Gene detail

Detailed information of ENSJQFP00000018044.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation ROSCU · all data for this species · gene families

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21103 all species →	PH1_SSRP1-like	SSRP1 PH domain	Domain	Interproscan
PF08512 all species →	Rttp106-like_middle	Histone chaperone Rttp106-like, middle domain	Domain	Interproscan
PF00505 all species →	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048993 all species →	Domain	FACT complex subunit SSRP1-like, first PH domain	Interproscan
IPR013719 all species →	Domain	Histone chaperone RTT106/FACT complex subunit SPT16-like, middle domain	Interproscan
IPR000969 all species →	Family	FACT complex subunit SSRP1/POB3	Interproscan
IPR009071 all species →	Domain	High mobility group box domain	Interproscan
IPR036910 all species →	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR050454 all species →	Family	RTT106/SSRP1 Histone Chaperone/FACT Complex	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45849 all species →	FACT COMPLEX SUBUNIT SSRP1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0031491 all species →	Molecular Function	nucleosome binding	Interproscan
GO:0035101 all species →	Cellular Component	FACT complex	Interproscan
GO:0042393 all species →	Molecular Function	histone binding	Interproscan
GO:1902275 all species →	Biological Process	regulation of chromatin organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000018044.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.