Gene detail

Detailed information of ENSJQFP00000017346.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Ubiquitin family	ULD\|UFD\|UBX · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14555 all species →	UBA_4	UBA-like domain	Domain	Interproscan
PF00789 all species →	UBX	UBX domain	Domain	Interproscan
PF08059 all species →	SEP	SEP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012989 all species →	Domain	SEP domain	Interproscan
IPR001012 all species →	Domain	UBX domain	Interproscan
IPR036241 all species →	Homologous_superfamily	NSFL1 cofactor p47, SEP domain superfamily	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23333 all species →	UBX DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000045 all species →	Biological Process	autophagosome assembly	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0007030 all species →	Biological Process	Golgi organization	Interproscan
GO:0031468 all species →	Biological Process	nuclear membrane reassembly	Interproscan
GO:0043130 all species →	Molecular Function	ubiquitin binding	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0061025 all species →	Biological Process	membrane fusion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000017346.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.