Gene detail

Detailed information of ENSJQFP00000019841.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000020559

ATGGTGATGGAAAGCGACTCTTCAGGTGTCATCTGCGTTGTTTGTGGGAAACGTTTCAAGGACGGAAAGTTTATCTTAGCTCTCTGCAGCAAATGGCATACCGACTGCTTCAAATGTTCAGAATGTAAAAGGTCTCTGATATCCACTTATTATGCCCGTGGAAAGACTCTTTTCTGCAAAAGGGACTACACGGCGAGATTTAAATCGACGTGCCATGCCTGCGAACAGACGATCACAGGGCCAGTCATAGTTATAGGTGATCATAAATTTCATACAGAGTGTTTTTCCTGTGGAAGCTGTCAACGATTCCTAGGAGAAGAAGATGATTATGTTCTTTTGGAAAGGCACAGACTTATATGTTGTTCATGCTTCCACAAAGAGCTTAAACAACCATGGCAGAATCAATCTTTACACGCCATTCATCACTTCCATTTAACAAAAGAAGAAGCAGCTGCACTCAGACTTGAAGTGGACAATGTtgaagggaagagaaaaagACAAAACCAAGGTGGCACATCAATACTTGTCAAGAGGTCCAACCAATCCTTTCATCAGCCATCTGCAAGTTTTAGGTTCAGTATCATTGCTGGGGATACAGTGTTAGAAGTGAATAAACTTGTTGTGTCAGCAGGTAATATTGAAAAGGTTGTATCTGTGCTCACAAGTCAACCATCTCAGATTACAGAGTTGACAATTGAACGAAATCCTGCTTGGTTAGATAAACCTCAGCTGCAAAGGCAGCTGACCATAGATTCTGACAGTGATGATCCTGAGTCACCAACCAATAAAAACAGTTTTCGCGAGAggtcaatttcattgttttcaaaacgtGCTGTCAGCCGTAGCATCACAGAGTCTCAGACGGGTCAGAATGGGAAAGACTGTTCTCTCAATGTTGCTGATTGGAAAAAGAGCAAAAAGCCTGCTGTGCGGTCTAATTCACTACCTCGGAGTCAATCATTGCCAGCTGTGTCCACATACCATGCTCTTCACAGAGCACATTCATTTAAGGATGAAACTATAACCAACAGGGTCTTTAGGCCTTGTGACCTTCTGATAGGGGAAGTAATTGGAAGAGGCTTCTTTGGACAGGTTACAAAGGTTACTCACAGACAGACTGGAGAAGTGATGGTACTAAAGGAGCTCGTTCGGTACAATGAGGAAGCCAAAAGAAGCTTCTTAAAGGAGGTAGCGCTGTTGAAAAGCTTGGATCACCCCAATGTATTAAGGTTCATTGGAATTCTTTACAAAGACAAGACCTTGAACTTGATAACTGAGTATATTTCTGGAGGGACATTGCGGGGAACTCTTAAAGATCAGagTAAGCAATTGTCATGGGTGCAGAGAGTCAAGTTCTCCAAAGACATCGCGTCAGGAATGGCGTATCTCCATTCTATGAATGTGATGCACAGAGATTTAAACTCTAAGAATTGCTTGGTGGAAGCTGATAAGGATTCCGCAGGAATGTCAGTCGTGGTGGCTGACTTCGGCCTCGCTCGTGTGGTCAAACACCCACCCACGTCACCTTTATTAATGCCATCATCGTCGCCAGTTTCTCGCGAACCACCTCTGTCGCCAGGCACCAAGCCCCCTCTTCCAAAGAAAAGATATACTGTCGTTGGAACGCCATATTGGATGGCTCCTGAGATGATGAAAGGTTATACCTACAACGAAAAGGTTGATGTGTTTTCATTTGGGATTGTCACGTGTGAGATAATCGGGCGCGTGAAAGCCAACCCTGATTTTCTTCCTCGCACGTCGAACTTTGGCTTGGATGTGGAGAAATTCCGCAGAGAGTTTTGTAAAGATTGCCCAGAGCTGTTTTTCCAAATAGCTGTAATGTGTTGCGATTTGGACTCTGATAAAAGGCCTGACTTCAGTGTGTTGGAGAAGTGGCTTGAATCTCTTCTGCTTTACCTTGATGTCGGCCTCTTACTACCGACAGACATGAAATTCTCCCTCCTTCCTGGCACCTTAATGCGGAAGATCAGCGAGTCAAGCGAAGGCGACTCGGAAACTTGA

