Gene detail

Detailed information of ENSJQFP00000017549.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000018236

TTCCCACTAAAATCCTCTTCGGACCGGGGCCGTCGAATCCGTCAATGAGGATTTATAACGCGTCGGCGATGCCACTTTTAGGCCACATGCAATCCGATTTTTTCCAAGTAATGGACGAAACCAAAGCAGGTCTTCAATACGTGTTTCAAACCAACAATGACTATACATTAGCGATCAGTGGAGCAGGGCATGCCGCCATGGAAGCTTCCATCATGAATTTAGTTGAACGAGGAGAAACTATTTTGGTGTGTGTAAATGGTATGTGGGGTTCCAGAGCGCGCGAGATGGCTGAACGTCAAGGTTGTGATGTAAGGGTTCTTGAAAAACAGCCTGGAGAATATTTTACTCTTCCTGAAATTGAACAgAGCCTCAAAGTTCACAAGCCGGTCGTCCTGTTCCTTATCCACAGTGAGTCGTCATCTGGAATTTGTCAGCCCCTGGAGGGTGTTGGACGCTTGTGTCATAAGCACAATTGTCTGGTAGTAGTTGACACTGTAGCATCCCTTGGTGGAACACCATTCTTCACTGATGACTGGGATTTGGATGTAGTCTACAGTGGTTCCCAGAAGTGTCTTGGTGCACCACCTGGTGTATCACCCATCACATTTAGCCCCCGAGCCATGGCCAAGGTTAACAGCCGTAAAACTAAAGTTCCATCATTTTATCTAGACATCAATGAACTTGGAAACTATTGGGGTTGTGATAGTAGCCCAAGAAGGTATCATCACACTGCAGCTGTTAATCTGATTTATGCATTGAGAGAAAGCCTGGCCATACTCTCTGAAGAGGGCCTTGAAAATTCATGGCAGCGACATAAGGACACCATTGAGCATCTCTGGGCGGGACTAGAAAACATGGGTTTAGAGATGCTTGTGCCAGACAAGGCACATCGGCTACCAACAGTAACAAGCATCCGTATTCCTGATGGATTCCCTGACTGGAAAGGTGTCCCAGAATATCTGATGCAAaaGTATAAACTTGAAATTGTTGGAGGAATGGGCCCAACTGTTGGAAAGGTCTGGCGTGTCGGCTTCATGGGACATAACTCTTACCCTGAAAACGTGGATCTGTTTTTGCGACTGTTCAGTGAAGCATTAGATGCTGTGCGTGCCCGTGCAAAGGTCAAGCTTTAGAAGAACTGCAATTCTTAAATGCTTTTCTCCTAACTAAAAGGGAACTTTTAAGAccattttaaattgtttttttaagttCGCTATTGTTGGTTTGTAGCTTCTCTTTAagagtgtttgttttttgtcattttttccCGGGAGAAGAACCACATATTTCATAATATTTCTCCATGCTACTGGCTGAGAAATGTGTTAATTTTAACTGGCTAAATGATAAAAGCTTTATATCATCCAAATTAAAAATACGAACATGTCAAAAGAAACATGGCGTTACGAACAATTTCCAAGCCTTGTGGTTTAAACAAACCGTTCCATGCTATCTAAAGTAAATTTttaaccataaggtcgataaagtaaattagccatcgtaaaagattcgagcttgagcccttcgtcggagtgaatccgtTCTATGCTATCTACAATTTATATAACTATTATGGACAAATTTGAAATGCTATTTGAGTTAAGAGTGTTTGACTAACACTCCAATTGAAACCACAGAAACCGAAAAGTGTACTGTATTTATCATGAGACATTCTTTGATCAAAAAATTTATTGGGGCGAGCTTTCGAAGGTCAGACTACAAGCTTCAActggttgacagtagagtgggaaaaaaataataatacaaaaactagaacgcGGTGATTAGATATATACTTTTTGTCAGAGAACGTTTTTTTTATCGCCATGAGCAATACTGGTGGAACTGGGCCAATATTTCCCCAATACGGACCTCTTCCTGGTTTAGTAATGTAATAGTCCACTGCGCATCGGTGGTTACGGGTTCATAAAAAAAGTAAGTTGTAAGCTTGTTATCTCGTAGTAGACAAAATATGGCATATTTTTGTTTATATGGAATTGTCATTAGAGTAAGAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00266 all species →	Aminotran_5	Aminotransferase class-V	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR000192 all species →	Domain	Aminotransferase class V domain	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR024169 all species →	Family	Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase	Interproscan
IPR020578 all species →	Binding_site	Aminotransferase class-V, pyridoxal-phosphate binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21152 all species →	AMINOTRANSFERASE CLASS V	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004760 all species →	Molecular Function	L-serine-pyruvate transaminase activity	Interproscan
GO:0005777 all species →	Cellular Component	peroxisome	Interproscan
GO:0008453 all species →	Molecular Function	alanine-glyoxylate transaminase activity	Interproscan
GO:0019265 all species →	Biological Process	glycine biosynthetic process, by transamination of glyoxylate	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00830	AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase	EC:2.6.1.44 EC:2.6.1.45 EC:2.6.1.51	Amino acid related enzymes	ko01007	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.