Gene detail

Detailed information of ENSJQFP00000022158.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

ENSJQFT00000023033

ATGCAATCAGCTGACTCTTCTGAACAGGAAGACAATGTTTCTTGTGACTTGGTTGAGATTACAGCCGTCACAAATTCTACTTCTAATCAACCAGACACAGCGCAGGAGAAGAAACCCGTAGAAAACGTCACACCTCCCCCTGTTAGACCTCCACGTCGTAGCAGGACAGAGAGACGGTCACGGACAGTAGGTTCACCAAAGCGACTGAAGGCTCCTGTGGATGTTGGAGATGATGAAGTAtttggaaaagaagaaaagggaAATGAAGGGGACTCCAACATACTTACTCGCTCATCAGAAATTAAACGGTTACCCCGTAGGAGTGATAGTGAACCAGTTCGACCACGTAGTCAAAGTGTAGATAATGAAGAACAGAAGAAACTGCGCAAGGCACGAGGCTCTCATGTTGTTTTCGATGAGAGTAATGTTGATTTTCTATCATCTCCAGTTGCATCCCCCCAAGGAAGTCCTGCAAAACAGTTTTCCCCTTCTTCTTGGGATTCTGGTGCTGACGACACAGCCCAGAAATTGCATAGAAGAAAGTGGGTAGTAGCTGCCGTTCTGGACAGTGAGAAGGGGTACCTGGAATGCCTACATTTGTTGTACAAGCATATGAAGCCGCTTGAGTTATCTATTGAGTCATCAGCTCCAATTTTGTCGCTTTCTGACTTCAACAACATCTCCTTCAAGTTGGATGAGCTTTATGCTATTCACTCAGTGTTTTATAATGACCTGGAGGCACGCATGTCTCACTGGACAGACAGACATCTTATTGGGGATTTATTTTTGTCACTGGTGGACCAGTTTGACGTGTACAGGGAGTACATATTAAACTGCAAGACAGCTCTGGAGACAATAAGGAAGTGCAAGGGTATTAATGAACAGTTCAACGATATCTTCTCCAAGGAACTCAGGGTGAATTCTATCCAAGAAGTCACAACACTAGAAGGGCTTTTTAGCAAGCCAGTGGATCGAGTTGGgagatacattgtggttctcaATGATTTGATCAAACAAACTCCAACAGATCATGCTGATTTTGAACTTTTGACGAGTGTGCTGCATGCCACACAGGAGTTTCTGGGAAGAATTAGCGGTGACCATAGAGATGGCCCTAGCATTACACGGGCGAAGAGAGATCACAGACTTATCAAAGATGGCTTCCTTGTGGAACTGGCAGATGGAGTTCGTAAATTCAGACATCTCTTCTTGTTCAACGATTATGTCATTTGCACAAAGCGAAAAATTAGTGCCAGGAGTGAGCAGTATGCATGTAAGTGGTTCATCCCGCTGAGTGAATTACAATTTCACCCGTCTGAGTTCTCAGAAGctcCACAGGTTGTCCCTGTAACAAGTAACGCTGATTTCGATTTGCTTAAGAGTAGAATTGCGAATACAAAGGCAGAGATTCGCCGTGAGGAGGGAGTCAGTGGTTACCACAGCCCGGACTCATCACCCTCGAGCAAGCGCCGCCGTGCGCAGTCAACCAACAAGGCTgtggaaaaactgaaaaagagaCTGGCTGAACAGGAAGCAGCTTTCTTGCTAGCTATTCCCAGTCTTCCTCTGACGCTCTATCACAAGCAAGGCAAGACATACACATTACTTTGCAAGAGTGACGTTGAAAGGGCGGATTGGAAGGAAGCAATCATCTCTCTCTTAAACCAGAATCAAGGTAATCCTTCCTACGTTGGCCAGCTCACGGTCATTGAGTTACATCATTTGTTAGAAGCGTGcaaaaagCTAAGGACGTGCAGAACGTTGGGAAAAGTGTCCATGACAGAAGACAGTGGACTTTTGAACGGAGTCATCTGCCTACAGATTCACTCTGGCAGAGGATTCCATAAAAACGATCTGTACTGCGTGGTTGAGGTCGATCACTATGGCCAGTTTGTCAGGAAGGCAAAGACCAGAACTTGTAAGGCCGCCAGCGATCCGGTTTGGGAACAGGACTTTGATATTGAAGTTGAAGGAACGAGAGAAATGAAAATACACGTGTATTGCAAGAGCAGACTCAATCGAGATGAGCACTGCGCTCAGGGGAGGATTGAGcTGCTCAAAGAAAACCTTCTTGGGCTGACGAAACAAACGATCACAATTACTTTGGACAAGCAGGGCGCCATTACCTTGTCGTTGCAGTATTCCAAGACTCCACACGGACTCCAGAGAAAGAAGTCTCTCAGTGAGAAGGGCGTTTTTGGAGTTGATATCACAACTGTTTCCAGGCGCGAGGAAAGTGAAATTCCTTTGATCGTTATTGGATGTGTGCAGGAAATCGAAAAGAGAGGTATGGATGAAGTGGGAATCTATCGACTATCTGGCGCCTCTTCTGATGTCCGGAAACTTAAAGACGCCTTTGATAACAACAGCCAAAGTGCCCTTGTGCAAGTGGCTGAGGCAGATATCCACGCAGTAGCTGGACTCTTAAAAATGTACCTTAGAGATCTTCCTGAACCGCTTTTCACAGACGATCTTTATCCACGATTCGTTGAAGCAAACAGAATAAAAGATCctgataaaaagaaagaaaagatgatGGGCCTCTTCGAATCGTTGCCAACTCCGAACCGTCTGACGAGCATCTATTTAATGGACCATCTCAGAAGATTAAGCGAACATTCCGAGCAGAACAAGATGGGGCTCAATAACTTGGCGACCGTGTTCGGTCCCAATATTCTCCGCCCGTCGGCCTCCAGCAGGACTGATCCCCAGGACCTCGCACAAGGAACACTGGACGTCATGAGCCAAGTCAGTATCTTCCTTTGGTTCGTCAAGTTTTGTTCGCTTCAGCTTCCCGCGGATCCAGAGCTAAGGCACAGACTGCACCCAAGAAGAGGCTCCGATGTGTCGCACTCGCAAGAGTTTTCAGAGTATGAAGACAGACTGATTTAA

