGCATTCGTTCGGTGTCTTCTTTTCCTGGTGCAACTGGATCCATATCCTCCTTTCATGACATTCCACATCCCCCTTTCCATCAACGGGTTTCTGGTCTGGCATCTCCAAAAGGATCTGCTCCACAAACTAACAGTACAGCTGTGGTATCAGCACTGAAAGGGTTACAGGAAAAGATTCGTAAACTGGAGCTGGAGAGAGCAGAAGCAGAAGATAACTTAAAGAGACTGGCTACCGAGTCACGTCATTACAAAAATGTGCTACAAAAGGAACGTTCTGTGAGGGAAGCTAGTGAAGGGGTCATTTCCAGGCAAAATCAACAACTAGAAGAAGACCTCCAAGCAGCAGAAGCAAGATGTAATTTACTAGAAAAGCAACTGGATTATATGAGAAAGATGGTTCAAACTGCTGAAGTAGATAGAGACACTGCCATTCAACGATCTGCAATGGTGGCAAAACATGCTGCCCAGCAAACATCAGAAGACATTAGGGAACAGTTAGACAAACTTGTTGGGCTGGAAAGGGATCACATGAAACTGACAGCATCACATTCTGTTGCTGAGggtAAAATTAGAGAGCTGGAAGATAAATTGAGAGAAGAGGCCCACCAAAGAAAATTGGTGCAAAGCAAGACAGCTGAGCTGGAATCAGTCGCCGAAGCGAATAAAATACTGATGAATATGGCTTCACCACCTCCACCAAAGGTtaagaaaaagagaagaaagCCTCCAAAACCGAAGCCAAGGAAAACGTCTCAAGCAGTAAAGCCGTCGGATCATTATCGCTTAAACTTCGGAAATATCCCTTTTGTTGTTGGCACGTCAACTGGAAAGTCCCACTCAGTTGGAGCCAATGTACAAACCGTGTTGTCTTTAATGAAGGCCCACAACCCAGCTCTCTGTGACGCAATAAAACGCCGTAATCAGCGGCGTCAAACACAAAGTACAGGGTCGTCTTCCACTAGTGATTCGGAGAACGCTTTTGAGGAGCTTCTGGTTGGACTGCAGGATGAATTTGGACACATAACTTTCGAACACCGAGAACTGGCTCGTCAAATACAAGAATCAGACGATCCTCGAATACAGGAAGATCTAAAGCGTGAACTTGAAAATTTAGAGTTGCGCATGGAGGCAAAGGGGGAGCAGATCGCAGTGGTACGACGACAACAGCAGAAACTAAAAAAGCAACGTAAGCAGGAAAGGAGTTGGCCAGCAGTAAGGCCAAAAAGCACCAGCGCAGTTCTAGCCACCAACGGAGGCGAGGTGGAAGTGACAACAACAGTTAAGACAAAAGGAGCAAAAAGTTCACAGAGGGTAGGAGCGTCTAAGAATAAAGTAACTGTCCTGAAGGGAATGCAGACGCTACAAAATTCattgacaaagaatcaataCCACTGGGATTAGAAAATATTGATGTAAACATGTATTATTTTTGGTTTCAATCCTTTAATCCGGGGCAGTAGTTCTAATTGCTTTTTCATTTCGGAatttttcttggtggtgaatTGGACCTTATTAGAAGTTTAATTGTAGGTGAAGCTAGTTTATGATCTTTTATCAAATATTCCTCCCCACAATTCTGTGATTGTATGCATATTCTCATTGTCTTTGGTAAGCAAAAACACATTTTCTACTTTCTTTTTTCACGTGTTTGATTATCTGAggtgaattttattttttgttattgccGCTTTTGAATTCCAGAAACAAGCATTCAGGTGACTCATTGTATTTGGGGAGAGAAGTAACCAACACTAGGTCGATCTTCTAAGAATATTTACACAATTCAACAATTTCTGAATGATACATAAGACAAAGCATATACAACGTAGTAATTTATTTGTACAAGATTGTTGATTCCTTTGTGAAAGTAATGGTTGTAAAAAGATGTAAATAAAGCGTATTGCCTGCATGCAATGGAAAAATGTACAATAAAACATATACCTAATGTTAGGCATGAGTGGTATCTGAAAGATTAGTAGACCAGAGAGCGGGCCTTGAGCCGAGTAGTGCATGTGCATGTAATTAACAGGTTTAGATtggtcgccattttgaattcataACATGGCCGCCACATGGAACGTATCATTTTGTGATCGTCATGTCAAATGTATTTACTTTACAGCCGCCATGTTAAAATCACTTTCTTACGGAAGACCTCAGGTAACAATGACCTCAACCAGGTTGAGTTCGCAGTTCTCGAAGTGTCACACTAAGCAGTGctttaagtggaaaaaaaataagGGCCAGTACTCCCCTTATTCGACTGTTGAGTATCATCAAGCACCAGAGAGAAATAGAACAAGAGAGGGTACTATTGGTTCATGTGAAGTCCCAGTATGCCATAAAAAGTCCCGGTATGCTAGAGGCTAAAATTGAGAAGTGCTGGTGCTCCATACTGGT

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006097 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06657 all species →	Cep57_MT_bd	Centrosome microtubule-binding domain of Cep57	Domain	Interproscan
PF14073 all species →	Cep57_CLD	Centrosome localisation domain of Cep57	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051756 all species →	Family	Centrosomal microtubule-associated protein	Interproscan
IPR024957 all species →	Domain	Cep57 centrosome microtubule-binding domain	Interproscan
IPR025913 all species →	Domain	Cep57 centrosome localisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19336 all species →	UNCHARACTERIZED DUF1167	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0042802 all species →	Molecular Function	identical protein binding	Interproscan
GO:0043015 all species →	Molecular Function	gamma-tubulin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16762	CEP57; centrosomal protein CEP57	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.