Gene detail

Detailed information of ENSJQFP00000021682.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000022517

ATGCCGGGCACAACAGCAGAGTATGCGGAAAGTCCACCGGTTTCACCGCCACAACAAGCGAATAGGAAACCCTCACGTAATCGTCTTGCTTGCCAAATTACACTGCTCGATGGCACGGTTCTGACCACCGATCAGATGCAAAAAAGCGCCAAGGGCCTGGATCTTATGCTTTGGGTTACAAGACAACTAAATATTACTGAGAAAGAGTATTTTGGGCTGCTCTGGGAAGACAAGAAGGGTGAAAAGTACTGGCTCGACCCGCAGAAGAAAATAACCACTCAGTTGAAAGGTGCAGCTCCCAACTTTGCTTTTGCTGTCAAGTTCTATGAACCTGTTCCATCACAAATCAAGACAGACTATACAAGGTATCTGATGTGTATGCAGATTAGAGATGACATAAACTCTGGAAGATTACCTTGTACATTTGGCAACCAAGCTGTTCTTGGATCCTACATTGTTCAAGGTGATATGGGGGATTTTGAACCTCATGAACATGGTGACAGCTACCTAGATGGAATGATCTTCTCACCTAACCAGACTCAAGAACTGTTGGAAAAAATCAAAGAGCTTCACCAAGAGAACAGAGGCCTGAGTCCTGAAGAAGCTGACCTGCAGTACTTAAAGATTGCATCAGGGAAGCTGATTATGTATGGTGTTGATTCACATCCAGCCTGGGATGAGCATGGTGATGAAGTACTTGTGGGTGTATCACATGATGGGCTTGCTATATATAAGGACAGGCTGGTGGTAAACAAGTTTCCATGGGCAAAGATAGATTACTTCAAGTACCGAAAAAGAAATTTCATAATTAAAAGCCACCCAGGAGAGCTGGATACCTTGACAACCATAACTGTGTACAAGTGTCCAAGTGAGAAGGCAGCCAAACGATTGTACAAGACATCTGTGGAACACCACACCTTCTTCAGGCTGACATTTGCTGATCCTCCACCATCCCGTAGTGGCTCGCTGCTGAAGATGGGTTCAAAGTTTCGCTATAGTGACCGTACCTTGTACCAAATGCGCAAAGATGGTGAACCAATTAAGAACCAGCCCAGGTTTGAACGTGTTTCAAGCAGGAACTGGTCTCGTCGTTACCAAATGCCTTCCCTCTCGGAAACTAGAATATATGTtgatgacaaggatgatgaaAACAAGGCAAAGAGGCCTCTTTCTGAGGGAGATTTACCCTCAAATGTGCCTTTGTATGCAAAAGTACATAAGAAACAGGCTCCGTTAATAGAGGAAGAGTCTATGGCAACGATGACTCCTGAGGAGCGTGAACAGTATCAACGAAAAGTAGTTGAAAAGTTTGGTAAGCAGAGCCCAGCTGAAGGTGACAAAGATGATGACACCATCAGAGCATCTGCTGTTGGGGGGGGAGTGTCTTATGCATATGGCACAGTGAAAGAAACAGACGGAAGTGCTAAAGTTAGAGCTCTAGAGGAAGAAGCCAGGAGGCGTGAAAAAGACAGAAAAGAACAAGAGCAACGTGAACAAGATCGTCTTGAGCAGGAACGTCTTGCTAAGGAGCGTGAAAGGGAACGCCAGTTGCAAGAGTGGATTGAAAGTGAAAAGAGCAGATTTAAACCAGAGGTTGCAGGAATGGCCTACACTGCTCCTGGTGGAACTTTTAAAAGGGCCAATATCACCATAGAAGAACCTAAGAAGGAGGAGCCTGAGTTTGTGAGCATGGGTGTGGCAACCCCTGTGACTGGAGGGGACACCATCAAGAGGGCAAAGACGAAAGTTGCTGACACTGATACCTACCAGGGTAGAGTGGTGAAGATGTCTGATGTAGACAAGTCACAAAACAGCCCTGAGATTTCAAGAACCAATACCTGGGGTGGTGGAAACAAAGATAGTGTATCTTCATATGGTCGTTCCTACACAAGTTCAACCTTGCCTGGCCGTGTTACTAGAACAACATATGAAACCAGTGTACGCCCTGATGATGACAGACGGCGAAGTGCAGATGACCTGCTGGATGACAATGGACGAGAAAATCACAATCGTCAAGGTGGAGGAAAAGTACCTCTGGTGACCAAAGAAGAGTTGGTAAGGATCTATTCTCCAGGATCTGCAGAGCTTGATACTCTAGATAAACCAAAGGATCCACAACATGAGATCAAGAGGTCTCTAAAGGATGACCTGAACCTCCAACATGAACAAGGGGAGGGTGGCTTTGTCCGTGAGAGTATCAAGCTCAATGAAGGTCTCATCAAGCGACAGTCTATGAGGAATGATGAGCCACCAGAAGTTACCACCACAACCATGATTATTGACAATGAGAGGGCTCCACAGGTATATCGGCAAACCCAGGTGCCAGAAGTGACCACCCATGTTATGCATATCAACAGTGCTGGTCGTCAAAAACCAGAGTCAAGAGAAGAGAGAGAAACACAGGATGGTGGTGTTCTGGTCACACGTACCATTACCATGGGTGGTGCGGAGCCTGTGACAACAGAAACTATTCGCCAGACAACAATGCCAACAGAGATTATCCAGAAGACAATTACCATAGAAGGAGATGGCGAACAGCTGACAGCACAGGAATTAAAAGATATCATAGCCCAACATGCTGGTGACCTGGGAACTAGTGAAGTTGTCACCACTACTTACACCACAAAGGTGCAAGAGGTTAAACAGACCAAGACAGTTACTGAGACCATGAGGGTGGTGGATGATGAGGGAAACATCATCAAAACCGGAGACCCAGATACAGATGCGGCAATAATGGAAGCCATTGAGCGAGCCAAACAAGAGAACCCCAACATGAAAGTCACAGAAGTTGTAATCACCAGAACTGATGAAACTACAGCTTAA

