Gene detail

Detailed information of ENSJQFP00000015469.1 in Rhodactis osculifera

Genomic Location: chr16:11998084...12003821
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSJQFT00000016099

TGATAAACATCCTGCAGACTGAATGCAATTAAAATTGATTTAGCATAACCAGTTTCAAGCTAAGGGGTTTCAACAGGTCAGTATGGTAAAAATCGACGTTTTTAGCGATGCCCGTCGCGCTTACACAGCTGCTGATGATATCCTCTAGGGTGGGGTGGTGGGAAGAATGGGCTGATCATTCCATAGCAACGACATAACAacatttcaagatggcggacatgCAAACACCAgctgttttgaaaaaaagtcaATGCCTTATGTGGTTTTATAGTAAAGCTTGACGATCGATTTCGTCTGAAATGATGAATGTACGAATTTCATTACccgaagaagatgaagaaccaAGAATCAGACATCCCAGAACCCGAAATCTTGTACCGTCGAAGAAGTATCGCGATACGGTGAATAGATGGGGTGAACCGACAGAGCTCAAAAGAAAGCGAGTCATCATTGTTCCGAGTGTTAAATGTCCCGCCAGTCAAGTCACCGTAATATCTGGCGTTAAAGaaaatgatgatgatgatgatgatcaagaAAGTGACAGCTTTACTAGTCAAGTGGAGGCATACAAGAAACGGTTACAAGAGAGAAAGAAATTGAGAGGAATTCTGAACAGCTGTGGTCTTCACCAAGACTGGTTGAAAAACAAGAGCGAAAAGACAGAATTAGAAAAGAGGGTGCTTAAGAGAATGCTTCTAAAAGGCAGGCCTGAAATCAccatcaagaagGCTCCTACTCCACCCCCTGAAGAAGATGACATTACCGTTACCGGCCAAGACAGAGGTGTGCCAACTATTCGCCAACCTTCACCTGCTGCCTTGGCTGTGATACAAGAATATCTGGAGCGCAGGAGAATGCGTCTCTTGGATCTGTTTGCGCAAGCTGACAAAGACAAAAACTGGGTTGTTTCCAGGCAAGAGTTTAGGAACATCATCAGATCGGCACGTATACCTTTGACTGAGGCCGATGTTGAAGATTTAATCATTGCACTAGACCGGGACAACAGTGATGCTTTGGACTATAGAGAATTGGCAGTTGGGCGACAATCATACTTGGAGGAGAGGATCAATAAACAAGGTGCAGAGTTCGTTCAAGCTGCCAATGGCAAAGCCAGCAAGAGACCCGAGACCATTCCAGAAGAGCCCGAGCCTCCATCGGAACAACTGAAGGGGGACAGGTGGTCCAGTGCTGGAGGCCAAAGACCAGGTTCTCCGCAGAGACCTTCCTCTCCTCAGAGGCCTTCCTCGCCGAAGTTGTCGGCCTTGACGAAGCGATCGTCCACGCCGCAGATGTCGGCCACCTTACCGAGGAGACCAGCTTCTCCGGGATCGGCGGTTTTGTCAAAAAGGTCGTCCTCACCACAGATCTCCATGGCACCGAAAAAGCCAACCTCACCACAGAGACCCTTGTCTCCCTTGTCGGTTCAGGGACCGCAGCCAACCTCTCCTGGCCAGAGACCGGACTCGCCCAGTCGGTGTGGGTCGCGACCTGGATCAGCAACAAGCACGGGTAGCGAGGGCGTGTCTCCTACCTTGCTGGAAATACCTGCTGTTCAGCTGTCAGAAAAGGTTGAGCAATTGTCACGTGACGAGATTAAAGAACGGCGCATGAAGAAACAgcgacaaagaaaacaaaaggaaaaggcgaaacaaaaaaagaaagcccCGGAGAAACTGCTGGTGGCACCCTCCACCCTGGGGGGTACAGTGGGGGAGATGGTGGATCGCTATCGACGGTTGACGATGAAAGAATACAACGATGTTGTGCAGTTGTGCCAGATGCATGGAGTGCAGCTCAGCAAAGCTCTTCTGGGGAGGGttctACTACAGCCGGAAGACAGGCCAATATCACAGATGAAAATGACTAGAAGGCAACCTGGCCGCTTCACGATATCAACGAGACATCACGTGCCAACTGCTCGTACCCAGTCTAGGTCCACCACCAGGAACCAGCAGTATGCAAAGTTTAGAGACTTGGGATCTCCTACGTGATGGGCAAGGGATTTTCACGTTGTGTAGAACTCGCAAATACATTTTAAGAATATATATTTAACTTAAGGAACAGCTAACAGATAAATCCATGATCAAGTTGGAAAGAGGTTAGGGAAATAAAGGATCAAATGGTAAATTGAGATGGATTGGATCTTCAAGCATAGCCATTTAACAATTGGTATTAAACAAGGACAAGATAACAAACCTTCGAAAAACAAGAAGCTTTCAataaggatttagtttcgaaagaaactgtgtgttgcgtcggtgggaaagtgaaactaaaatagattatcaaccacaaggtcaataaggtaaattggccaccgtaagaaagattcgaagactgaccttgtggttgataatctgtttaagTGTTATTCAGGCCAAACACTCTCGAGCCT

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007531 (this species only) · gene tree & orthology

Pfam domain

No Pfam domain signature was recorded for ENSJQFP00000015469.1 in Rhodactis osculifera.

InterPro

InterPro term	Type	Description	Source
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR042847 all species →	Family	EF-hand calcium-binding domain-containing protein 12	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47225 all species →	EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 12	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14840	NOP53, GLTSCR2; nucleolar protein 53	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.