Gene detail

Detailed information of ENSJQFP00000017258.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation ROSCU · all data for this species · gene families

Sequence

CDS

ENSJQFT00000017938

ATGGGAAGCTGTTTGGAAACAATTAAAGAACAAGACAACGACCATGGGACATCGGAGCACGAAGTTAAAACCTCCCAAATCGACGTATCTTGGCCGGATGACTTCGAAGACATGGTAGCCATTAATCTCCCTGACGTTGCAGAGGAACGCTGCAAACTCACATTAAACCTTAGTTTCAGGAGGCTGAAAAGCTTGCCTAACGAAGTCTGTGAGATGAAAAAGCTGCAAGTGTTAAACCTGGATGGAAACATGATCTCGAACTTTCCGTACAAATTCGCAGCTCTGCGCAATCTACAAGAGCTTTACCTTGGAAACAACTATTTGAACTTTCTTCCTGCTCAGATTTGCGCATCAGTCAAACTAGAAGTTCTCGATTTGAGCAGAAATCGCATAGAGACATTGCCATACTGTGTAAGCCACTTGAGTAATCTTCGCAAATTGAACCTTGCCTTCAACAACGTTAGAAACCTGCCGCCAAGCATTCAACACCTAAAATATCTGCAGTGTTTGAACTTGGAAGGAAACGGGCTTGTTAATATTCCTGAAGCTATATTTTCCTTGACCAATCTGGAGGTTTTGGTTTTAAGCGACAACGATATAGACGAACTGTCGCAGGATTTCGAGAAGCTAACAAATTTGCGAGAGCTTCACTTGGATGATAACAAGTTGCTCGATCTTCCTGACATGTTACTACGATTTCTTTCTAAACTTGTTGTCTTAGATGTAAGCAATAACTCAAAGTTGTTGAGCCTTAATGAGAAAGGGAGCCCcaagaagaaaatgaaacacCAAAAGCCTTCCCGTATCGATCCAAATGAGATTCCCGAAAAGTCTCTGCCATTTCAAATTCCACAGAAGACGATGGTTGATGACAATTCTATGGTTTTTTCAGAAATCAATCTCGGTCATCCTGCAGAGAATCCTAATTCTCTGTTTGAAGGGAGTACACAGCCGGTTTATTTAAAATCAGAAGATGCCAAGCCAAATGCCATTGAAAACGCGAAAAAGAAGGCCCAAAGAGCAAGGAAAAGAGCGAACAGGGCTCTTCGTCCATCGCCAAAGTGGGCAATTCTCTACCGCGAGTTGAAAAAAGCGGGTTTTATTCCAACTGTCAACGTGCAGCTTCCAAAACTAAGAACGGAAACACGAGTGAAGGTGGTAAAGCATGGATCGCGTTACACTTGGAGGGGTTGGCGAGTACAAAACAGCGATACGGCTGCGTCACAGAGGCGACTCTCATTGGGATCTGCTGAGACATTCGACGAGTTTGGACATCCAGAGAGTGCAACCAATTCGTTTCCGAGCGTCAAAAGAGTCGCTGGGAAGTTGATTCTTGATCTGAGTTGGCAAGACTTCAGATTCCTGTCTTCTAAAATCTGCCAGCTGGTTTATCTCAATACGCTTGTTCTTGATTATAACGACGTCCAAGAGCTTCCCGCTGATGTTGGTGAACTTGCAAGGTTGCATGTCCTGAGTTACAATGCAAACAATCTCAGTTGCGTGCCTGGCAACGTGAGATTTCTTAACAATCTCAAGCGCTTGTGTCTGAATGGCAATTGTCTTAAAGCCCTTCCTGACTGGATTGAAACCTTCCAACAATTAACTTATCTCTCTGTGGAAAACAATGACTTGCCATGTTTTCCCGGGGAGATCTGTTCTTTGGAAAATCTACAATACCTTCTACTCGCTGGAAACAAGATAGCGGAATTACCAGAGAAAATCAGTCAGCTTAAAAACCTACGAGAATTGTTTCTGGGGAGAAACACGATGCGGGTTATTCCATACTCAATCGCCGAGCTTGATTCATTGCGTGTGTTGTACATTGAAGAAAATGGACTGCAAGATATTCCGCTTTCCATCCTAAATATCACAGGGTTAGAAACTCTGAATCTCAGTGCCAATTCTTTGTCCTCTCTGCACGATAACATCACTTTTCTCCAAAACTTAGAGGAACTCGACTTGGGAAAGAATTGTTTAAACGGCTTGCCATTTTGGTTTCCTCGCCTGAAGAATCTAAGAGTTCTGTTTTTGAATGCAAATGGATTGTTCACCTTTCCTGAAGTCCTTTGTAAGCTGCCCAGTCTTCATTCACTCGACTGCAGCAAGAACAATATCACAGAACTCCCCGACTTTGTGAGAAGCAGTATCGGAGAAATGACGAGCTTGGAAAAGCTCGACATTTCGAACAACCAGCTAAGGGTTCTCCCGGGAAAGTTTGGAGATCTAGCCAATCTCAAAATTCTTCACGTCGAAGGGAATCCTTTATTGGAGCTTCCTGGTTGCCTTGATGAATTGAACGAGATCCAAGAGTCGTTCAGCAACTTTGACCTGAACAGCGATGGCCATATCACAAGTGGCGAGATTGGCAGTGTTTTTAAAAGTCTCGGGGAAGATATTCCAGGCTACAAACTACGTGAGATGATAGCGGAACTTGACAAGAATAAGAATGGAAAAGTCGAGTTCGATGAGTTTTTAGAGaaacactctattgtctttaaacAGAAAACTGAAACTTGTAGCCAAATTGTGAAATGGGAAATTCAGGTAAAATacctgttttgtttgttcttgcAGATGTACAAGAAAAATAGCAAAAAGTTCTCAGCGGGAACAGAATTCAAGAAGCAGATCAAAAAGAGGGACCTGGTGGAGAGTGGAGGTGGAACATCGGAAAGCTCTGCAGAAGGAACAAAGCACTCATATTCAGAGGCAGAAAAGGTGGCCTTTGTGGACTGGATAAACACTTCACTTCAAGATGATCCATTGGTGAAGAGTTATTTACCAATAAACCCGTCAACATCTGACATTTTTCAAAAGATTCAGGATGGAATAATTTTATGCAAAATGATTAACTTGTCTGCGCCTGATACTGTTGATGACAGAGCCATCAACAAGCCCAAGGATGGAAAGTTGAGCATCTATAAAGTTCACGAAAACATGACTTTAGCTTTGAACTCTGCCCGCTCCATCGGCTGTAATATTGTCAATATCGGGGCTGAAGATCTGGAGAAAGGGAAACCTCACTTGGTGCTTGGAGTATTGTGGCAAATTATCAGAGATTCCGAATGTTATTCTGTTCTGCTGAGCCGTATCACTCCCCCCGAAATGTATGTGGATAACAGACCAATGCAGGAAAAGGACCTGACAAAACGAGCTGAAAGGATGTTACAAATGGCCGACAAAATTGGATGCAGAAAGTTTGTGCGCCCTAAGCTGTATGACATTGTGAAGCCAGGCAGTGTCAAATGGGACAAAGTCAACCGGCCTCCGTTCAAGCAAAtgggtggaaaaatgaagaagaTAGAAAACTGTAACTATGCAGTGGAGGTTGGTAGATCATTGAAATTTTCACTGGTTGGAGTCGGAGGCCAAGATATCCATGATGGCAATGAGACGTTGACCTTGGCTGTTGTTTGGCAGCAGATGAGGGCCTACACTCTGACCTTGCTCTCTAAGCTGGCGAAAGATGGCAAAACGGTTGAGGACAAAGACATCGTGGAGTGGGTCAATGAAAAGCTGAGGAACGCCGAGAAAACCAGCAGCATCAGGAATTTTCAGGATCCAGTCATTAGCACCAGTCggccagttttggatttggtcgACGCCATCAAGCCCGGCACAGTACAATACGACATGGTGTCAGACGGAAACACTGATGAAGAGAAGCACGAAAACGCCAAGTACGCGTTGAGCGTGGCCCGTAAAGTCGGAGCGACCACGTACGCCCTACCAGACGACCTGGTGGAAGTCAAACCCAAAATGGTTCTAACAGTGTTCGCCTGCTTGATGGCCGCAGATCTGGCATTGAACTCCTGA

Transcript

ENSJQFT00000017938

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR039959 all species →	Family	Fimbrin/Plastin	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19961 all species →	FIMBRIN/PLASTIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005884 all species →	Cellular Component	actin filament	Interproscan
GO:0032432 all species →	Cellular Component	actin filament bundle	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0051017 all species →	Biological Process	actin filament bundle assembly	Interproscan
GO:0051639 all species →	Biological Process	actin filament network formation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000017258.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.