Gene detail

Detailed information of ENSJQFP00000021335.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04406 all species →	TP6A_N	Type IIB DNA topoisomerase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002815 all species →	Family	Spo11/DNA topoisomerase VI subunit A	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR013048 all species →	Family	Meiotic recombination, Spo11	Interproscan
IPR013049 all species →	Domain	Spo11/DNA topoisomerase VI, subunit A, N-terminal	Interproscan
IPR036078 all species →	Homologous_superfamily	Spo11/DNA topoisomerase VI subunit A superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10848 all species →	MEIOTIC RECOMBINATION PROTEIN SPO11	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000228 all species →	Cellular Component	nuclear chromosome	Interproscan
GO:0000706 all species →	Biological Process	meiotic DNA double-strand break processing	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003918 all species →	Molecular Function	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	Interproscan
GO:0005694 all species →	Cellular Component	chromosome	Interproscan
GO:0007131 all species →	Biological Process	reciprocal meiotic recombination	Interproscan
GO:0042138 all species →	Biological Process	meiotic DNA double-strand break formation	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006259 all species →	Biological Process	DNA metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000021335.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.