Transcript

ENSJQFT00000020559

GGTGTTTACTATGAGGAATGGTGTATAAAAATGTTCGATGGTGATGGAAAGCGACTCTTCAGGTGTCATCTGCGTTGTTTGTGGGAAACGTTTCAAGGACGGAAAGTTTATCTTAGCTCTCTGCAGCAAATGGCATACCGACTGCTTCAAATGTTCAGAATGTAAAAGGTCTCTGATATCCACTTATTATGCCCGTGGAAAGACTCTTTTCTGCAAAAGGGACTACACGGCGAGATTTAAATCGACGTGCCATGCCTGCGAACAGACGATCACAGGGCCAGTCATAGTTATAGGTGATCATAAATTTCATACAGAGTGTTTTTCCTGTGGAAGCTGTCAACGATTCCTAGGAGAAGAAGATGATTATGTTCTTTTGGAAAGGCACAGACTTATATGTTGTTCATGCTTCCACAAAGAGCTTAAACAACCATGGCAGAATCAATCTTTACACGCCATTCATCACTTCCATTTAACAAAAGAAGAAGCAGCTGCACTCAGACTTGAAGTGGACAATGTtgaagggaagagaaaaagACAAAACCAAGGTGGCACATCAATACTTGTCAAGAGGTCCAACCAATCCTTTCATCAGCCATCTGCAAGTTTTAGGTTCAGTATCATTGCTGGGGATACAGTGTTAGAAGTGAATAAACTTGTTGTGTCAGCAGGTAATATTGAAAAGGTTGTATCTGTGCTCACAAGTCAACCATCTCAGATTACAGAGTTGACAATTGAACGAAATCCTGCTTGGTTAGATAAACCTCAGCTGCAAAGGCAGCTGACCATAGATTCTGACAGTGATGATCCTGAGTCACCAACCAATAAAAACAGTTTTCGCGAGAggtcaatttcattgttttcaaaacgtGCTGTCAGCCGTAGCATCACAGAGTCTCAGACGGGTCAGAATGGGAAAGACTGTTCTCTCAATGTTGCTGATTGGAAAAAGAGCAAAAAGCCTGCTGTGCGGTCTAATTCACTACCTCGGAGTCAATCATTGCCAGCTGTGTCCACATACCATGCTCTTCACAGAGCACATTCATTTAAGGATGAAACTATAACCAACAGGGTCTTTAGGCCTTGTGACCTTCTGATAGGGGAAGTAATTGGAAGAGGCTTCTTTGGACAGGTTACAAAGGTTACTCACAGACAGACTGGAGAAGTGATGGTACTAAAGGAGCTCGTTCGGTACAATGAGGAAGCCAAAAGAAGCTTCTTAAAGGAGGTAGCGCTGTTGAAAAGCTTGGATCACCCCAATGTATTAAGGTTCATTGGAATTCTTTACAAAGACAAGACCTTGAACTTGATAACTGAGTATATTTCTGGAGGGACATTGCGGGGAACTCTTAAAGATCAGagTAAGCAATTGTCATGGGTGCAGAGAGTCAAGTTCTCCAAAGACATCGCGTCAGGAATGGCGTATCTCCATTCTATGAATGTGATGCACAGAGATTTAAACTCTAAGAATTGCTTGGTGGAAGCTGATAAGGATTCCGCAGGAATGTCAGTCGTGGTGGCTGACTTCGGCCTCGCTCGTGTGGTCAAACACCCACCCACGTCACCTTTATTAATGCCATCATCGTCGCCAGTTTCTCGCGAACCACCTCTGTCGCCAGGCACCAAGCCCCCTCTTCCAAAGAAAAGATATACTGTCGTTGGAACGCCATATTGGATGGCTCCTGAGATGATGAAAGGTTATACCTACAACGAAAAGGTTGATGTGTTTTCATTTGGGATTGTCACGTGTGAGATAATCGGGCGCGTGAAAGCCAACCCTGATTTTCTTCCTCGCACGTCGAACTTTGGCTTGGATGTGGAGAAATTCCGCAGAGAGTTTTGTAAAGATTGCCCAGAGCTGTTTTTCCAAATAGCTGTAATGTGTTGCGATTTGGACTCTGATAAAAGGCCTGACTTCAGTGTGTTGGAGAAGTGGCTTGAATCTCTTCTGCTTTACCTTGATGTCGGCCTCTTACTACCGACAGACATGAAATTCTCCCTCCTTCCTGGCACCTTAATGCGGAAGATCAGCGAGTCAAGCGAAGGCGACTCGGAAACTTGAGGAATACAATACAATATTTAAGCACCAATATTTCTCCTACATGCTCACGCACAACACACGGAGATCTCGTACGTTTTGGCGTTTCCTCGTATCCATGCAGGTTTGGATGACCTTTAAACGTCTCATCGGTTTTCGTCGATCTACAAATGGAATTCGGGAAAATACTCGAAACAGGTTCTTATATCCACGCGTGAAATGTAGATCCTTCTGGTGGCTGGGCCACTGTCTGAAGTTCATTAACCAGTATAGCTGTATATTTTTTGATTTAATAACTGGAAACGACGGAGTAATGTCAAACTGTAAAACAGTAAAATTTATTCCTTGGCAATCACAGTGTCTTGAGTGGGCCTCTTTGTAACTTTTTCATTGCGCATAGTGAACAAGGGAGTCACTTTTGCATCGGTGAACAAAACCATGCGCCCTTCATTCTTTGGAAGCTTATAGCTTGTGGGCCTAATTGGTTTTTCATGCGGTGTGGTTAAAACCAGTCGATCAAGCAGCGCAGTGTGACCATCGTTTGAAaagccacttaaccctttaagccctagtatcaaattacaaattctccttttgtgtttccatacttttcatacaaaagtagtggggagaagctgttaaaatatcaatagacttgaacttgagtgatcatgttctcaattctcatgacctcactagctgataaacccttgatattgcaatgagaagtttgactcagatcgttgttaggccttaaagggttaacagcactTTAGTCTGGtgttgtaatacagtgtggttctaagtttcAATCTGTGGATTATTCTatgcactgtgaccattctttggaaagctattagatattagtat

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF00412 all species →	LIM	LIM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR001781 all species →	Domain	Zinc finger, LIM-type	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR050940 all species →	Family	Actin-regulating Serine/Threonine Kinase	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46485 all species →	LIM DOMAIN KINASE 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0030036 all species →	Biological Process	actin cytoskeleton organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05744	LIMK2; LIM domain kinase 2	EC:2.7.11.1	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.