Gene detail

Detailed information of ENSJQFP00000022224.1 in Rhodactis osculifera

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Rhodactis osculifera · all data for this species · gene families

Sequence

CDS

Transcript

ENSJQFT00000023105

TTGACCACCGAGCTAGCAAATCGCGTCTGTCCGGTGGACTCGATAACGACCCGCGGGATCTGTCTTCTGTCCACGGGCCCATGGTTTTCTTGTGGAACAGAGAAAGCGTTCGGCTGAAACGAAGTATTTTCGTCGCTTGAAAGCCGGATGTAATGCATCCAACTGATTTGAATCGCTGGTGATTACCCTTGCCGGACAGAGATCTACCTGCAGTGCATCGTGTTAATGTCAGTTTGGGTCAAGTGTATATCTAGCAAAAGCAAGAAACGCCAGACGAAAACGCTTCTCTATCGGCGAGGATGAACGAAGGGACTTCTCGCACGTCGAGGGTTCGTTTTTCGGCAAACACCGACACGTTCAGCGAAGACGAGGAAGCAGAAATACGGCACAAGCGTCTCCTCCGTTACTGGTACAAAGGCGGAAGGAGATACAGTGAAGCGGAGAAGGCGTTTTTAAGCCGTGTGAGGATTCCGTCGGTGGGCATTGGACACGGCGAAACGAAGGTTGGATGGCTGCGGTTTTTTGACCCTGGAGgTGACCGCCTTTACTATTGGCTTCTGATAGTCTCTGCAGCGGTCATGTACAATTCATGGGTTCTAATATTAAGGACTTCGTTCCCAGAACTTCACAAAAGGCACGAAATAGCTTGGATCACGATCGACTACTTATGTGATTTGATTTACGTCCTGGACATTTTCGTAAGCTCAAGAACAGGTTACATGGAAGACGGAATCATGCAAAAGGACGTAGAGAAAATGCGACGCCACTATCTACACACGTCAGCGTTTTACATGGACGCCGCAGCCATCGTTCCACTGGACATTGTGTTCATTTTTATTGGGCATGAGCCCGCAATACGCATGAACCGCCTTATAAAGTATCACCGGTTTTGGATTTTTATGGACCGGACGGAAAGTCGCACGAGTTTTCCGAATCTCTTCAGACTCGCGTCACTGATGCAGTTCATTCTTGtcatcattcattggaatgcctGCATATATTTCATAGTGTCACGTGAAATAGGATTCGGCACGGACACGTGGGTGTATCCCGGAATATACGGGCAAACCAACTTGACTGGCAACAGCAAATCGCTCACGAGAAAATATATCTATTCTTTCTATTGGTCTACTCTAACGTTGACTACGATTGGTGAAGTGCCGCCACCGCATACCAACCTGGAATATCTCTTTGTGACGCTCGATTATTTAATAGGAGTTCATCTGTTTGCAACGATTGTGGGCAATGTGGGTAGCATTATCACCAACCAAAACGCCGCCAAAGTGGATTTTCAAAACAAGATGGACGGCATCAAAGCATACATGCGCTTCCACAAGATTCCTCAGCACTTACAGCAACGAGTCATTAAGTGGTTCGACTACTTGTGGATGAATAAAAAACACCAAGATGAAGAGGAACTTTTGCGATCTTTGCCGGACAAACTGCGAGCCGAACTTGCAATTCATGTTCATCTAGATTCACTCAGGAAAGTCACCATATTTCAGGACTGTGAGGCGGGCTTTTTATGTGAGCTGGTTTTACGCCTTCGCCCTCAACTGTTTTCACCAGGCGACTATGTCTGCAGGAAAGGCGAGGTCGGTCGAGAAATGTACATCGTCAACAGGGGAAAGCTTGAGGTGGTCTCGGAGACCGGCACCAAAGTCTATGCCGTGTTAGAGACGGGCAGCTACTTCGGGGAGATCAGCGTCCTGTGCATGAGTAGCGCCGGAAATCGTCGCACTGCGTCGGTGCGTTCCGTTGGATACTCGGAATTGTTTTGCCTGTCGAAGAACGACCTCATGGAAGTATTAGGCGAGTACCCTGAGATTAAAACGAAGATTGAAAGCATCGCAAAACAGCGGCTGGAGAACGATAAACGCAGAACGAGTGCGCTGTTGTCGAACAAACACGGCAAAAACACGAACGGCGCGGATTCTGAACCGAAGGTGAAGAGTAAATCTTTCGCTAGACTGGAAGAAAGAATAGCTATTCTAGAGGGAGAGAAAGAGGGGATTCTGCAGGAAATGAAACGACAGAGTCAGGAATTTGCCGACAGAATAGCTGATCTGGAGGCCTCCTTGTCTCACCTGTCCCGAGAGAGGCGAAGTGAAGGTGGAAGGCCGCCTTCGCGGTCCTTTGATTTCGTGTGGAAAAGGAGGTGAAGAGCGGGCTACATTTCGGAAGCAATAACAGGAAGGAGCTGCTCTCTTTGCTTGCAACCGCTGCTGGCTTGAATGCAGGTTCATTGTTTCTGgcacagctgtcaatcaagggTGGGCTGTGTTTTAGCCACGACGAACGTCCATGggaatgaaatttaaaaatagCTTAAGGCCGAGACATGCTGTAAACAGGCTGACAAGCCAAGACGAGTAGGAAGACAAGGAGAAAGTCGGCCAAACCAAACCACACATGATCTAGTGATGGTGGCTGTGATAACACTCCATTATGGTGTATTCCACTTTTCCAACAATCTTGTTCCTCTTTTTACCGCGGTAGTTTTTAACCACTTAATAACcagtattaaaataaaaattctccttttccatcCCCATGCAATACTGGGGAGACTTTCCTACGAGATCAACAAAGTTCTTATCAAGTAATCATGTCCTTACTTCTCCTGACCTCTCTGGTTCattaaacattaatattacAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan
PF00027 all species →	cNMP_binding	Cyclic nucleotide-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR000595 all species →	Domain	Cyclic nucleotide-binding domain	Interproscan
IPR050866 all species →	Family	Cyclic Nucleotide-Gated Cation Channel	Interproscan
IPR018490 all species →	Homologous_superfamily	Cyclic nucleotide-binding domain superfamily	Interproscan
IPR018488 all species →	Conserved_site	Cyclic nucleotide-binding, conserved site	Interproscan
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR003938 all species →	Family	Potassium channel, voltage-dependent, EAG/ELK/ERG	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45638 all species →	CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005223 all species →	Molecular Function	intracellularly cGMP-activated cation channel activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0017071 all species →	Cellular Component	intracellular cyclic nucleotide activated cation channel complex	Interproscan
GO:0044877 all species →	Molecular Function	protein-containing complex binding	Interproscan
GO:0098655 all species →	Biological Process	monoatomic cation transmembrane transport	Interproscan
GO:0005249 all species →	Molecular Function	voltage-gated potassium channel activity	Interproscan
GO:0006813 all species →	Biological Process	potassium ion transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSJQFP00000022224.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.