Gene detail

Detailed information of ENSJQFP00000018018.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000018705

ATGTGTCATCGGTTTTATGAGAGCAGACCATCGGAAGGATGTGAGAGGTACCAAGTGCCAGTGTGGAGCTGGACCTGGGGAGATCCGCACTTTGTTACTTTGGATAACAAAAACTACACTTTTAATGGACTTGGTGAATTTGTAATGGTCGATGTGGAGGACGGGCTATTCCAGCTGCAAGCACGTACAAAACTGGCTAAAGGAGATGGCACCGCCACGGTTTTCTCCGAGATAGCAGCAACGGAAAAAAACACTAGCATTGTTCAAGTTGGCCTCAACAGCGAGGGCAAGCTGCGATTGCTGGTAGATGGAAAGCTTTTTGATGGTTTTGCAAACTTGACAAACACAAGCATAACCCTCAATGGTTCAGTGGCGGTGTCACGCCCGAGGAACGACTCCTTTGTTGCCACATTTCCGTCGGGGATATCGGTGAGAGTCAGAGAGGCAGTAGGATCCTTGTCAATAATATTCGCTGCACCTGTAGCATTCAAGGGCAAAACCAAAGGGCTTCTAGGCACATGGAACGATGACACTCTAGATGATTTCCTGAGACCTGATGGAGCTATTCTACCGCCCAACGCAACCGGCAGACAAATCCATTTTTCTTTTGGATTGCTTTgGAACGTAACCTCCGAGACAAGTTTGTTTACTAATATACCTGGAGAAAATGTTTCCTCGTTCTCGAACTATTCATTTGTTCCAACGTTTTTGGATGAGTTTCAGTTTGAGAGCGACGACCTCCAAGAGGAAGCTGAAAGAGTCTGTGACGGGGACGTAGCGTGTTTGTTTGACACTGCGTCCACTAAGGACGTATCAATCGGAGCAAGTTCTAAGGAAGTGTCCATACAAGTGGAAAGCGATTCCGAAGATCTCCAAAATTTCCCACCAAGGATTATTATTGGCCCTCCAGTAGTTAATCTCACTGTGAACACAACATCAACTGTAACAGTAACGGCAGAGGATCCGAACGGCGATGAAATGACATTCCGCGTGACTGGAATGCTGCCGACAGGTGCTCAGGTCTCGTCCAACACTACATCCGTCACGATATCTTGGAGCGTGACAACTGACAAGATTGACTTGGAATTTGTAGTAACTGACAGAAAAGGAGCTGCCTCAATACTGCGACCAGACATTAACGTCTGCGCATGTCATAACCAAGGAACCTGTGTCGCCTCTGCCGACGGTGAAGATTCCGAAAACAGCATTGACGAGGACGAGGACAGGTTTCAAATTCTTCCTTGCGTTTGTAAGGATGGCTATACGGGTTCATTTTGTCAAGACGATCTGGATGCGTGCGCGGTGGATTTCCAACCGTGTTATCCTGGGGTCGACTGTACTGATCTGCCACCGCCGGCAAACATATCCGGCTTTCAATGCGGTCCTTGTCCGGATGGTTTTACAGGAGATGGGCAGAACTGTCAAGATATGGACGAGTGTTCTGCAAGTAATGGCTGCAGCCAACAGTGTATCAACACTCCTGGATCATTTGTATGTGTTTGTAACAGTGGATATATCCTCAACGAGGACCAAAAAACTTGTGATGACGTAGATGAGTGTTCGCCGGTAAGCGATTGTGCTCAGGCATGTATGAACTTTCCTGGTGGCTACAACTGCTCGTGTAATGAAGACTTTAAGGTCGATCCGACAAATCCGAAGAACTGTATTCCCAAGAACCCATGTCAGCAAAATCAGACCGGCTGCGACCACATCTGCTTTTCCTCTGGACAGGAAGAGAAGTGCGATTGCTTTGCTGGATTTTCGCTACTGGAAGATGGAAAATCATGCGCAGATATTGATGAATGCAAGCCGAACAAGAGTCGCTGCAACCAAGATTGCAGCAATACGATAGGAGGTTATTACTGCTCATGCGAGGATGGTTTTGTTCTGGGCTCGGACAATTTCACTTGTATTGATGTGAACGAGTGCATTGAATGGATCTTCAACTGTCCAGATGACTCTATGTCATGTCAAAACACCCCAGGAAGCTACAATTGCGTTTGTGAGGAAGGATTTGAGTTGATTAACAACACCTGTAAA