Transcript

ENSJQFT00000022517

AAAAAAGTTAAATATTCACACAATGTAATGACTAAAATAAACTCTGTTCTTGCGTAGCCATGGTTTGGGCCTATCTCGCCAACGGCTACCTAACGTTGGCTTACGCTGGTTGTGCAGAAAACAACATCCAGATTTTGAAAAAGAGTTGAGGTGGACAAAATGCCGGGCACAACAGCAGAGTATGCGGAAAGTCCACCGGTTTCACCGCCACAACAAGCGAATAGGAAACCCTCACGTAATCGTCTTGCTTGCCAAATTACACTGCTCGATGGCACGGTTCTGACCACCGATCAGATGCAAAAAAGCGCCAAGGGCCTGGATCTTATGCTTTGGGTTACAAGACAACTAAATATTACTGAGAAAGAGTATTTTGGGCTGCTCTGGGAAGACAAGAAGGGTGAAAAGTACTGGCTCGACCCGCAGAAGAAAATAACCACTCAGTTGAAAGGTGCAGCTCCCAACTTTGCTTTTGCTGTCAAGTTCTATGAACCTGTTCCATCACAAATCAAGACAGACTATACAAGGTATCTGATGTGTATGCAGATTAGAGATGACATAAACTCTGGAAGATTACCTTGTACATTTGGCAACCAAGCTGTTCTTGGATCCTACATTGTTCAAGGTGATATGGGGGATTTTGAACCTCATGAACATGGTGACAGCTACCTAGATGGAATGATCTTCTCACCTAACCAGACTCAAGAACTGTTGGAAAAAATCAAAGAGCTTCACCAAGAGAACAGAGGCCTGAGTCCTGAAGAAGCTGACCTGCAGTACTTAAAGATTGCATCAGGGAAGCTGATTATGTATGGTGTTGATTCACATCCAGCCTGGGATGAGCATGGTGATGAAGTACTTGTGGGTGTATCACATGATGGGCTTGCTATATATAAGGACAGGCTGGTGGTAAACAAGTTTCCATGGGCAAAGATAGATTACTTCAAGTACCGAAAAAGAAATTTCATAATTAAAAGCCACCCAGGAGAGCTGGATACCTTGACAACCATAACTGTGTACAAGTGTCCAAGTGAGAAGGCAGCCAAACGATTGTACAAGACATCTGTGGAACACCACACCTTCTTCAGGCTGACATTTGCTGATCCTCCACCATCCCGTAGTGGCTCGCTGCTGAAGATGGGTTCAAAGTTTCGCTATAGTGACCGTACCTTGTACCAAATGCGCAAAGATGGTGAACCAATTAAGAACCAGCCCAGGTTTGAACGTGTTTCAAGCAGGAACTGGTCTCGTCGTTACCAAATGCCTTCCCTCTCGGAAACTAGAATATATGTtgatgacaaggatgatgaaAACAAGGCAAAGAGGCCTCTTTCTGAGGGAGATTTACCCTCAAATGTGCCTTTGTATGCAAAAGTACATAAGAAACAGGCTCCGTTAATAGAGGAAGAGTCTATGGCAACGATGACTCCTGAGGAGCGTGAACAGTATCAACGAAAAGTAGTTGAAAAGTTTGGTAAGCAGAGCCCAGCTGAAGGTGACAAAGATGATGACACCATCAGAGCATCTGCTGTTGGGGGGGGAGTGTCTTATGCATATGGCACAGTGAAAGAAACAGACGGAAGTGCTAAAGTTAGAGCTCTAGAGGAAGAAGCCAGGAGGCGTGAAAAAGACAGAAAAGAACAAGAGCAACGTGAACAAGATCGTCTTGAGCAGGAACGTCTTGCTAAGGAGCGTGAAAGGGAACGCCAGTTGCAAGAGTGGATTGAAAGTGAAAAGAGCAGATTTAAACCAGAGGTTGCAGGAATGGCCTACACTGCTCCTGGTGGAACTTTTAAAAGGGCCAATATCACCATAGAAGAACCTAAGAAGGAGGAGCCTGAGTTTGTGAGCATGGGTGTGGCAACCCCTGTGACTGGAGGGGACACCATCAAGAGGGCAAAGACGAAAGTTGCTGACACTGATACCTACCAGGGTAGAGTGGTGAAGATGTCTGATGTAGACAAGTCACAAAACAGCCCTGAGATTTCAAGAACCAATACCTGGGGTGGTGGAAACAAAGATAGTGTATCTTCATATGGTCGTTCCTACACAAGTTCAACCTTGCCTGGCCGTGTTACTAGAACAACATATGAAACCAGTGTACGCCCTGATGATGACAGACGGCGAAGTGCAGATGACCTGCTGGATGACAATGGACGAGAAAATCACAATCGTCAAGGTGGAGGAAAAGTACCTCTGGTGACCAAAGAAGAGTTGGTAAGGATCTATTCTCCAGGATCTGCAGAGCTTGATACTCTAGATAAACCAAAGGATCCACAACATGAGATCAAGAGGTCTCTAAAGGATGACCTGAACCTCCAACATGAACAAGGGGAGGGTGGCTTTGTCCGTGAGAGTATCAAGCTCAATGAAGGTCTCATCAAGCGACAGTCTATGAGGAATGATGAGCCACCAGAAGTTACCACCACAACCATGATTATTGACAATGAGAGGGCTCCACAGGTATATCGGCAAACCCAGGTGCCAGAAGTGACCACCCATGTTATGCATATCAACAGTGCTGGTCGTCAAAAACCAGAGTCAAGAGAAGAGAGAGAAACACAGGATGGTGGTGTTCTGGTCACACGTACCATTACCATGGGTGGTGCGGAGCCTGTGACAACAGAAACTATTCGCCAGACAACAATGCCAACAGAGATTATCCAGAAGACAATTACCATAGAAGGAGATGGCGAACAGCTGACAGCACAGGAATTAAAAGATATCATAGCCCAACATGCTGGTGACCTGGGAACTAGTGAAGTTGTCACCACTACTTACACCACAAAGGTGCAAGAGGTTAAACAGACCAAGACAGTTACTGAGACCATGAGGGTGGTGGATGATGAGGGAAACATCATCAAAACCGGAGACCCAGATACAGATGCGGCAATAATGGAAGCCATTGAGCGAGCCAAACAAGAGAACCCCAACATGAAAGTCACAGAAGTTGTAATCACCAGAACTGATGAAACTACAGCTTAATTTTAACTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09380 all species →	FERM_C	FERM C-terminal PH-like domain	Domain	Interproscan
PF00373 all species →	FERM_M	FERM central domain	Domain	Interproscan
PF09379 all species →	FERM_N	FERM N-terminal domain	Domain	Interproscan
PF05902 all species →	4_1_CTD	4.1 protein C-terminal domain (CTD)	Domain	Interproscan
PF08736 all species →	FA	FERM adjacent (FA)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000299 all species →	Domain	FERM domain	Interproscan
IPR018980 all species →	Domain	FERM, C-terminal PH-like domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR035963 all species →	Homologous_superfamily	FERM superfamily, second domain	Interproscan
IPR014847 all species →	Domain	FERM adjacent	Interproscan
IPR019748 all species →	Domain	FERM central domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR019749 all species →	Domain	Band 4.1 domain	Interproscan
IPR018979 all species →	Domain	FERM, N-terminal	Interproscan
IPR008379 all species →	Domain	Band 4.1, C-terminal	Interproscan
IPR014352 all species →	Homologous_superfamily	FERM/acyl-CoA-binding protein superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23280 all species →	4.1 G PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0005198 all species →	Molecular Function	structural molecule activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23961	EPB41L1_2_3; band 4.1-like protein 1/2/3	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.