Gene detail

Detailed information of ENSJQFP00000019007.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation ROSCU · all data for this species · gene families

Sequence

CDS

ENSJQFT00000019699

ATGGTTGAAGCGATTAAGGACGGTGATAGAACAAGCGGCAAGCGTATTTTCCAGACACTTCCCAGGCACATGCGAAGAAGAGCAATGAGTCACAATGTCAAAAGGATGCCTGTTCGTCTCCGTCAACGAGCATCACACGAGATGAAGAATGCATCTAGCCACCCTGAAGTCCCCAAAAAGAAAAGCAGGCACCAACGCCGTCAACCCAAGAACTTGCTTGAGGAGTACAGCCGTCGACAACGGAAACACATATGGCTTGAAACACATATTTGGCATGCCAAGAGAATGAAAATGATTGATGCATGGGGATACAGATTAGCAGAGCACCCCAATGATAAAGGATTCAGAGCTGCTTATAGAGCTACAAAAAACAGCAGTTTATTGCAGGACATTTCATACTATGGCTGTATGGAAGTTAGTGGCGTTCAAAGTCTTATCGTAGAGGCCATGAGTCATTTGACAACTCAAGAGGCAGGTCTCAGTATGGCAGCAAAAGTTTACATAGATGGCTCCAAAGAAGGGCATATCATTCTGTACAAGATGGATCAGTATCCTCTGGGGGCAATTGGCCCAGTGTCTTTCCTTTGGAGACCAAAAGGGAGGATGGACAGTGCAACTAACAAAAGCAATGTATGGCTGTTAGAATCGTCTAGAACAGGCGTGGGTATTGTTGATGAAATAGCCCAAGTGgacagtgaaaagaaattgttcAGTGACAAAGAAGTTATGGAGAGTTGCGCCAAGGAGTGCCACGCAATTCTGGATAAGGATTCAGATTCACAGTTGTGGATTTGGTCTCATCCTGCATGTTATCACTCTGTTTTCAGCGAAGTTGTAGCGGCTTGTAAATGTGTGGGGCCTACTTCGGTGAGAGATGATGCTCCGCGCGACTCTTCAGTTGATCGTGGAAGTGAACAAGATGCAAGAACCCTCCCGCTTGTTAACGGCCACAGTGTTGTTTCTGACACCTCAGGGTTAACAGTGACTTGTCGCAGGTTTGATTTGCTTCGTTTTCGCCTCACTGGGCCCCAGTCACATGCTGTACTCGCTGCCACACTCCAAATACCTCATGATTGGAGACAGACAGGTGTCAATAATGATGGTGAACATAACAAATGTGATAGCAATTTCAAGCACAATGAAAATGATAAATGTCTTTCAAAATGGTGGCAAGATGTCTCGAACAGCAAAAGTAACCTGATCTGGGACAGTTTTAAAAAGATGTGGTCTCCATCTGTTTTCCCCCCAGGGTGTGTCATTGGGCTCTGTGTGCTTGACCCTCGATTGAATCTGCCTGGCAAAAAACAAAGCACAAGTAGCATTGCAGAGGAGGTCAACTCAACTGGGCAAACTGAAACTGCTTGCGACTTTGGTTTCTTGATGACAAATGCAAATGGAGTTGGAAACGTTGCCAAGAAAAAAGTTCTTTCCTTTGAATCGGTCATATCCCAGTGGCCATCAAGTGTTGCCGACTCGGCCATCTGGGAGGAATCAATTCGCCGTGAGGTCAAACAATCGAAAATATCTGAACAAGAGTTGAACCGCAAGAGATCTGAGCTGCCAGTGCCAGGTTCACAGTTGAATCTTAGCGAAGAAGAGATTTCTCACATTCCCGTATTAGTTATTCAACTACCCGGATGCTCAGGTAACAGCAAAGACCCCGGAGCGAATCCTGGATATGGCAGTGGGTGGGACATCATTCTTCCCAGTGGATGGGCCATGGCCTTTTGGATTGCCTTCGTGTACCGAGGGGCTCGAGTAGGGGGACTGAAAGAAAGTCACACCTTAGCCCTTGAGCAGGGAGTACCTTTCTTTCCCAACGATTTCCCAGACACTCCTGCTGGAGAGTCGTACTGTGCAGAGTTGAAAGATGATGGCGAGGCAAAGTATGCTCGCTATCCACCAGCAAAAAGACCCAACTACCAAAAGTTAGGCGTAAAATCGCCATTCAGTCCCCCGTGGAAACAAATTGTTGAAGAGTGGAGCACGAGCGATGAGGTTTTCGGCAAAATGCAAACTTCACTCGAAGATGCGCATCTCAGTGCGCGAGAATCGCACAAGGGGCTTGGACGATCATTCTACGTGTTACGTTCTCGTTCTAGCTTATCCGTTCTCCGAAGGTGTTTTAAAATGCGTTGCGACAAACCTGGGATAAAAAGATTTAAGCAGCAAGCAACGTTGGATGAAATGCCAGCCCCCGTGGATGAGTTGTGGTCGATCGTTGGAAACAATCCCAGTTGTGTTGTCTTTGTTTCACTGCGCATGGCCAATCGGGGCATTCCTTTACCCAACTCATCTGTTTCAATACCTTCACGTGACGACGtcgaaaaactgaagaaatgcaAGGAGTACGTAGGACCTGTGGAATCCTTACACAAGGGTCGGCGGCCAGAGATGGACGAGAAATCACTGAAATGTTCTTGCCAAAGGGAGATTGTAGGATTTGTCTCCTCGGGACACTTTAGTTTGTCCCGCGGGTCCGGTTTTGCGGTTGGATTTTGTGCTCTTCCCGGTCTTGCAAAGATGTTGGCGTCGACAAGTTTTACTGGCGAAGCGGTCGTTTTGGTTCGCGGACCAGCCAGTCAACAATATAGATTTGCGTATTTATCCACTTTATAG

Transcript

ENSJQFT00000019699

GGAGGACAGCAGGAAATTAGCCGAAAACGAAAGAGAACGTTTCATCGAGAAATCCCAACGTCTACCCCTTCATTAACCTCCACTCCAGGAGTTGTGTCTCAAGCGCCTAGAGGTATAAATCCTGCTGAATTTGCCGAAGCGCGGGCGTTAGAAATTCAGAACATGGTTGAAGCGATTAAGGACGGTGATAGAACAAGCGGCAAGCGTATTTTCCAGACACTTCCCAGGCACATGCGAAGAAGAGCAATGAGTCACAATGTCAAAAGGATGCCTGTTCGTCTCCGTCAACGAGCATCACACGAGATGAAGAATGCATCTAGCCACCCTGAAGTCCCCAAAAAGAAAAGCAGGCACCAACGCCGTCAACCCAAGAACTTGCTTGAGGAGTACAGCCGTCGACAACGGAAACACATATGGCTTGAAACACATATTTGGCATGCCAAGAGAATGAAAATGATTGATGCATGGGGATACAGATTAGCAGAGCACCCCAATGATAAAGGATTCAGAGCTGCTTATAGAGCTACAAAAAACAGCAGTTTATTGCAGGACATTTCATACTATGGCTGTATGGAAGTTAGTGGCGTTCAAAGTCTTATCGTAGAGGCCATGAGTCATTTGACAACTCAAGAGGCAGGTCTCAGTATGGCAGCAAAAGTTTACATAGATGGCTCCAAAGAAGGGCATATCATTCTGTACAAGATGGATCAGTATCCTCTGGGGGCAATTGGCCCAGTGTCTTTCCTTTGGAGACCAAAAGGGAGGATGGACAGTGCAACTAACAAAAGCAATGTATGGCTGTTAGAATCGTCTAGAACAGGCGTGGGTATTGTTGATGAAATAGCCCAAGTGgacagtgaaaagaaattgttcAGTGACAAAGAAGTTATGGAGAGTTGCGCCAAGGAGTGCCACGCAATTCTGGATAAGGATTCAGATTCACAGTTGTGGATTTGGTCTCATCCTGCATGTTATCACTCTGTTTTCAGCGAAGTTGTAGCGGCTTGTAAATGTGTGGGGCCTACTTCGGTGAGAGATGATGCTCCGCGCGACTCTTCAGTTGATCGTGGAAGTGAACAAGATGCAAGAACCCTCCCGCTTGTTAACGGCCACAGTGTTGTTTCTGACACCTCAGGGTTAACAGTGACTTGTCGCAGGTTTGATTTGCTTCGTTTTCGCCTCACTGGGCCCCAGTCACATGCTGTACTCGCTGCCACACTCCAAATACCTCATGATTGGAGACAGACAGGTGTCAATAATGATGGTGAACATAACAAATGTGATAGCAATTTCAAGCACAATGAAAATGATAAATGTCTTTCAAAATGGTGGCAAGATGTCTCGAACAGCAAAAGTAACCTGATCTGGGACAGTTTTAAAAAGATGTGGTCTCCATCTGTTTTCCCCCCAGGGTGTGTCATTGGGCTCTGTGTGCTTGACCCTCGATTGAATCTGCCTGGCAAAAAACAAAGCACAAGTAGCATTGCAGAGGAGGTCAACTCAACTGGGCAAACTGAAACTGCTTGCGACTTTGGTTTCTTGATGACAAATGCAAATGGAGTTGGAAACGTTGCCAAGAAAAAAGTTCTTTCCTTTGAATCGGTCATATCCCAGTGGCCATCAAGTGTTGCCGACTCGGCCATCTGGGAGGAATCAATTCGCCGTGAGGTCAAACAATCGAAAATATCTGAACAAGAGTTGAACCGCAAGAGATCTGAGCTGCCAGTGCCAGGTTCACAGTTGAATCTTAGCGAAGAAGAGATTTCTCACATTCCCGTATTAGTTATTCAACTACCCGGATGCTCAGGTAACAGCAAAGACCCCGGAGCGAATCCTGGATATGGCAGTGGGTGGGACATCATTCTTCCCAGTGGATGGGCCATGGCCTTTTGGATTGCCTTCGTGTACCGAGGGGCTCGAGTAGGGGGACTGAAAGAAAGTCACACCTTAGCCCTTGAGCAGGGAGTACCTTTCTTTCCCAACGATTTCCCAGACACTCCTGCTGGAGAGTCGTACTGTGCAGAGTTGAAAGATGATGGCGAGGCAAAGTATGCTCGCTATCCACCAGCAAAAAGACCCAACTACCAAAAGTTAGGCGTAAAATCGCCATTCAGTCCCCCGTGGAAACAAATTGTTGAAGAGTGGAGCACGAGCGATGAGGTTTTCGGCAAAATGCAAACTTCACTCGAAGATGCGCATCTCAGTGCGCGAGAATCGCACAAGGGGCTTGGACGATCATTCTACGTGTTACGTTCTCGTTCTAGCTTATCCGTTCTCCGAAGGTGTTTTAAAATGCGTTGCGACAAACCTGGGATAAAAAGATTTAAGCAGCAAGCAACGTTGGATGAAATGCCAGCCCCCGTGGATGAGTTGTGGTCGATCGTTGGAAACAATCCCAGTTGTGTTGTCTTTGTTTCACTGCGCATGGCCAATCGGGGCATTCCTTTACCCAACTCATCTGTTTCAATACCTTCACGTGACGACGtcgaaaaactgaagaaatgcaAGGAGTACGTAGGACCTGTGGAATCCTTACACAAGGGTCGGCGGCCAGAGATGGACGAGAAATCACTGAAATGTTCTTGCCAAAGGGAGATTGTAGGATTTGTCTCCTCGGGACACTTTAGTTTGTCCCGCGGGTCCGGTTTTGCGGTTGGATTTTGTGCTCTTCCCGGTCTTGCAAAGATGTTGGCGTCGACAAGTTTTACTGGCGAAGCGGTCGTTTTGGTTCGCGGACCAGCCAGTCAACAATATAGATTTGCGTATTTATCCACTTTATAGTCTGGTAAATTATGACATAACCGACCGACTTGGTTATTTATGAATCTTTTACAACCTAGCTCAGGTGAGATCTGACTTCATTTTCCCTTGAGAAGGTACATTTCGTGTTAAAGTGAAAAAGGTACGAGAAATTACGTACCTCGGATTGTACAGCAAGGTTTTcgaaaaatgaaagaaagttgATAATTGGAATTTAAATGTCTATCGTGGAGTTCGGTGACAGCATCtaagaaataaaatacaaagAAGGCAAGTCGATGACTTTCCAAAAAGTGGTAACATCGCATGACTCATTCGGCAGAAAATAAGCTAAATTGTTGCACTTGGAATTTCACTTGTCAGTTGTTGGTTGGAATGAAATGATGGAACGGTTCCGTTTACTTTTTTCCCTTTCATGTGGAACGTGTCGTGTGGGCTAACCGCTTTGCAttctttattaaaattaatcttcGCTGCTGATACCTATACAGATTACTTCGTGGAGAGTGAAGGCGTACAGTTTCTTCACGGAAAACGGATAAGCGAGCGCGGAGAGCGAGTCCGTTTTTCGGTACTTGTCGTCTTGTGAATAAGTATCATACAAAGCAATTTCTGTGGTGTTAGTTATTTCAATGATACTCAGATTTATCGGCGAATTTTTGCTGAAGGAAAGTTAGGCTATTAGCAACGTAAGCCAAGTAGAGGTAAAAGAAAACGTACGTCGGATCAGCGACGCAAACGATGTAATTTCCAAGTGACGAATATCGTAAGGCTTTTATTCAATATAACGTGCGTAAATCTCGATACCTATGAAATAGGGTGATTTACTCGATGCATGTATAGAAAAACAAAGCACTGAAGAAAAACCGGGCCACAGTGTACGAAGGCGTAATTAAAAGGGGCATTGTCACCGATTTTAACAACGTTAAAAACTTGTGCACAAGTGGAAATCGAAAAAGAAGTAGCTCAGTATGACAGTAAGTAACATGTTAGTGTGATATGAAACTACTTACTGTTGTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08170 all species →	POPLD	POPLD (NUC188) domain	Domain	Interproscan
PF06978 all species →	POP1_N	Ribonucleases P/MRP protein subunit POP1, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039182 all species →	Family	Ribonucleases P/MRP protein subunit Pop1	Interproscan
IPR012590 all species →	Domain	POPLD domain	Interproscan
IPR009723 all species →	Domain	Pop1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22731 all species →	RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000172 all species →	Cellular Component	ribonuclease MRP complex	Interproscan
GO:0001682 all species →	Biological Process	tRNA 5'-leader removal	Interproscan
GO:0005655 all species →	Cellular Component	nucleolar ribonuclease P complex	Interproscan
GO:0008033 all species →	Biological Process	tRNA processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01164	POP1; ribonuclease P/MRP protein subunit POP1	EC:3.1.26.5	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.