Transcript

ENSJQFT00000018705

ACAACACGTCTTGGCCTAGCGATAGCTGGGGAGCACTCATTGTTGGCTCAGGAGGGGGAGCAATAGACAACTACCACAAACTGACGGAGCACCTAAAGGAGCAGCACGAAGCAAACGATGTCAACGGATTTCAGTACTGCTGTGTTGCGTCGAGGATGTGTCATCGGTTTTATGAGAGCAGACCATCGGAAGGATGTGAGAGGTACCAAGTGCCAGTGTGGAGCTGGACCTGGGGAGATCCGCACTTTGTTACTTTGGATAACAAAAACTACACTTTTAATGGACTTGGTGAATTTGTAATGGTCGATGTGGAGGACGGGCTATTCCAGCTGCAAGCACGTACAAAACTGGCTAAAGGAGATGGCACCGCCACGGTTTTCTCCGAGATAGCAGCAACGGAAAAAAACACTAGCATTGTTCAAGTTGGCCTCAACAGCGAGGGCAAGCTGCGATTGCTGGTAGATGGAAAGCTTTTTGATGGTTTTGCAAACTTGACAAACACAAGCATAACCCTCAATGGTTCAGTGGCGGTGTCACGCCCGAGGAACGACTCCTTTGTTGCCACATTTCCGTCGGGGATATCGGTGAGAGTCAGAGAGGCAGTAGGATCCTTGTCAATAATATTCGCTGCACCTGTAGCATTCAAGGGCAAAACCAAAGGGCTTCTAGGCACATGGAACGATGACACTCTAGATGATTTCCTGAGACCTGATGGAGCTATTCTACCGCCCAACGCAACCGGCAGACAAATCCATTTTTCTTTTGGATTGCTTTgGAACGTAACCTCCGAGACAAGTTTGTTTACTAATATACCTGGAGAAAATGTTTCCTCGTTCTCGAACTATTCATTTGTTCCAACGTTTTTGGATGAGTTTCAGTTTGAGAGCGACGACCTCCAAGAGGAAGCTGAAAGAGTCTGTGACGGGGACGTAGCGTGTTTGTTTGACACTGCGTCCACTAAGGACGTATCAATCGGAGCAAGTTCTAAGGAAGTGTCCATACAAGTGGAAAGCGATTCCGAAGATCTCCAAAATTTCCCACCAAGGATTATTATTGGCCCTCCAGTAGTTAATCTCACTGTGAACACAACATCAACTGTAACAGTAACGGCAGAGGATCCGAACGGCGATGAAATGACATTCCGCGTGACTGGAATGCTGCCGACAGGTGCTCAGGTCTCGTCCAACACTACATCCGTCACGATATCTTGGAGCGTGACAACTGACAAGATTGACTTGGAATTTGTAGTAACTGACAGAAAAGGAGCTGCCTCAATACTGCGACCAGACATTAACGTCTGCGCATGTCATAACCAAGGAACCTGTGTCGCCTCTGCCGACGGTGAAGATTCCGAAAACAGCATTGACGAGGACGAGGACAGGTTTCAAATTCTTCCTTGCGTTTGTAAGGATGGCTATACGGGTTCATTTTGTCAAGACGATCTGGATGCGTGCGCGGTGGATTTCCAACCGTGTTATCCTGGGGTCGACTGTACTGATCTGCCACCGCCGGCAAACATATCCGGCTTTCAATGCGGTCCTTGTCCGGATGGTTTTACAGGAGATGGGCAGAACTGTCAAGATATGGACGAGTGTTCTGCAAGTAATGGCTGCAGCCAACAGTGTATCAACACTCCTGGATCATTTGTATGTGTTTGTAACAGTGGATATATCCTCAACGAGGACCAAAAAACTTGTGATGACGTAGATGAGTGTTCGCCGGTAAGCGATTGTGCTCAGGCATGTATGAACTTTCCTGGTGGCTACAACTGCTCGTGTAATGAAGACTTTAAGGTCGATCCGACAAATCCGAAGAACTGTATTCCCAAGAACCCATGTCAGCAAAATCAGACCGGCTGCGACCACATCTGCTTTTCCTCTGGACAGGAAGAGAAGTGCGATTGCTTTGCTGGATTTTCGCTACTGGAAGATGGAAAATCATGCGCAGATATTGATGAATGCAAGCCGAACAAGAGTCGCTGCAACCAAGATTGCAGCAATACGATAGGAGGTTATTACTGCTCATGCGAGGATGGTTTTGTTCTGGGCTCGGACAATTTCACTTGTATTGATGTGAACGAGTGCATTGAATGGATCTTCAACTGTCCAGATGACTCTATGTCATGTCAAAACACCCCAGGAAGCTACAATTGCGTTTGTGAGGAAGGATTTGAGTTGATTAACAACACCTGTAAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12662 all species →	cEGF	Complement Clr-like EGF-like	Domain	Interproscan
PF00094 all species →	VWD	von Willebrand factor type D domain	Domain	Interproscan
PF07645 all species →	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR026823 all species →	Domain	Complement Clr-like EGF domain	Interproscan
IPR001846 all species →	Domain	von Willebrand factor, type D domain	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR049883 all species →	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR051495 all species →	Family	Epithelial Barrier and Cell Signaling Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13802 all species →	MUCIN 4-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005176 all species →	Molecular Function	ErbB-2 class receptor binding	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0010469 all species →	Biological Process	regulation of signaling receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000018018.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.