Transcript

ENSJQFT00000023033

GTCCTTGGGCCATAGATGTAGCAGCATCTGAAATGCAATCAGCTGACTCTTCTGAACAGGAAGACAATGTTTCTTGTGACTTGGTTGAGATTACAGCCGTCACAAATTCTACTTCTAATCAACCAGACACAGCGCAGGAGAAGAAACCCGTAGAAAACGTCACACCTCCCCCTGTTAGACCTCCACGTCGTAGCAGGACAGAGAGACGGTCACGGACAGTAGGTTCACCAAAGCGACTGAAGGCTCCTGTGGATGTTGGAGATGATGAAGTAtttggaaaagaagaaaagggaAATGAAGGGGACTCCAACATACTTACTCGCTCATCAGAAATTAAACGGTTACCCCGTAGGAGTGATAGTGAACCAGTTCGACCACGTAGTCAAAGTGTAGATAATGAAGAACAGAAGAAACTGCGCAAGGCACGAGGCTCTCATGTTGTTTTCGATGAGAGTAATGTTGATTTTCTATCATCTCCAGTTGCATCCCCCCAAGGAAGTCCTGCAAAACAGTTTTCCCCTTCTTCTTGGGATTCTGGTGCTGACGACACAGCCCAGAAATTGCATAGAAGAAAGTGGGTAGTAGCTGCCGTTCTGGACAGTGAGAAGGGGTACCTGGAATGCCTACATTTGTTGTACAAGCATATGAAGCCGCTTGAGTTATCTATTGAGTCATCAGCTCCAATTTTGTCGCTTTCTGACTTCAACAACATCTCCTTCAAGTTGGATGAGCTTTATGCTATTCACTCAGTGTTTTATAATGACCTGGAGGCACGCATGTCTCACTGGACAGACAGACATCTTATTGGGGATTTATTTTTGTCACTGGTGGACCAGTTTGACGTGTACAGGGAGTACATATTAAACTGCAAGACAGCTCTGGAGACAATAAGGAAGTGCAAGGGTATTAATGAACAGTTCAACGATATCTTCTCCAAGGAACTCAGGGTGAATTCTATCCAAGAAGTCACAACACTAGAAGGGCTTTTTAGCAAGCCAGTGGATCGAGTTGGgagatacattgtggttctcaATGATTTGATCAAACAAACTCCAACAGATCATGCTGATTTTGAACTTTTGACGAGTGTGCTGCATGCCACACAGGAGTTTCTGGGAAGAATTAGCGGTGACCATAGAGATGGCCCTAGCATTACACGGGCGAAGAGAGATCACAGACTTATCAAAGATGGCTTCCTTGTGGAACTGGCAGATGGAGTTCGTAAATTCAGACATCTCTTCTTGTTCAACGATTATGTCATTTGCACAAAGCGAAAAATTAGTGCCAGGAGTGAGCAGTATGCATGTAAGTGGTTCATCCCGCTGAGTGAATTACAATTTCACCCGTCTGAGTTCTCAGAAGctcCACAGGTTGTCCCTGTAACAAGTAACGCTGATTTCGATTTGCTTAAGAGTAGAATTGCGAATACAAAGGCAGAGATTCGCCGTGAGGAGGGAGTCAGTGGTTACCACAGCCCGGACTCATCACCCTCGAGCAAGCGCCGCCGTGCGCAGTCAACCAACAAGGCTgtggaaaaactgaaaaagagaCTGGCTGAACAGGAAGCAGCTTTCTTGCTAGCTATTCCCAGTCTTCCTCTGACGCTCTATCACAAGCAAGGCAAGACATACACATTACTTTGCAAGAGTGACGTTGAAAGGGCGGATTGGAAGGAAGCAATCATCTCTCTCTTAAACCAGAATCAAGGTAATCCTTCCTACGTTGGCCAGCTCACGGTCATTGAGTTACATCATTTGTTAGAAGCGTGcaaaaagCTAAGGACGTGCAGAACGTTGGGAAAAGTGTCCATGACAGAAGACAGTGGACTTTTGAACGGAGTCATCTGCCTACAGATTCACTCTGGCAGAGGATTCCATAAAAACGATCTGTACTGCGTGGTTGAGGTCGATCACTATGGCCAGTTTGTCAGGAAGGCAAAGACCAGAACTTGTAAGGCCGCCAGCGATCCGGTTTGGGAACAGGACTTTGATATTGAAGTTGAAGGAACGAGAGAAATGAAAATACACGTGTATTGCAAGAGCAGACTCAATCGAGATGAGCACTGCGCTCAGGGGAGGATTGAGcTGCTCAAAGAAAACCTTCTTGGGCTGACGAAACAAACGATCACAATTACTTTGGACAAGCAGGGCGCCATTACCTTGTCGTTGCAGTATTCCAAGACTCCACACGGACTCCAGAGAAAGAAGTCTCTCAGTGAGAAGGGCGTTTTTGGAGTTGATATCACAACTGTTTCCAGGCGCGAGGAAAGTGAAATTCCTTTGATCGTTATTGGATGTGTGCAGGAAATCGAAAAGAGAGGTATGGATGAAGTGGGAATCTATCGACTATCTGGCGCCTCTTCTGATGTCCGGAAACTTAAAGACGCCTTTGATAACAACAGCCAAAGTGCCCTTGTGCAAGTGGCTGAGGCAGATATCCACGCAGTAGCTGGACTCTTAAAAATGTACCTTAGAGATCTTCCTGAACCGCTTTTCACAGACGATCTTTATCCACGATTCGTTGAAGCAAACAGAATAAAAGATCctgataaaaagaaagaaaagatgatGGGCCTCTTCGAATCGTTGCCAACTCCGAACCGTCTGACGAGCATCTATTTAATGGACCATCTCAGAAGATTAAGCGAACATTCCGAGCAGAACAAGATGGGGCTCAATAACTTGGCGACCGTGTTCGGTCCCAATATTCTCCGCCCGTCGGCCTCCAGCAGGACTGATCCCCAGGACCTCGCACAAGGAACACTGGACGTCATGAGCCAAGTCAGTATCTTCCTTTGGTTCGTCAAGTTTTGTTCGCTTCAGCTTCCCGCGGATCCAGAGCTAAGGCACAGACTGCACCCAAGAAGAGGCTCCGATGTGTCGCACTCGCAAGAGTTTTCAGAGTATGAAGACAGACTGATTTAACATCTCGCTTTGACCACTACAAAGCTTGGTCTCCGCTCAGTGCCAAGTGTCATGCGTACAAGAGTCAGGCGTCGGAAGTTTGTGACGCATGGCAGGTTGCTCTGTAAGTCTTTGACTATCAAACAGCCATGACTAAAACATTGACAAAAagtccaaaaaatcatttcggttaatattgaaacaaaaccgCGCTACATTGAAAttatgttcagtagcttaccaaatAATGATTTACATGGTTTGATGGTTAGCACCACCCGGCATCACagaataaacaacaccacatgaaagtactgttcagtagatttccgaagtcacactgtatggtttgatccacagactaaaagcttACACCCACATTTTctcacaaactaaacagcaccgcatgaacatactgttcagtagctttccaaagaatggtcacactgcatggttttatacacagactaaaagttagaaccgcactgtaacacaaaacaaacagcaccacatgaaagtcctgttcagtagcttttcaaacaatgctcacactgcatggttaaatccacagactaaaagcttacacccacactgtaacacaaaacaaacagcaccacatgaaagtactgttcagtagcttttcaatcaatgctcacactgcattgttttatacacagactaaaagttagaaccacactgtatcacaaaacaaacagcaccacatgaaagtactgt

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00621 all species →	RhoGEF	RhoGEF domain	Domain	Interproscan
PF19057 all species →	PH_19	PH domain	Domain	Interproscan
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR000219 all species →	Domain	Dbl homology (DH) domain	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR035899 all species →	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR037769 all species →	Family	Abr/Bcr	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23182 all species →	BREAKPOINT CLUSTER REGION PROTEIN BCR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0043547 all species →	Biological Process	positive regulation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08878	BCR1, BCR; breakpoint cluster region protein	EC:2.7.11.1	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.