Gene detail

Detailed information of ENSJQFP00000020622.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation ROSCU · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000021405

TTTTGTTCATGGATTACAATTACCagcaaataattatttgaaagAGAATTATTATAGTACAGTACGTGGTAGGAAACATCCGACTGACTTGAGCCTTCATTGGTGCATCTGTGTTTTATCTGTAGTTGGtctggtcaacagcttttacTTGTCAAATTTAAGGCATCTTAGCCACTGACTGATAGAGAACAACCAGAAAGTTTTGATGTAGGGAAAAAGGGATTTAGAGACTGAAGTTACAATTAATGTGTCCAATGTGATTTATCTCAGTGACTAGTATTTGTCAGGTTGCAGGCGACATGCTATTCCAAGACAAAAACTTTGATGTGGCTCAAGTAGTCAGTTACTTTAGATCGAAGAAAGGCGACCTTGCAATTTactatgaaatgaatgaaagtgagaaaacaaacagcagaggAATCTTGGAAGTTTGCCCTGACACTAAAAgGATTCTCAAATTTTTGGAAAAGCCATCTTCAGGGGAAACCTCATCACGACTGGCCAGTGTAGTATTTTATTGTTTCCAGAAGAAAACATTGAGCACATTAAACACATTCTTAAAGGCTAGACCTGATCCTAATCAGCGTGTGTTTGGAAAATACATAGAGTGGCTAGTCGACCAAAACCCTGTTTATGCAATGAAGTTACCCACAGGATTCCAGCTCATAGGACAAGTGGGTCTAGCGGATTACGAGAAGTGGATCACATATTTTTCTGATATCACCAAGCAGAACAAGTATAAGGAGCTATTTACATCTAGGGCTTATGCAAGAGTTGGTTTGATGGGGAATCCATCAGATGGCTATCATGGTAAGACGATATCCATGTCTATTGCAAACTTTTGGGCTGAAGTGAGCATcaaagaaagtgaaaaactgGTGCTGGTACCACACCCTTTGAATGATCCAACAGAATTTGGCAGTCTTGGAGATTTATTTGGAATCAGCAGAAAAGAGGGatACTTGGGTGGATTGCGGCTACTTCAAGCAACATGTAAAACGTTTTACCAGTACTGCTCAAAACACGGgATTGCTTTGGCCAAGCGTACTTTCACGTTAAAATATGACACCAATATTCCTCGCCAAGTTGGACTGGCTGGAAGCAGTGCTATTGTCACAGCAACCCTCAGGTGTCTCATGCATTTCTTTAACTTAACGGACAAGGACATGCCTGTTCCACTGCAGCCCAAGTTTGTGTTAGATGTGGAATCAGAAGAGCTCTTTATACAAGCTGGCTTGCAGGACAGGGTCATTCAGGTCTATGAAGGGTTGGTGTATATGGATTTCAATGCTGAAATTATGGAAAAACAAGGACATGGTTCGTATGAACCCTTAGATTCAAGTTTAGCTCCGCCCTTGTGGTTGGCATACTTCAGTGATCCAAGTGACTCAGGGAAAATCCACAGTAATGTTTGGCTACGATGGAACCAAGGAGACCCAGAGGTGCGTGCCGCTATGCAGACATTTGGAGAGTTAACAGACCAAGCAAGAAGCGCTTTGGAACAAAGAGATTTAACCAGATTGAAAGACCTTATGAATGACAATTTTGATTTGAGGAGAAAAATATACGGTGATGCAGCAATAGGAAAGACCAACTTGAAAATGATTGAGCTTGGACGAAAGTTTGGTTCTGCTGTCAAGTTTCCAGGAAGCGGAGGAGCTGTGATAGGCTTGTGCTTAGATGACCAGAAACTAGATGAGCTTAAGAAGGCCTACCAAGCTGAAGGATTTGTATTTTGTAAAGTGATTCCCCATTGTTAGAGTCGAAAACTCTATTAGGTGCAATCAAGTGCTTCTTTTGGTAGGGTAATACATAGACGTTGTCTTTTGTAATGTAAATTTTAGTACCTGCATTGCACTTGAGTGGTCAAGGTACTAAAAAGTATGAAACATTTGCCCGGGTGTTGTGTCTAACTAGGGTAAGGATTTTATCGGACGTAGCCAATTTTCGTTGGACACTGTCTGCTTCaataataggcgatattcgtattttcacggttggactggcactaacatgcaaccgaggctaatgcgggggaaccatttcaaattcaaacgatattccccgcacgagcctcaattgtatgctcgttccagtctaaccgtgagaatacgaataaggtcaattatccCTAACAATTGTTTCCATCTCTCTGAGAAGTTTTATCATGAACCTGCTCATACGCCATTGACGAGCATGTTTGTGCCACATATGTAAAACAGTAgaaagttctttttttaaataataacaacGGTATTTAATCATAAGTATCTGAGTTACGTGAATCACGCATTCAAACGTCCTCTCGTATTTCCATGACGAAAATTGTTTTCTATTTCCTGGTTATTGTGATATCCTGTTACGTACTATTCTTCTGTAAAAGGTTATTTTTGTGTTCCATATTCTATGATCCAGACCAAAACTAAGAAAATGACGGCAGAAAATTTTAAAATGGCACACATCTTGCCTTGTCTTcgtcatctttgatttcgtCACCTTATTTAAACggttttctttttaatgtttaGCAATTGTTCACctccactgaggtgaataattgatttgttatgCACCACAGAAGTGAACAGAATAAGATATTaatggtttattttattttttataatttgCAGTGGAACTGGTGTTGATGCAAACCTAGTCCCACAAAATAGAAATACAACCATTGAGGAGGGTGACCATAAGTACAGAAAAAGCCATTTTGAcattttgcatttgtttttatCTTCTTGATTTTCCATAGT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00288 all species →	GHMP_kinases_N	GHMP kinases N terminal domain	Family	Interproscan
PF08544 all species →	GHMP_kinases_C	GHMP kinases C terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR036554 all species →	Homologous_superfamily	GHMP kinase, C-terminal domain superfamily	Interproscan
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR053034 all species →	Family	Glucuronokinase-like	Interproscan
IPR006204 all species →	Domain	GHMP kinase N-terminal domain	Interproscan
IPR013750 all species →	Domain	GHMP kinase, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR38710 all species →	WITH PUTATIVE URIDYL PYROPHOSPHORYLASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0047940 all species →	Molecular Function	glucuronokinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16190	GLCAK; glucuronokinase	EC:2.7.1.43	Amino sugar and nucleotide sugar metabolism	ko00520	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.