Gene detail

Detailed information of ENSJQFP00000020133.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000020872

ATGGCGACCTCGTTAGGTGCGGAGTTAGAAGACAGTTTATCGGCTGCTCTTGAAATATCAAAAGAGGTCATAACCCAAGTTGCTAGTTTGAGTGAAGATGCGACTACCGTACTACGCAAATGTAATGATGCTTTTGATAAGCATACTTCCCAAGAGGCCAAATGGCGCTCAGATCTTGCAACACTTCGAAGGGCACGTGTGAACTCAGAGCAACAGTTCAACCAGGTTGAAAAGCAGCTAATCTCATGCAATGCCAAGCTTGAATCGGAGATAAAACAGCACCAAAGACTTCAGAAAGAATATGAACAAAcagCTGCATCCcttgaagaaaaacagaaaagacTGAAGGAAGTGGAAGGTATCAAAGAAGATGCATCTACAAATTATACAAGAGTGTCTAGGCTCAACGAGCAGTTAGAGTCGGAGAAACTGGAGCTGCTATCTGTTGTCGAAAGGAAAAATCAAGAGATTGACAGATTGAATGAGGAATGGAAAACTATGTCTGAGAAGCTGTCTGCTGCAAATGCTACTAAATGTGAAGCTCAGGCTAAGCTGGATGAGATTGAGAACCAAGAAACTTCATTTAAGTTTCGTGAAAAGAGATTAGAGCAAGAAAGGCAATTGATGAAAAAAGAGAATGAGTGGCTGAATGAAGAATTGAAGAAGAGAACAGTGGAGTTGGTCAAACTCAGGAAAGAAAAGTCTTCTCAAGTTCTGCAGCTTCAAAGCCAGTTGGACGAGAGCAATGAAGAGAGGAGCTGCAGATTGAGGATCAAGGCTGTTACCAGTACATTTTTATCATCTGGATCTGTTGTGACAACTTTTTTCATTTATCAGGCTCGTGAACAGTTTGTGAAGATGGAGGACCACTATAAAATGGAACTGGGTTCTCAATCTAAGCTTGCAGTCCTCTATAAGGTACAGAATACTGATGACATAGCCTGTTTACTCATTTGTTGCTCTTGTGTCATTTTTCTAGGCCGTCTTGATCTTGACAGTAAATTGAAGGAACAGGAGGCATTCCATTCTGGGAAAGCAAAAGAATTTGAAGAGAGGATTGATAAACTGGAAAAGAAACTTGAGAATGCCAATGATTTACTGGCTGCAGCACGCCAAAGAGGAGCAGCCCCTCTGACACCAGTGGAACTAAGCACCCTGTCTCCcactgcagcagcaacaagctCATTTTTAAAGTCAGGAATGACTCTTACTCAGATTTATAGTCAATATGTGGAAGTTTCTGATGCGTTGCAGCAGGAGAAGGATGAGAATACAAGACTGAAGCAGTATCTGGATCAAATACTCAAGGAAATTGAAGAGAAGGCTCCAGTCCTCCAACAACAAAGGCGTGACTATGAGCAAGCATTGCACAGCGTCGATCAGCTTTCAAGGAGGCTAGATGTTGCTCTTGTGGAAAATGAAGAATCTAAAGCATTTACTGATGAGGCCTTGAAGAAAAGTGAACACCTGAGAAGGGAAAATGAGAGGCTAAGGAATCTATCTGCTGATCTCAGTCAACAGGTCCAAGTCCTTCTAAAAGAATGCGAAGAGGCAAGGGGAGGTGTAGTCAGTTCAGAGGCCAGCACATTTCCCATGTCCAGTACAGAGGTGACCAGTTCGTCGCAAGTTATCTCTGAACACCTGGTTACATTCAGGAATATTGAGGAATTGCAGCAACAAAATCAGAAGCTACTTAAAGTGGTCAGAGAACTAAGCGAGGAGAAGGAGAAAAAAGAGGGAGATGGGGTTGAAGCAGTTATAAGACAGCGTGACATGTACCGTGTTCTGTTAGCAAGCACTGGACAAACACCAattcCCACATCCGATATTGACACATCAATGCTGGTGTCTACTCCTTTGCCAAAGAGTCTTGACAAATCACAAGCCGAACTGGAAGAAACCAAAGTGGCATTAAAGGAACTTCAAAGACACTTTGAGAGTTACAAAACAGACAGGACACAGAGCGAACACTTAAACTTATACATCAACCTAGCACGCGCATATACACTAAGGAGACCTCTCCAGTACCAACCACTGCATTGTTCTCTTCAGCTGGAATTTGCTGAGGAGAAGTACAAGATCCTGAAGTCAAATTGCGAGGCCTTCAAGAAAGAAGCCACTGCAGCGTCAGAAAAGGCTCAGAAATTACAGGTTGCTTACAGCAAGGTGCAACTGTCTCTTGATAGTGTGTCACAGGAGCTTACCAATACAAAAGAGCAATCCAACAAACTTGAGGTGATGTGTGAAAACCTTCGAGCTGAGAAGGCGTTGTTGAAAGAGTCTGAAGTAAGACTAATACAAGAGAATAAGAGTTTACTTGAACACCAGAAGTCGCAGAATGCTGTGGTCACAAACCTTCAGACGTTACAGAATAACTTGGAGCGGTCAGAGTTTGAGGCCCGGACAAGACTGGGGTCTCAAGTTGAGAGCTTACAGAGAGAGTTGAATCTACTGAGAAGAAAACTGGAAtctgaagaaaaacaccacaAATGTGTTGTGAGCACATGGGAGAACCGAGTTCAAGAGCTGCAGTCACAGTTGAATGTGGAGATCAAGACACATCAACAGGCCAGGGAACAACTATTGACGTCCACTAAAGACATTGATGCAGTCCAGCTTAGAtGCTCGCAAGCTGAAGCTCAACTTCAGGTCTGTGAAAAGCGTGTTGAGGAACTCTTGAACAGAGATGAAGGTACTCTTCAAGAAGCTGACCAAGAGAGGATCAAAAAGGAAATAACAGAACAGTATGCTGTCAAGATACAGGAGTATGAGCTGAAATTAAATGACGCAGAGGCACATGTGAAAACTCTTGAAGAACAGTTGCAGCAAGCAAAGCAACATGTGGAACAGTTCAGATCCATGTCCGAGGCCAATGAACAAGCACTGAGCGACTTAAACAAGGTTAGTGAAGAGTTCAAGAAGACAACAGAGACCAAGCTTAAAACTTCCGAGCAGGAGGTAACAGAACTCAAGACTCGTGTGTCTCATTTGCAATCACAAAACCAAACTCTTAGTGCCAGCAAAGCCAAGATCACAAGAGAAACAGAGTCACAGACCAAACATTTAAGGGAGACTCTTGGTAGGGTGCAGGCAGAGCTAGCAGAGGCATTAAGGAAGGCCCAGGCATCCGCTGCTGCAGAGATGGAGGCTAAAGAAGAGCTGAAAGAGCAGGCACAGCTGTCCGCCGAGGCACAGGATAAATATGAAAGAGAGCTGGTTCTTCATGCTAATGATGTGCAAGCTCTGACGCTGGCCAAGGAAAAATTTCAAGAACAGAGCACAAAATTCAGTGAAATGGAAGAGCGTGCCGTGACAGCTGAACAGAAGTTACAGGAGTACAAGACGTCTTGGGAGGAGCAGAAAAAGGCGAAATCCTTGGAGGCGAAGAAACTAGAAGCCCGCTATGCCGACTTGGTCAATCAAAATTCAATGCTGCATAGTCAGCTAGAGAAGCTTAGTGGCCAACTGGCTGCCGGCAAGGATTCATCTCTAGCCCTCCCAGTACCATCGAAGGAGGTCGGCGAGATAGAGGGGACTGGTGACAACAATAAGACCATGGAGGAACTCTGGGAAATTATCAGGTTTCTTTCACAGTCGGAAAGCATTCGATACCAGCAACGCTGTGAGTACCTGGAAAGTCAGATTGAAGATATGCAAAAGAACTTGACAGAACAGAGGTGCCAGTCAGCCACGGAAACACAGACAGCAGCAGAGCATGCAGACATCATGGCCAAAGTGAAGAAACTGAATGAGCTCGcggaaagaaataaaatattggcCGACGAAAAGGACAGAGCAGAACAGAAATCCAGGCTACTGGAAACAAAGGTCCAGAAGCTTGAAGGGGACATCAGGCCTTTGAAGGATAGCAATCAGTCTTTGGCTTCAATGAAAGATGCATTATTAGCTGAAAAAACTGCGCTCAAGAATGAGATCATTCGCTGGACAGCAAAAACCAATCAGTTGATAGAACAGTACAAGAATGTCGATGCCGAGGAGTACAAGAGAATGTCAGAGGAGAAGAAGCAGTTCCAACAACAGATATCAACTCTGAAAAGTGATAATCAAAGGATGAAAACCCAGATGGAGTCGCTCAAGTCGGATCTGTCCAAGACACAGGGAGAGCTAGTGGGACTCAAGGCAGTTTCTCAAAAGTCTACAGAGCAAGTGGAAAGTATCAAAAAGGAACACCAGACACAACTGGCCAAGGTCCAACAAGAAGTGGATTCACTGAAAACTGCCGTGACAGCCAAGGAAGAAGAAGTGAATGAAAAGAATAAAACTCTCCTTCAGGTGAAGAGAATTGCACGTCGCTATAAGACGCAGGTTGATGAGCAAACCAAAGAAATGGAAGAACTGAAGAAGAAGGCTGAGGAATCCCAAACGCCAGGTGCTACTGCTGGTGCTGCTGCCCCGACCGCCACTTCTACCGCCGAGAATGCAGATGTCGCGTCTTATGAGGAAAAGATCAAACAATTAACTGATCAGGTTAACACGTCTGAGGATGAAGTCAAGAAGCTTAAAGAGCTGGATGAACAGAACAAGGTGAGTAGACTATCGCTTTCTGTCCAAGTTCGTTTTGCTTCTAGTGAAGGGGCTAGACCAGTAAACGCAACTAACGTAGTAGATGCCGTGTGTTGGCTTactctcatgaaagaaaaggaagataGAAACAAGAAAGTGTTGATTCAAGTGAGAGAGAAGCTCCAGCAGCTTGCagGTAACAAGGACAAACTGAATGTAGAAAATGAAGACCTGAGAAAGAAGTTCAAGTCTGCcagtgaagaaaaagaaagcgtCAGTCAGCAGTTAAGTGAAATGGAAATGAGATTAAAGGTGTTAAATTCACAGTTTGAAGGAAAAATAACGAGACTGGAGAAAGAGCTGAAAGAAGCCaaagaagacaaaacaaagACAGAAAAAGCAGCAGAAGATACAAAAAAGAATTTGGAAGAAAACGATTACGTTAaGACGCCAACAACAGCCGTTGTCACGTGTGCACCACAAGTTTCCTTAGTACCACCAACAGCGACAATTAAGCCCACCACGGCTCCCACGACAATCAAGCGCGCGGGACCAAAAGCTAGCGTCCGACCCATTGCAGTGGCACCAACCCAGAGCAGTCCCACCCCCACTGCCACCGTTTTACCCACGGTTACTCCCACCCCGTCGGAAGCTGTAAGTGTGGCAGGGGTCCCGAGAGTAACCGGGACAGCCATTATTTCTACGGCCAGTACGGTATCTACGTCAGTACCAACCACAGTGTCCGTCCGTCCAATTACCAGCACTGCAGAGGTGGAGCAGCAACAACGCATCGAAGGAGAGCCAGAAGTATCTTCTACGGAAGGTGCAACCACTGATCAGCCACAACCAACTCCTTCTACAGCTGTTGTGTCTGGAAAACGGCAAAGGGAAGATCCTGAAGCCACGGAAAGAACAACAGTAGAAGTTGTAGAAGGTACAAGTACAGACGACGAGCCTGTTTCAAAGAAACAGCGGACAGTCCAGTTAGATGTTGATGCGGAGGTAGGGACGTCACAAGAAAGTGTGGTGGAAGACGATGTAACAGCTGTTGAAGTAGAATCAGACGAAGAACAACTTGAAGACGACCAAAGGGATGAATGCCTCGAGGTTCCTAGCAACGAAggacagcagcagcagcaggaacaagaagtagaagaagaggaggaggcaCCTGCTTCTCCTCGTTCAGCCCTTTATGCAGAGGTTGTGTTGATCGAAAGTGACGACGGCGAAGACTATGAGGAAGGAGGAGAGGACGGAGAAGGTTATTTTGAGGACGAAGAAGGTGAAGTTGGGGAAgacgaggaggaggaagagggagAGGAATACATGGAAGAAGACACTGAAGAGGTGGGTCTTGAACAAGACGAGGAAGCGGAAGAGGTGGAAGAAGAGAAACGACATGTCGTTGAGGTTATTGTTGATGATGACGAGGAGGAGGAAATTCAAGAAGTGAAAACGACAAACGAAACACAACaagtggaggaggaggaagaagaacaaGATGACGTAGGGCAACCAGCACCTGGGCCGTTTGATGAGGCCGACGACTGTATGGTGCCTAGCACCCCAACGTTATTTGTCCCAAAGAGAACAGATGGCTTTGCAGAGATCTATTCGACGTGCGACACgaataaaaatACATCTTATACATTtgcgtttttgttttcttccacaGGGCTCCGCGTGGATGACACGCAGGTGGATCTTATGGGGGGCTCAGACGAGAGTTCCAGTGACAGACCCTCTTTTGTGGTACCTTCAGGTTTACCAGAAACCTCCGAAGCCAATACCCAGTCAAATGAAAGGCTCCCCAGCACTGGCTCCGACACAAGGCAGCTTTCAATGGAGAGCTTAGAAAGCGAGCCCGAGAGCAACAGCCTGGCAACTGTGCCCGCGATCATGGTCACGCCAGTCAGTGGACCATCCCAGAGCGTGGACGTGACGGAGGAATCCGCGGAACAAAACGTTCCAGTATCGCGGGATCACCCAGAGAGTCTGGAGGCTGAAGTTGCGGAGCTGCTGGAAGAGGTGGAACCTTTGAAGGAGGGAGAAGAAGTAACAGCTGAACAGGGAACGGAGGGGAAAGAGAGGTTAGTTCAAAAAACCCGGCAGGTATACCGCTTCATGTTTGCAGATTCAAACCGTCCCAAAGGCTCTGTGGTGCAATTGAGAAGGCCTGATACAGCGACATGGTCCACTGCAAGGGGAGGTTATCCAGTGCAAAGAGTGAAAAACCGTTTGTGTTTACTTTCGATAGGTCCCGGTACGCATCGTGGTCGTGGAACCCAGTTTGCGCGCGGTAGACAAGGCGGCGTCCCGAGAGGAGGACAAATCTGA

Transcript

ENSJQFT00000020872

Protein

ENSJQFP00000020133.1

MATSLGAELEDSLSAALEISKEVITQVASLSEDATTVLRKCNDAFDKHTSQEAKWRSDLATLRRARVNSEQQFNQVEKQLISCNAKLESEIKQHQRLQKEYEQTAASLEEKQKRLKEVEGIKEDASTNYTRVSRLNEQLESEKLELLSVVERKNQEIDRLNEEWKTMSEKLSAANATKCEAQAKLDEIENQETSFKFREKRLEQERQLMKKENEWLNEELKKRTVELVKLRKEKSSQVLQLQSQLDESNEERSCRLRIKAVTSTFLSSGSVVTTFFIYQAREQFVKMEDHYKMELGSQSKLAVLYKVQNTDDIACLLICCSCVIFLGRLDLDSKLKEQEAFHSGKAKEFEERIDKLEKKLENANDLLAAARQRGAAPLTPVELSTLSPTAAATSSFLKSGMTLTQIYSQYVEVSDALQQEKDENTRLKQYLDQILKEIEEKAPVLQQQRRDYEQALHSVDQLSRRLDVALVENEESKAFTDEALKKSEHLRRENERLRNLSADLSQQVQVLLKECEEARGGVVSSEASTFPMSSTEVTSSSQVISEHLVTFRNIEELQQQNQKLLKVVRELSEEKEKKEGDGVEAVIRQRDMYRVLLASTGQTPIPTSDIDTSMLVSTPLPKSLDKSQAELEETKVALKELQRHFESYKTDRTQSEHLNLYINLARAYTLRRPLQYQPLHCSLQLEFAEEKYKILKSNCEAFKKEATAASEKAQKLQVAYSKVQLSLDSVSQELTNTKEQSNKLEVMCENLRAEKALLKESEVRLIQENKSLLEHQKSQNAVVTNLQTLQNNLERSEFEARTRLGSQVESLQRELNLLRRKLESEEKHHKCVVSTWENRVQELQSQLNVEIKTHQQAREQLLTSTKDIDAVQLRCSQAEAQLQVCEKRVEELLNRDEGTLQEADQERIKKEITEQYAVKIQEYELKLNDAEAHVKTLEEQLQQAKQHVEQFRSMSEANEQALSDLNKVSEEFKKTTETKLKTSEQEVTELKTRVSHLQSQNQTLSASKAKITRETESQTKHLRETLGRVQAELAEALRKAQASAAAEMEAKEELKEQAQLSAEAQDKYERELVLHANDVQALTLAKEKFQEQSTKFSEMEERAVTAEQKLQEYKTSWEEQKKAKSLEAKKLEARYADLVNQNSMLHSQLEKLSGQLAAGKDSSLALPVPSKEVGEIEGTGDNNKTMEELWEIIRFLSQSESIRYQQRCEYLESQIEDMQKNLTEQRCQSATETQTAAEHADIMAKVKKLNELAERNKILADEKDRAEQKSRLLETKVQKLEGDIRPLKDSNQSLASMKDALLAEKTALKNEIIRWTAKTNQLIEQYKNVDAEEYKRMSEEKKQFQQQISTLKSDNQRMKTQMESLKSDLSKTQGELVGLKAVSQKSTEQVESIKKEHQTQLAKVQQEVDSLKTAVTAKEEEVNEKNKTLLQVKRIARRYKTQVDEQTKEMEELKKKAEESQTPGATAGAAAPTATSTAENADVASYEEKIKQLTDQVNTSEDEVKKLKELDEQNKVSRLSLSVQVRFASSEGARPVNATNVVDAVCWLTLMKEKEDRNKKVLIQVREKLQQLAGNKDKLNVENEDLRKKFKSASEEKESVSQQLSEMEMRLKVLNSQFEGKITRLEKELKEAKEDKTKTEKAAEDTKKNLEENDYVKTPTTAVVTCAPQVSLVPPTATIKPTTAPTTIKRAGPKASVRPIAVAPTQSSPTPTATVLPTVTPTPSEAVSVAGVPRVTGTAIISTASTVSTSVPTTVSVRPITSTAEVEQQQRIEGEPEVSSTEGATTDQPQPTPSTAVVSGKRQREDPEATERTTVEVVEGTSTDDEPVSKKQRTVQLDVDAEVGTSQESVVEDDVTAVEVESDEEQLEDDQRDECLEVPSNEGQQQQQEQEVEEEEEAPASPRSALYAEVVLIESDDGEDYEEGGEDGEGYFEDEEGEVGEDEEEEEGEEYMEEDTEEVGLEQDEEAEEVEEEKRHVVEVIVDDDEEEEIQEVKTTNETQQVEEEEEEQDDVGQPAPGPFDEADDCMVPSTPTLFVPKRTDGFAEIYSTCDTNKNTSYTFAFLFSSTGLRVDDTQVDLMGGSDESSSDRPSFVVPSGLPETSEANTQSNERLPSTGSDTRQLSMESLESEPESNSLATVPAIMVTPVSGPSQSVDVTEESAEQNVPVSRDHPESLEAEVAELLEEVEPLKEGEEVTAEQGTEGKERLVQKTRQVYRFMFADSNRPKGSVVQLRRPDTATWSTARGGYPVQRVKNRLCLLSIGPGTHRGRGTQFARGRQGGVPRGGQI

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07926 all species →	TPR_MLP1_2	TPR/MLP1/MLP2-like protein	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012929 all species →	Domain	Nucleoprotein TPR/MLP1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18898 all species →	NUCLEOPROTEIN TPR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005643 all species →	Cellular Component	nuclear pore	Interproscan
GO:0006406 all species →	Biological Process	mRNA export from nucleus	Interproscan
GO:0017056 all species →	Molecular Function	structural constituent of nuclear pore	Interproscan
GO:1901673 all species →	Biological Process	regulation of mitotic spindle assembly	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09291	TPR, MLP1, MLP2; nucleoprotein TPR	-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.