Gene detail

Detailed information of ENSJQFP00000020740.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000021536

ATGATTTTCAATAAGCAGGTCGCCCACGTGCTTCATCATCAGATGACCAAACGAGAGATTCAAGATATCTTCGGTGTAACCGAACACTCACAAGTTCCCGAATATGATGTCACGGTTCCATATCTCTTAAATGATGGCAATCACCGCCGGAGAAAGAGGAGTTTACCAACCATGCAAGAGGACACCAAGCATTATAAAATGGATGTCTTTGGCCAAGAACTGCCTCTTAAGCTGTCATTAAACCGACATCTTATGTCTCCTGAATTAAGAGTGGAGGTTCAACAAGGGAATAGAAGCACAGTCTTTCATCCTCGTCTTCAAAACACTTTCTATCTTGGCAAAGTCATGAATGATCCAGTCTCTATTGTGGCCGTGAGCGACGCAGAGGGACTGAGTGGGATGATGCACCTTTCGCATGACACTCTTTTCATACAACCGTTACCTTCACATTTGGCGCGATATTCCAGAAGCAAGGCGGGTCGCCCACACATAGTATTCAAGAGTGAAGATTATGAATTCGATGAAATTTCTTCGGGATCTTCTGTCAAGATTATGGAAGCTGCAATTATAACTGATGATACAACGGCCAAGAAATATGGCGAGTCTAATATTACAACCTATCTTCTCACCTTGGGAAATATTGTGGCCGGCTTATTTCGAGACGCAAGTATCGGTGAAAAACCTATCACATATGTTGTCAGCCGTATTGTTATTGTCAACTCATCTGAGGTAAGCAGCATTACAGGACATCTAAGAGCAGCGGTGAACATCAACAACGATGTCGGATTGCAGACTGCGGGAATAATAGCTCACGAAATTGGGCACAATATGGGTGCTACACATGATAATGGGGATACCCCTCAATGCGTCAACGGTCGGTATATCATGTCCGCGGACCTTCCCCCAGGACAAAATGCATCAAGGTGGTCTTCTTGTAGTCAGCGGGAGATACAGGGATTTCTTGGGAAACGTTTATCTACAGAAACTCTGGGCAGCTGTGACGTGCTACGCTGCACGAGTGACGGTTACTCATGGACAACAAGCTCAGGGCCTCCAGCTGACGGGAGCGCTTGCGGAAAGAGAAAATGGTGTATAAAAGGAAGATGTGAGGACAACGGGCAAGCCCCAATAGATGGCGGCTGGAGCAAGTGGTCTGGCTACTCACCCTGTACTCATTCTTGCGGAGTCAGTGGggggtgtaaaaaaaaaaggggtaACACTGTAACTATAGAGTCACTTCATGACATCATTGTAGATCCCTGTGGCCTTTACTGCCGAGTTGGCAACACGGCTGCCAAATTTGGTAACGTAAAAGACGGAACCTGGAGTACCAAAAGTGGCCCCGACACCTGCATCCGAGGAAAACCCGAGGTGGTGGGTTGTGATCACATGCTGTATTCAAGAAAAAGGATAGATCGCTGTGGTGTGTGTGATGGCAAAGCTGACACATGCGTCACGGAGGCCTTCAGATTCACACAAAAAGTGACAGCACCTTTCAAATCAGCTTTAATAAAGGAACTGCCACCTGGTACAATACATGCCGAGTTCAAGAAAAGAACAGGACGAACCTACAATGTCATTGGTATACAGGATGTTTATGGAACATACCTTATCAATGTCCCGTACGCTCGGACTACCACAAAACATGAAGCTGGGGCGACCATCATCTACAAACACAACGCTTACCGGTTCAGGGATCATCTGATGATACAAGGACCCACAACCGCTTGGCTCAAAGTTGTGCTTCTACGGATACGGGAAGAAACCCAAGGGGTCGACTATTTGGTAAAACGGCCACTGTTACCAGGTGAACACTTGGCAAACCTGTCCTATGATTGGCTGGTAAAAACCGACTGGTCATCCTGTAATGAAGAGTGCGCCGGTGGTTTTAAAACTCGTGAAGTATTCTGTAGTCTAACGGAGGACAATTCAGTGGTCAGTGATTCGGCGTGTGACACAAACACCAAACCTTTGCCTTATCATGGCTGTCAACCCTTTTGTTTCACTAAACATTTCAGATGGCATGATGAATGGACGCCTTGTTCAAAAACATGCGGAGGAGGACGGCAAGTTCATGTCGTATCTTGTCGGCAAAAGGTGTCGCCTCAAGAAACAAAAACGGTGTCGGATTCCATGTGCGTTGCTGTGGAGAAACCAGTTTTAGAGCCAGACAAGTATTGCAATGTTTTAAACTGCCCCGTGCAATGGGTTGTTGTCTCACCGTGGTCCATGTGTTCAGAAACCTCTGCTCGTGGGATGATGACCCGTGAAGTTGATTGTCGACAAACCGATGAAAAAGGTTTAAGCGTCAAAGTACCGGACGTGGCATGCGCGTATCACCGCGATAAACCAGCCAACAAAATCATCTcccttcgtcagaGCGTCCAGTGTCACATAAACAATCCATGCAAGAACGGGGGTGTATGCATAGGAAATCTTCCTAAGAATCCGTGCATGTGTCCAGAGGATTTTACTGGGACTTACTGTGCAGGTAAACATCTACCCTCTTTCTCTTCTTCAGAGCGAATCTACCCATGTGATGTAAGCCCTTGTTTGAATGGAGGCACTTGTCTTAATGACAAAAATGACATGTCCATGTACCACTGCCAATGTCCGCCTTGGATAACTGGTGTTAACTGTGAAGTTTTAACTAATGCGTGTGAAAGTAGCCCCTGTCTCAATGATGGGTACTGCAGTAGTGACGTCACCGTCGATCCATCTCAGTACGCATGCGCCTGCACCACCTGGTTTACTGGCCAAAATTGTGAAGTGCAAATCTTCCCATGTGACAGTCAACCATGTCAGAACGGTGGTACATGCAATAATGATCCTCAAGATATTTCGCAATTTCATTGCACATGTCCACAATGGTTCGCCGGTGACACGTGTCAAGTGAAGCAGACAATTTGCGAAGTCAACAATCCCTGCCAGAACGGAAGAAATTGTTCCAGCGACAAAAGCAACCCAGCGGAATACACATGTGATTGCGGAGCCTGGTATACTGGAAAAAACTGTGAAGTTCAGTTATATCCATGTGACAGCCAACCTTGTGTGAATGGAGCCAAGTGTACCAATGACGTGGATGATATTTCGTCATACACATGTCTGTGTGCGAACGGGTTTAGTGGTAAAAACTGTCAAGGTTTGTcgtatatgttgtggttcaattttatccttgTTCCCATGTTCCGTAAGATCGCCTGTTTCAACACGAAGAATGAATACCTACCAGACGAACTCGGTGATTTTAGAGATAAAGTGAAGCGAAACAAACACCACGAGGTGATTTACCGCTGTGCTGAGATAGCGTTTGATAAAAACTACAAGTTTTTCGCGCTGGGATATAATGGAAGATGCAGATCAGGAGCTAATGCTCAGCACGAATACCACAAAGTATCTTCAGCTAATGAACAGAAATGCCCGCATGGAATTGGTAGGGACAAACGCATAGCTGTGTATACATTCGAACTTCTGCCAAAAATGGTCCCTCTTGGCTGCTTTGTAGAAAAGCCTAACCGCCTCCTTGATATCAAATTTGCCAGCGTTGTTAACTCATACGACAAGACAAAACCTTTCGCCACAGCGATTAAATGTGCACACATAGCACGTGACGAGGACTACGAGTATTTTGCTGTGCAGAACTTCGGTGAATGCCGAACGGGACTAAATATGGCTGATAATTATGATACATATGGGGAGGCCGACTCGGCAAAGTGTATCGACGGCGTCGGCAGCAAATGGACTAACTTTGTGTATGACCTTAAGCCTTCATATACTACACCAAGTCGATGTGATAACAAACCGTGTATGAACGGGGCAACGTGCGTACCACACTTTAATGACCCGGATAGGTATCATTGCCAGTGTGGAGATTGGTTCAACGGAGACCACTGTGAAGGCATGCTATTCacctttagtataaatactcgggtgattctacaaaatcgcgcaagtgttgttcTTTATGGAggtagaacaaacaacaaactcaacccacatgagaagtacgggaatcgaacccgggtcacagatctaggtgggaggcgagcacttcttcactgcgccaaccattcaCGCCAAAATAACTTACCTAAGAATGCACAATCAAAGGTTTGTCTGGACTATTCTAACAACCTGTATCTTACTTGCTTCACCTCAGTTCAAATATTCCCTTGTGAAAGCAACCCCTGTCAGAATGGAGCCACGTGCAGTAATGACCCTAATGACATCTCCAAGTATCATTGCCAATGTCTGGACTGGCATACTGGTATAAACTGTGAAGGCAACACATCCAATACTTGCATACTGTGCATGCGCACATGTGGAGTTAAACAGACAATTTGTGACGTGAATAACCCTTGCAAAAACGGAAGAAAATGTTCCAGTGATACAAGCAGCCCAGAGAAATACACTTGTAACTGTGGAGACTGGTTCACAGGCACAAACTGCGAAGGTACGTTTCTTCTCAAAACGTCTGAGGTAACTTGCAAACACGCTTTCTTTCAACACTACCCGTGTGACAGCCACCCTTGCACTAATGGTGCCACATGTACAAACGATCCTGAAGACGTTTCATTGTATCACTGTCACTGCACAGGTGGCTTCAGTGGCAGGAATTGTCAAGTTCCCATGTTCCGTAAGATCGCCTGTTTCAACACGAAGAATGAATACCTACCAGACGAACTCGGTGATTTTAGAGATGAAGTGAAGCGAAACAAACACCACGAGGTGATTTACCGCTGTGCCGAGATAGCGTTTGATAAAAACTACAAGTTTTTCGCGCTGGGATATAATGGAAGATGCAGATCAGGAGCTAATGCTCAGCACGAATACCACAAAGTATCTTCAGCTAGTGAACAGAAATGCCCGCATGGAATTGGTAGGGACAAACGCATAGCTGTGTATACATTCGAGTCTCTTCCCAAACCGATTCCTCTTGGATGCTACGTGGAGAGAAGAGCGCGGCTTCTAGAAATCAAACTGACAAGTTTTGCAACATCATTCGACGCAGCGAACCCACTTGACACGGTGTTAAAATGTGCTTACGTAGCACGTGACAGTGGTTACAACTACTTCGCTGTGCAGCACTTCGGTATCTGTAGAACGGGAGTAAATATAGCAACCAACTACGACGACTATGGAGAGGCTGCCCCGAAAAAATGTGTAGGAGGCGTTGGAGCATCGTATACCAATTACGTATATAAATTGAAAGAGGTGCGTTGGCTTCAAAACTTTTTGGCCTTGAGTTTGTCATTAAGTCTTCTATCAGAAttatccatcatcatcattttcactgAGGTGTCTACCAGAACTGAATGTGCGGGTAGATTGATTAAACATACCGTATACGAACCCGAATCTAATTCTAAAGTCATGCCAATGTTGGGTAAATGCCGGATACACTAA

Transcript

ENSJQFT00000021536

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13688 all species →	Reprolysin_5	Metallo-peptidase family M12	Family	Interproscan
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan
PF01562 all species →	Pep_M12B_propep	Reprolysin family propeptide	Family	Interproscan
PF19030 all species →	TSP1_ADAMTS	Thrombospondin type 1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR000884 all species →	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR051022 all species →	Family	Notch Signaling and Cell Fate Determination	Interproscan
IPR036383 all species →	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR001590 all species →	Domain	Peptidase M12B, ADAM/reprolysin	Interproscan
IPR002870 all species →	Domain	Peptidase M12B, propeptide	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24049 all species →	CRUMBS FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007157 all species →	Biological Process	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	Interproscan
GO:0032991 all species →	Cellular Component	protein-containing complex	Interproscan
GO:0045197 all species →	Biological Process	establishment or maintenance of epithelial cell apical/basal polarity	Interproscan
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000020740.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.